RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 GRAMD1AQ96CP6 724 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 MTBPQ96DY7 904 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 FUT8Q9BYC5 575 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 ITGB1BP2Q9UKP3 347 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 HEY1Q9Y5J3 304 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 NCK2O43639 380 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 CIAO1O76071 339 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 ESRRBO95718 433 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 MAP4P27816 1152 aaKnown RBP11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 IMPG1Q17R60 797 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 IL17RAQ96F46 866 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 ANKRD27Q96NW4 1050 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 PUS3Q9BZE2 481 aaKnown RBP11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 SLC13A1Q9BZW2 595 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 ATP11BQ9Y2G3 1177 aa11.4□□□□□ -0.58
PKNOX1-201ENST00000291547 LRRC53A6NM62 1247 aa11.4□□□□□ -0.59
PKNOX1-201ENST00000291547 PECAM1P16284 738 aaPredicted RBP11.4□□□□□ -0.59
PKNOX1-201ENST00000291547 TMED10P49755 219 aaKnown RBP11.4□□□□□ -0.59
PKNOX1-201ENST00000291547 GPC5P78333 572 aa11.4□□□□□ -0.59
PKNOX1-201ENST00000291547 SUSD4Q5VX71 490 aa11.4□□□□□ -0.59
PKNOX1-201ENST00000291547 RWDD4Q6NW29 188 aaKnown RBP11.4□□□□□ -0.59
PKNOX1-201ENST00000291547 LMCD1Q9NZU5 365 aa11.4□□□□□ -0.59
PKNOX1-201ENST00000291547 CEP72Q9P209 647 aa11.4□□□□□ -0.59
PKNOX1-201ENST00000291547 F8W8V4 182 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 ABCD1P33897 745 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 MECOMQ03112 1051 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 KLC1Q07866 573 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 SFSWAPQ12872 951 aaKnown RBP11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 MED21Q13503 144 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 MTERF2Q49AM1 385 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 ERFEQ4G0M1 354 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 LRRC8EQ6NSJ5 796 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 GADL1Q6ZQY3 521 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 RNF25Q96BH1 459 aaPredicted RBP11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 ZBTB10Q96DT7 871 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 BPIFA3Q9BQP9 254 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 BHMT2Q9H2M3 363 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 RUBCNLQ9H714 662 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 NARFQ9UHQ1 456 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 SH2B2O14492 632 aaPredicted RBP11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 PPP1R37O75864 691 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 TTLL1O95922 423 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 IL10P22301 178 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 MAP3K10Q02779 954 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 GFPT1Q06210 699 aaPredicted RBP11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 MRPL28Q13084 256 aaKnown RBP11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 CNGA3Q16281 694 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 DOK7Q18PE1 504 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 ZNF394Q53GI3 561 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 SLC27A3Q5K4L6 730 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 CDR2LQ86X02 465 aaPredicted RBP11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 SGSM3Q96HU1 749 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 HDAC6Q9UBN7 1215 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 GGT7Q9UJ14 662 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 FBXL5Q9UKA1 691 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 KDM6AO15550 1401 aaPredicted RBP11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 M0R2C6 588 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 PRPF3O43395 683 aaKnown RBP11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 SLIT3O75094 1523 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 HIC1Q14526 733 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 SHPRHQ149N8 1683 aa11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 LBHD1Q9BQE6 289 aaPredicted RBP11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 COPG1Q9Y678 874 aaKnown RBP11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.39□□□□□ -0.59
PKNOX1-201ENST00000291547 WDR47O94967 919 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 SMARCA1P28370 1054 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 ARPP19P56211 112 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 KCTD2Q14681 263 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 LBRQ14739 615 aaKnown RBP11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 Q3C1V9 767 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 ARL6IP4Q66PJ3 421 aaKnown RBP11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 LRRC8BQ6P9F7 803 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 PATL1Q86TB9 770 aaKnown RBP11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 LONP2Q86WA8 852 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 SULF1Q8IWU6 871 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 TMEM35BQ8NCS4 154 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 MTRQ99707 1265 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 ZNF446Q9NWS9 450 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 ADGRG1Q9Y653 693 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 SETD1AO15047 1707 aaKnown RBP11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 TARSL2A2RTX5 802 aaKnown RBP11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 PDIA2Q13087 525 aaKnown RBP11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 MIS18BP1Q6P0N0 1132 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 BTNL9Q6UXG8 535 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 CATSPER1Q8NEC5 780 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 ADNPQ9H2P0 1102 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 TBC1D23Q9NUY8 699 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 AURKCQ9UQB9 309 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 TSC22D4Q9Y3Q8 395 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 hCG_1984214I3L0E3 225 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 AHCYL1O43865 530 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 CHRNA3P32297 505 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 PRAMEP78395 509 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 PTK2BQ14289 1009 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 SURF1Q15526 300 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 LRRC36Q1X8D7 754 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 SPATA21Q7Z572 469 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 ARHGAP22Q7Z5H3 698 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 ZBED8Q8IZ13 594 aa11.38□□□□□ -0.59
PKNOX1-201ENST00000291547 ZNF713Q8N859 430 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms