RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 FAM153BP0C7A2 387 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 SNX16P57768 344 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 YWHAGP61981 247 aaKnown RBP eCLIP13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 TFAMQ00059 246 aaKnown RBP13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 RPS6KA2Q15349 733 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 FAM153CQ494X1 144 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 HAUS6Q7Z4H7 955 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 RHOT2Q8IXI1 618 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 ZNF507Q8TCN5 953 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 OSGEPQ9NPF4 335 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 FAM153AQ9UHL3 310 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 RGPD2P0DJD1 1756 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 AFDNP55196 1824 aaKnown RBP13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 PHF20L1A8MW92 1017 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 SGK1O00141 431 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 GYS1P13807 737 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 ADRA2BP18089 450 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 ATICP31939 592 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 EIF3BP55884 814 aaKnown RBP13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 RNASELQ05823 741 aaKnown RBP13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 KCNA1Q09470 495 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 RFX8Q6ZV50 586 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 ZNF571Q7Z3V5 609 aaPredicted RBP13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 FGD4Q96M96 766 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 TLR10Q9BXR5 811 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 ZBBXA8MT70 800 aa13.4□□□□□ -0.27
SLC6A1-201ENST00000287766 PON1P27169 355 aa13.4□□□□□ -0.27
SLC6A1-201ENST00000287766 MARK3P27448 753 aa13.4□□□□□ -0.27
SLC6A1-201ENST00000287766 PMS2P54278 862 aa13.4□□□□□ -0.27
SLC6A1-201ENST00000287766 C2CD6Q53TS8 623 aa13.4□□□□□ -0.27
SLC6A1-201ENST00000287766 CCDC137Q6PK04 289 aaKnown RBP13.4□□□□□ -0.27
SLC6A1-201ENST00000287766 ZNF564Q8TBZ8 553 aaPredicted RBP13.4□□□□□ -0.27
SLC6A1-201ENST00000287766 ZBTB10Q96DT7 871 aa13.4□□□□□ -0.27
SLC6A1-201ENST00000287766 CALR3Q96L12 384 aaKnown RBP13.4□□□□□ -0.27
SLC6A1-201ENST00000287766 NUDCD1Q96RS6 583 aa13.4□□□□□ -0.27
SLC6A1-201ENST00000287766 GRID2IPA4D2P6 1211 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 PBX1P40424 430 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 PPP2R2AP63151 447 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 MTM1Q13496 603 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 COG2Q14746 738 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 EDRF1Q3B7T1 1238 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 PLA2G4FQ68DD2 849 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 ATP6V0A1Q93050 837 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 KIFC3Q9BVG8 833 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 PCDHAC2Q9Y5I4 1007 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 STMN1P16949 149 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 LSP1P33241 339 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 NPEPPSP55786 919 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 NAIF1Q69YI7 327 aaPredicted RBP13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 BARGINQ6ZT62 677 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 MDM1Q8TC05 714 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 GRK7Q8WTQ7 553 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 KLHL11Q9NVR0 708 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 DCCP43146 1447 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 SAT1P21673 171 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 MIIPQ5JXC2 388 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 C6orf118Q5T5N4 469 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 RNF207Q6ZRF8 634 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 CREG2Q8IUH2 290 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 AGPAT1Q99943 283 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 PNMA2Q9UL42 364 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 TRPC6Q9Y210 931 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 TTLL3Q9Y4R7 772 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 MAD1L1Q9Y6D9 718 aa13.39□□□□□ -0.27
SLC6A1-201ENST00000287766 GOLGA8MH3BSY2 632 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 INHBAP08476 426 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 TMEM191BP0C7N4 346 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 SRGAP2CP0DJJ0 459 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 ITGA4P13612 1032 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 QARSP47897 775 aaKnown RBP13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 GIT2Q14161 759 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 NPY5RQ15761 445 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 VPS72Q15906 364 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 NCAPG2Q86XI2 1143 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 SLC7A3Q8WY07 619 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 CRAMP1Q96RY5 1269 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 DCTN4Q9UJW0 460 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 MRC1P22897 1456 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 MAP2K7O14733 419 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 GIPC1O14908 333 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 CFLARO15519 480 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 CASP5P51878 434 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 SPP2Q13103 211 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 SHROOM1Q2M3G4 852 aaPredicted RBP13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 TMEM259Q4ZIN3 620 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 RINT1Q6NUQ1 792 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 SRRM1Q8IYB3 904 aaKnown RBP13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 C4orf32Q8N8J7 132 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 CHMP6Q96FZ7 201 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 BTBD6Q96KE9 485 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 AGBL1Q96MI9 1066 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 MMTAG2Q9BU76 263 aaKnown RBP13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 APEX2Q9UBZ4 518 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 ANGPTL2Q9UKU9 493 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 EXOC1LA0A1B0GW35 172 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 INO80B-WBP1J3KQ70 363 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 ASNSP08243 561 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 EEF1B2P24534 225 aaKnown RBP13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 MDH1P40925 334 aaKnown RBP13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 DYNC1I2Q13409 638 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms