RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 TMEM134Q9H6X4 195 aa10.4□□□□□ -0.74
TRIM55-201ENST00000276573 KIAA1586Q9HCI6 787 aa10.4□□□□□ -0.74
TRIM55-201ENST00000276573 COQ4Q9Y3A0 265 aa10.4□□□□□ -0.74
TRIM55-201ENST00000276573 LRRIQ4A6NIV6 560 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 ZNF233A6NK53 670 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 BTBD19C9JJ37 291 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 KIAA0391O15091 583 aaKnown RBP10.39□□□□□ -0.75
TRIM55-201ENST00000276573 ZNF185O15231 689 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 PIGRP01833 764 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 H2AFZP0C0S5 128 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 GTF2H1P32780 548 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 LIG4P49917 911 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 CLCN6P51797 869 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 CCNA1P78396 465 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 MAP2K1Q02750 393 aaPredicted RBP10.39□□□□□ -0.75
TRIM55-201ENST00000276573 IER5Q5VY09 327 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 KRT39Q6A163 491 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 H2AFVQ71UI9 128 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 FBXO16Q8IX29 292 aaPredicted RBP10.39□□□□□ -0.75
TRIM55-201ENST00000276573 LNX1Q8TBB1 728 aaPredicted RBP10.39□□□□□ -0.75
TRIM55-201ENST00000276573 U2AF1L4Q8WU68 220 aaKnown RBP10.39□□□□□ -0.75
TRIM55-201ENST00000276573 SEMA4DQ92854 862 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 GLG1Q92896 1179 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 CCDC94Q9BW85 323 aaPredicted RBP10.39□□□□□ -0.75
TRIM55-201ENST00000276573 TMEM8AQ9HCN3 771 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 ARGLU1Q9NWB6 273 aaPredicted RBP10.39□□□□□ -0.75
TRIM55-201ENST00000276573 INTUQ9ULD6 942 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 DIS3Q9Y2L1 958 aaKnown RBP10.39□□□□□ -0.75
TRIM55-201ENST00000276573 ATP8B3O60423 1300 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 ZNFX1Q9P2E3 1918 aaKnown RBP10.39□□□□□ -0.75
TRIM55-201ENST00000276573 LRRC37A2A6NM11 1700 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 CCL15-CCL14A0A0B4J2E2 113 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 NOP56O00567 594 aaKnown RBP10.39□□□□□ -0.75
TRIM55-201ENST00000276573 EXTL3O43909 919 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 PALMO75781 387 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 TXNP10599 105 aaKnown RBP10.39□□□□□ -0.75
TRIM55-201ENST00000276573 TNFAIP3P21580 790 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 FKBP1BP68106 108 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 CKAP4Q07065 602 aaKnown RBP10.39□□□□□ -0.75
TRIM55-201ENST00000276573 CCL15Q16663 113 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 ZNF792Q3KQV3 632 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 TMEM63BQ5T3F8 832 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 SLFN12LQ6IEE8 588 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 ANKRD23Q86SG2 305 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 USP37Q86T82 979 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 CREG2Q8IUH2 290 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 MSANTD4Q8NCY6 345 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 PSPC1Q8WXF1 523 aaKnown RBP10.39□□□□□ -0.75
TRIM55-201ENST00000276573 COPS5Q92905 334 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 RPGRIP1Q96KN7 1286 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 CAPZA3Q96KX2 299 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 SPATA33Q96N06 139 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 FAM213AQ9BRX8 229 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 TLR10Q9BXR5 811 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 ANKZF1Q9H8Y5 726 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 PDGFCQ9NRA1 345 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 PCDHGC5Q9Y5F6 944 aa10.39□□□□□ -0.75
TRIM55-201ENST00000276573 PDE2AO00408 941 aaPredicted RBP10.38□□□□□ -0.75
TRIM55-201ENST00000276573 ADCY3O60266 1144 aa10.38□□□□□ -0.75
TRIM55-201ENST00000276573 TCP1P17987 556 aaKnown RBP10.38□□□□□ -0.75
TRIM55-201ENST00000276573 GCLCP48506 637 aaPredicted RBP10.38□□□□□ -0.75
TRIM55-201ENST00000276573 GPC3P51654 580 aa10.38□□□□□ -0.75
TRIM55-201ENST00000276573 MKRN3Q13064 507 aaKnown RBP10.38□□□□□ -0.75
TRIM55-201ENST00000276573 TTLL4Q14679 1199 aa10.38□□□□□ -0.75
TRIM55-201ENST00000276573 PLCB4Q15147 1175 aa10.38□□□□□ -0.75
TRIM55-201ENST00000276573 SV2AQ7L0J3 742 aa10.38□□□□□ -0.75
TRIM55-201ENST00000276573 DNAAF5Q86Y56 855 aa10.38□□□□□ -0.75
TRIM55-201ENST00000276573 GLYCTKQ8IVS8 523 aa10.38□□□□□ -0.75
TRIM55-201ENST00000276573 EXOC8Q8IYI6 725 aa10.38□□□□□ -0.75
TRIM55-201ENST00000276573 NOA1Q8NC60 698 aaKnown RBP10.38□□□□□ -0.75
TRIM55-201ENST00000276573 ATP8B4Q8TF62 1192 aa10.38□□□□□ -0.75
TRIM55-201ENST00000276573 SCFD2Q8WU76 684 aa10.38□□□□□ -0.75
TRIM55-201ENST00000276573 PRPF31Q8WWY3 499 aaKnown RBP10.38□□□□□ -0.75
TRIM55-201ENST00000276573 BRI3BPQ8WY22 251 aa10.38□□□□□ -0.75
TRIM55-201ENST00000276573 ZBTB45Q96K62 511 aaPredicted RBP10.38□□□□□ -0.75
TRIM55-201ENST00000276573 OSBPL9Q96SU4 736 aa10.38□□□□□ -0.75
TRIM55-201ENST00000276573 HAPLN2Q9GZV7 340 aa10.38□□□□□ -0.75
TRIM55-201ENST00000276573 SMARCAD1Q9H4L7 1026 aa10.38□□□□□ -0.75
TRIM55-201ENST00000276573 GBA2Q9HCG7 927 aaPredicted RBP10.38□□□□□ -0.75
TRIM55-201ENST00000276573 TOPORSQ9NS56 1045 aaPredicted RBP10.38□□□□□ -0.75
TRIM55-201ENST00000276573 ZNF446Q9NWS9 450 aa10.38□□□□□ -0.75
TRIM55-201ENST00000276573 RAB20Q9NX57 234 aa10.38□□□□□ -0.75
TRIM55-201ENST00000276573 MORF4L1Q9UBU8 362 aa10.38□□□□□ -0.75
TRIM55-201ENST00000276573 AGO2Q9UKV8 859 aaKnown RBP10.38□□□□□ -0.75
TRIM55-201ENST00000276573 HYOU1Q9Y4L1 999 aa10.38□□□□□ -0.75
TRIM55-201ENST00000276573 A0A0A6YYK5 440 aaPredicted RBP10.37□□□□□ -0.75
TRIM55-201ENST00000276573 IGKV6-21A0A0C4DH24 114 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 ZBTB42B2RXF5 422 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 TULP1O00294 542 aaPredicted RBP10.37□□□□□ -0.75
TRIM55-201ENST00000276573 NCK2O43639 380 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 STRNO43815 780 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 LDHAP00338 332 aaKnown RBP10.37□□□□□ -0.75
TRIM55-201ENST00000276573 MARK3P27448 753 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 SLC26A2P50443 739 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 GALCP54803 685 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 CLDN10P78369 228 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 MKRN4PQ13434 485 aaPredicted RBP10.37□□□□□ -0.75
TRIM55-201ENST00000276573 DRP2Q13474 957 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 CAPSQ13938 189 aa10.37□□□□□ -0.75
TRIM55-201ENST00000276573 PSMD6Q15008 389 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms