RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 COL11A2P13942 1736 aaPredicted RBP11.17□□□□□ -0.62
SKA1-201ENST00000285116 POLRMTO00411 1230 aaKnown RBP11.17□□□□□ -0.62
SKA1-201ENST00000285116 KIAA0391O15091 583 aaKnown RBP11.17□□□□□ -0.62
SKA1-201ENST00000285116 PSMD10O75832 226 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 CCND1P24385 295 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 BAG6P46379 1132 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 SCNN1DP51172 638 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 ALCAMQ13740 583 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 ENOX2Q16206 610 aaKnown RBP11.17□□□□□ -0.62
SKA1-201ENST00000285116 SYDE2Q5VT97 1194 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 CAPRIN2Q6IMN6 1127 aaKnown RBP11.17□□□□□ -0.62
SKA1-201ENST00000285116 ZDHHC24Q6UX98 284 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 ZNF720Q7Z2F6 126 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 LMO3Q8TAP4 145 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 ATXN2LQ8WWM7 1075 aaKnown RBP11.17□□□□□ -0.62
SKA1-201ENST00000285116 MOV10L1Q9BXT6 1211 aaKnown RBP11.17□□□□□ -0.62
SKA1-201ENST00000285116 PI4KBQ9UBF8 816 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 KCNG1Q9UIX4 513 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 PCDHA3Q9Y5H8 950 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 CCDC169A6NNP5 214 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 MEIS1O00470 390 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 CAND2O75155 1236 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 FAM13AO94988 1023 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 NQO1P15559 274 aaKnown RBP11.16□□□□□ -0.62
SKA1-201ENST00000285116 KIAA1755Q5JYT7 1200 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 TCERG1LQ5VWI1 586 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 B3GNT9Q6UX72 402 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 OTOP1Q7RTM1 612 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 C12orf50Q8NA57 414 aaPredicted RBP11.16□□□□□ -0.62
SKA1-201ENST00000285116 NEK9Q8TD19 979 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 SLCO2A1Q92959 643 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 CORO1CQ9ULV4 474 aaPredicted RBP11.16□□□□□ -0.62
SKA1-201ENST00000285116 IGSF9BQ9UPX0 1349 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 KLHL33A6NCF5 533 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 SMNDC1O75940 238 aaKnown RBP eCLIP11.16□□□□□ -0.62
SKA1-201ENST00000285116 AGTP01019 485 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 PMS2P54278 862 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 SNRPFP62306 86 aaKnown RBP11.16□□□□□ -0.62
SKA1-201ENST00000285116 BIRC2Q13490 618 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 CTTNQ14247 550 aaKnown RBP11.16□□□□□ -0.62
SKA1-201ENST00000285116 ZNF568Q3ZCX4 644 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 CERKLQ49MI3 558 aaPredicted RBP11.16□□□□□ -0.62
SKA1-201ENST00000285116 MFSD5Q6N075 450 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 HS2ST1Q7LGA3 356 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 GLYCTKQ8IVS8 523 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 LRRC34Q8IZ02 419 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 CNKSR1Q969H4 720 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 ZNF570Q96NI8 536 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 STMN4Q9H169 189 aaPredicted RBP11.16□□□□□ -0.62
SKA1-201ENST00000285116 KIF9Q9HAQ2 790 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 AGPAT3Q9NRZ7 376 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 GRHL1Q9NZI5 618 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 PSME4Q14997 1843 aa11.16□□□□□ -0.62
SKA1-201ENST00000285116 EML1O00423 815 aa11.15□□□□□ -0.62
SKA1-201ENST00000285116 MPHOSPH10O00566 681 aaKnown RBP11.15□□□□□ -0.62
SKA1-201ENST00000285116 SLITRK3O94933 977 aa11.15□□□□□ -0.62
SKA1-201ENST00000285116 MYL7Q01449 175 aa11.15□□□□□ -0.62
SKA1-201ENST00000285116 ADCY2Q08462 1091 aa11.15□□□□□ -0.62
SKA1-201ENST00000285116 FAM133BQ5BKY9 247 aaKnown RBP11.15□□□□□ -0.62
SKA1-201ENST00000285116 MIS18BP1Q6P0N0 1132 aa11.15□□□□□ -0.62
SKA1-201ENST00000285116 GJB7Q6PEY0 223 aa11.15□□□□□ -0.62
SKA1-201ENST00000285116 JAMLQ86YT9 394 aa11.15□□□□□ -0.62
SKA1-201ENST00000285116 SELENOSQ9BQE4 189 aa11.15□□□□□ -0.62
SKA1-201ENST00000285116 OSGEPQ9NPF4 335 aa11.15□□□□□ -0.62
SKA1-201ENST00000285116 FRMD4BQ9Y2L6 1034 aa11.15□□□□□ -0.62
SKA1-201ENST00000285116 ATP8A1Q9Y2Q0 1164 aa11.15□□□□□ -0.62
SKA1-201ENST00000285116 PCDHB13Q9Y5F0 798 aa11.15□□□□□ -0.62
SKA1-201ENST00000285116 DIAPH2O60879 1101 aa11.15□□□□□ -0.62
SKA1-201ENST00000285116 C6orf118Q5T5N4 469 aa11.15□□□□□ -0.62
SKA1-201ENST00000285116 AP1ARQ63HQ0 302 aa11.15□□□□□ -0.62
SKA1-201ENST00000285116 CYFIP1Q7L576 1253 aa11.15□□□□□ -0.62
SKA1-201ENST00000285116 UBL4BQ8N7F7 174 aa11.15□□□□□ -0.62
SKA1-201ENST00000285116 CD101Q93033 1021 aa11.15□□□□□ -0.62
SKA1-201ENST00000285116 AGPAT1Q99943 283 aa11.15□□□□□ -0.62
SKA1-201ENST00000285116 ELAC2Q9BQ52 826 aaKnown RBP11.15□□□□□ -0.62
SKA1-201ENST00000285116 CELF4Q9BZC1 486 aaKnown RBP11.15□□□□□ -0.62
SKA1-201ENST00000285116 DEFB129Q9H1M3 183 aa11.15□□□□□ -0.62
SKA1-201ENST00000285116 INTS9Q9NV88 658 aaKnown RBP11.15□□□□□ -0.62
SKA1-201ENST00000285116 SLC5A4Q9NY91 659 aa11.15□□□□□ -0.62
SKA1-201ENST00000285116 F5H6K3 240 aa11.15□□□□□ -0.63
SKA1-201ENST00000285116 LUC7L3O95232 432 aaKnown RBP11.15□□□□□ -0.63
SKA1-201ENST00000285116 BCRP11274 1271 aa11.15□□□□□ -0.63
SKA1-201ENST00000285116 GZMAP12544 262 aa11.15□□□□□ -0.63
SKA1-201ENST00000285116 TNFAIP3P21580 790 aa11.15□□□□□ -0.63
SKA1-201ENST00000285116 PRELPP51888 382 aa11.15□□□□□ -0.63
SKA1-201ENST00000285116 MAP2K1Q02750 393 aaPredicted RBP11.15□□□□□ -0.63
SKA1-201ENST00000285116 KCNA1Q09470 495 aa11.15□□□□□ -0.63
SKA1-201ENST00000285116 BFSP1Q12934 665 aa11.15□□□□□ -0.63
SKA1-201ENST00000285116 RBM26Q5T8P6 1007 aaKnown RBP11.15□□□□□ -0.63
SKA1-201ENST00000285116 DLK2Q6UY11 383 aa11.15□□□□□ -0.63
SKA1-201ENST00000285116 GBP7Q8N8V2 638 aaPredicted RBP11.15□□□□□ -0.63
SKA1-201ENST00000285116 PROCA1Q8NCQ7 364 aaPredicted RBP11.15□□□□□ -0.63
SKA1-201ENST00000285116 MICAL1Q8TDZ2 1067 aa11.15□□□□□ -0.63
SKA1-201ENST00000285116 AKT1S1Q96B36 256 aa11.15□□□□□ -0.63
SKA1-201ENST00000285116 ARHGEF26Q96DR7 871 aa11.15□□□□□ -0.63
SKA1-201ENST00000285116 NACC1Q96RE7 527 aa11.15□□□□□ -0.63
SKA1-201ENST00000285116 ZSWIM1Q9BR11 485 aa11.15□□□□□ -0.63
SKA1-201ENST00000285116 WDR11Q9BZH6 1224 aa11.15□□□□□ -0.63
SKA1-201ENST00000285116 ROPN1BQ9BZX4 212 aaPredicted RBP11.15□□□□□ -0.63
SKA1-201ENST00000285116 WNT8AQ9H1J5 351 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms