RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 PPP1R11O60927 126 aaPredicted RBP14.36□□□□□ -0.11
SCAF4-201ENST00000286835 RPA1P27694 616 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 GBP1P32455 592 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 CBWD6Q4V339 395 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 CBWD3Q5JTY5 395 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 CBWD5Q5RIA9 395 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 PALB2Q86YC2 1186 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 SYT2Q8N9I0 419 aaPredicted RBP14.36□□□□□ -0.11
SCAF4-201ENST00000286835 P3H4Q92791 437 aa14.36□□□□□ -0.11
SCAF4-201ENST00000286835 RASSF9O75901 435 aa14.35□□□□□ -0.11
SCAF4-201ENST00000286835 CHADLQ6NUI6 762 aa14.35□□□□□ -0.11
SCAF4-201ENST00000286835 SPATA21Q7Z572 469 aa14.35□□□□□ -0.11
SCAF4-201ENST00000286835 RTKN2Q8IZC4 609 aa14.35□□□□□ -0.11
SCAF4-201ENST00000286835 LRRC57Q8N9N7 239 aa14.35□□□□□ -0.11
SCAF4-201ENST00000286835 HAUS1Q96CS2 278 aa14.35□□□□□ -0.11
SCAF4-201ENST00000286835 KDM4CQ9H3R0 1056 aa14.35□□□□□ -0.11
SCAF4-201ENST00000286835 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.35□□□□□ -0.11
SCAF4-201ENST00000286835 MIF4GDA9UHW6 222 aaKnown RBP14.35□□□□□ -0.11
SCAF4-201ENST00000286835 F5H6K3 240 aa14.35□□□□□ -0.11
SCAF4-201ENST00000286835 MYCLP12524 364 aaPredicted RBP14.35□□□□□ -0.11
SCAF4-201ENST00000286835 KLRC3Q07444 240 aa14.35□□□□□ -0.11
SCAF4-201ENST00000286835 CLUL1Q15846 466 aa14.35□□□□□ -0.11
SCAF4-201ENST00000286835 KIFAP3Q92845 792 aa14.35□□□□□ -0.11
SCAF4-201ENST00000286835 RNF25Q96BH1 459 aaPredicted RBP14.35□□□□□ -0.11
SCAF4-201ENST00000286835 DONSONQ9NYP3 566 aa14.35□□□□□ -0.11
SCAF4-201ENST00000286835 TRIM33Q9UPN9 1127 aa14.35□□□□□ -0.11
SCAF4-201ENST00000286835 DDR1Q08345 913 aa14.35□□□□□ -0.11
SCAF4-201ENST00000286835 FAM102BQ5T8I3 360 aa14.35□□□□□ -0.11
SCAF4-201ENST00000286835 CIAPIN1Q6FI81 312 aa14.35□□□□□ -0.11
SCAF4-201ENST00000286835 ZNF148Q9UQR1 794 aa14.35□□□□□ -0.11
SCAF4-201ENST00000286835 CHD4Q14839 1912 aa14.35□□□□□ -0.11
SCAF4-201ENST00000286835 PITPNM2Q9BZ72 1349 aa14.35□□□□□ -0.11
SCAF4-201ENST00000286835 GH2P01242 217 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 SLC12A3P55017 1021 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 COBLL1Q53SF7 1204 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 RINT1Q6NUQ1 792 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 ARHGEF18Q6ZSZ5 1173 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 MIER3Q7Z3K6 550 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 SAAL1Q96ER3 474 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 CCDC17Q96LX7 622 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 POLLQ9UGP5 575 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 HSPA6P17066 643 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 IL9RQ01113 521 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 NFIAQ12857 509 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 SHROOM1Q2M3G4 852 aaPredicted RBP14.34□□□□□ -0.11
SCAF4-201ENST00000286835 INTUQ9ULD6 942 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 EXOC1LA0A1B0GW35 172 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 TISP43B9A030 160 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 MSH4O15457 936 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 SLC10A5Q5PT55 438 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 PPP1R18Q6NYC8 613 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 PASD1Q8IV76 773 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 KLHL11Q9NVR0 708 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 FAM86B1E9PN63 330 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 EYA4O95677 639 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 FOSP01100 380 aaPredicted RBP14.34□□□□□ -0.11
SCAF4-201ENST00000286835 FAM86B2P0C5J1 330 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 PYGMP11217 842 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 ALAS1P13196 640 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 CA4P22748 312 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 SARNPP82979 210 aaKnown RBP14.34□□□□□ -0.11
SCAF4-201ENST00000286835 AGAP11Q8TF27 550 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 PWWP2AQ96N64 755 aa14.34□□□□□ -0.11
SCAF4-201ENST00000286835 CDC42EP4Q9H3Q1 356 aaKnown RBP14.34□□□□□ -0.11
SCAF4-201ENST00000286835 DDX4Q9NQI0 724 aaKnown RBP14.34□□□□□ -0.11
SCAF4-201ENST00000286835 DIS3Q9Y2L1 958 aaKnown RBP14.34□□□□□ -0.11
SCAF4-201ENST00000286835 GOLGA8SH3BPF8 625 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 GOLGA8MH3BSY2 632 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 NQO1P15559 274 aaKnown RBP14.33□□□□□ -0.12
SCAF4-201ENST00000286835 MUM1Q2TAK8 710 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 SYDE2Q5VT97 1194 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 CCT6BQ92526 530 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 KAT5Q92993 513 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 PNMA3Q9UL41 463 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 TRAF3IP3Q9Y228 551 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 CFAP73A6NFT4 308 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 A8MUI8 341 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 EML1O00423 815 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 KIF1CO43896 1103 aaKnown RBP14.33□□□□□ -0.12
SCAF4-201ENST00000286835 LRP6O75581 1613 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 ALDH5A1P51649 535 aaPredicted RBP14.33□□□□□ -0.12
SCAF4-201ENST00000286835 VAMP7P51809 220 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 LMNTD2Q8IXW0 634 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 LRRC8CQ8TDW0 803 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 MIEF2Q96C03 454 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 NACC1Q96RE7 527 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 DCTN4Q9UJW0 460 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 SGPL1O95470 568 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 CALCAP01258 141 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 BMP3P12645 472 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 CREB1P16220 341 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 SMARCA1P28370 1054 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 COILP38432 576 aaPredicted RBP14.33□□□□□ -0.12
SCAF4-201ENST00000286835 BFSP1Q12934 665 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 NAIF1Q69YI7 327 aaPredicted RBP14.33□□□□□ -0.12
SCAF4-201ENST00000286835 EPM2AIP1Q7L775 607 aaPredicted RBP14.33□□□□□ -0.12
SCAF4-201ENST00000286835 HES6Q96HZ4 224 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 MCM8Q9UJA3 840 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 IKBKGQ9Y6K9 419 aa14.33□□□□□ -0.12
SCAF4-201ENST00000286835 H0YGN5 161 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms