RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 MPP3Q13368 585 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 CUL4AQ13619 759 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 VWA3BQ502W6 1294 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 PLA2G2CQ5R387 149 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 RASIP1Q5U651 963 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 SLC30A9Q6PML9 568 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 LMNTD2Q8IXW0 634 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 SRBD1Q8N5C6 995 aaKnown RBP3.06□□□□□ -1.92
CHD1-201ENST00000284049 RNF217Q8TC41 542 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 JAM3Q9BX67 310 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 TMEM60Q9H2L4 133 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 TRIT1Q9H3H1 467 aaKnown RBP3.06□□□□□ -1.92
CHD1-201ENST00000284049 OBP2BQ9NPH6 170 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 SAGE1Q9NXZ1 904 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 TECPR2O15040 1411 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 PZPP20742 1482 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 KNDC1Q76NI1 1749 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 SETBP1Q9Y6X0 1596 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 GPR25O00155 361 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 TRIM38O00635 465 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 B3GALT2O43825 422 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 PLOD3O60568 738 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 PRAMEF4O60810 478 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 RTN3O95197 1032 aaPredicted RBP3.06□□□□□ -1.92
CHD1-201ENST00000284049 THBDP07204 575 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 ADH6P28332 368 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 GALK1P51570 392 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 MALLQ13021 153 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 MUM1L1Q5H9M0 696 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 SPRYD7Q5W111 196 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 KLHDC10Q6PID8 442 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 TTC7BQ86TV6 843 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 LRRTM4Q86VH4 590 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 RPAP2Q8IXW5 612 aaPredicted RBP3.06□□□□□ -1.92
CHD1-201ENST00000284049 KCNG4Q8TDN1 519 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 RTF1Q92541 710 aaKnown RBP3.06□□□□□ -1.92
CHD1-201ENST00000284049 STAMQ92783 540 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 TUBGCP5Q96RT8 1024 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 SLF1Q9BQI6 1058 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 CARD10Q9BWT7 1032 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 OSBPL5Q9H0X9 879 aaPredicted RBP3.06□□□□□ -1.92
CHD1-201ENST00000284049 RETREG1Q9H6L5 497 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 CHST7Q9NS84 486 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 GPR34Q9UPC5 381 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 ADGRB3O60242 1522 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 DHX29Q7Z478 1369 aaKnown RBP3.06□□□□□ -1.92
CHD1-201ENST00000284049 PTGES3LE9PB15 166 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 ENPP1P22413 925 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 GRNP28799 593 aaKnown RBP3.06□□□□□ -1.92
CHD1-201ENST00000284049 HSPA7P48741 367 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 STYK1Q6J9G0 422 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 CYP26C1Q6V0L0 522 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 MAEAQ7L5Y9 396 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 RTN4RL1Q86UN2 441 aaPredicted RBP3.06□□□□□ -1.92
CHD1-201ENST00000284049 NKAPQ8N5F7 415 aaKnown RBP3.06□□□□□ -1.92
CHD1-201ENST00000284049 TOR1AIP2Q8NFQ8 470 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 AUTS2Q8WXX7 1259 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 RRP36Q96EU6 259 aaKnown RBP3.06□□□□□ -1.92
CHD1-201ENST00000284049 GBP4Q96PP9 640 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 XPO4Q9C0E2 1151 aaKnown RBP3.06□□□□□ -1.92
CHD1-201ENST00000284049 MS4A5Q9H3V2 200 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 DDX21Q9NR30 783 aaKnown RBP eCLIP3.06□□□□□ -1.92
CHD1-201ENST00000284049 ANKEF1Q9NU02 776 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 PIH1D1Q9NWS0 290 aaKnown RBP3.06□□□□□ -1.92
CHD1-201ENST00000284049 HOXC11O43248 304 aaPredicted RBP3.06□□□□□ -1.92
CHD1-201ENST00000284049 NRP2O60462 931 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 FKTNO75072 461 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 LRIG2O94898 1065 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 RPL10P27635 214 aaKnown RBP3.06□□□□□ -1.92
CHD1-201ENST00000284049 ALDH9A1P49189 494 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 ROM1Q03395 351 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 GPR68Q15743 365 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 SFRP5Q5T4F7 317 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 PDXDC1Q6P996 788 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 CPLX2Q6PUV4 134 aaKnown RBP3.06□□□□□ -1.92
CHD1-201ENST00000284049 PDZD3Q86UT5 571 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 HEATR4Q86WZ0 1026 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 SYTL5Q8TDW5 730 aaPredicted RBP3.06□□□□□ -1.92
CHD1-201ENST00000284049 DDX17Q92841 729 aaKnown RBP3.06□□□□□ -1.92
CHD1-201ENST00000284049 TNPO1Q92973 898 aaKnown RBP3.06□□□□□ -1.92
CHD1-201ENST00000284049 GRAMD1AQ96CP6 724 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 SORBS1Q9BX66 1292 aaKnown RBP3.06□□□□□ -1.92
CHD1-201ENST00000284049 KCND1Q9NSA2 647 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 FNIP2Q9P278 1114 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 SUSD2Q9UGT4 822 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 EMC9Q9Y3B6 208 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 RIMS1Q86UR5 1692 aaKnown RBP3.06□□□□□ -1.92
CHD1-201ENST00000284049 C9orf84Q5VXU9 1444 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 GPRASP1Q5JY77 1395 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 NCK2O43639 380 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 CLTBP09497 229 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 DRD2P14416 443 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 STMN1P16949 149 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 AFMP43652 599 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 PMS2P11Q13670 270 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 NOMO1Q15155 1222 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 SURF1Q15526 300 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 LBX2Q6XYB7 198 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 TMC6Q7Z403 805 aa3.06□□□□□ -1.92
CHD1-201ENST00000284049 VWA5B2Q8N398 1253 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms