RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 H3BRJ5 948 aa12.18□□□□□ -0.46
USP53-201ENST00000274030 ZNF185O15231 689 aa12.18□□□□□ -0.46
USP53-201ENST00000274030 CTIFO43310 598 aaKnown RBP12.18□□□□□ -0.46
USP53-201ENST00000274030 KIAA1755Q5JYT7 1200 aa12.18□□□□□ -0.46
USP53-201ENST00000274030 PRAMEF18Q5VWM3 479 aa12.18□□□□□ -0.46
USP53-201ENST00000274030 ABTB1Q969K4 478 aaPredicted RBP12.18□□□□□ -0.46
USP53-201ENST00000274030 TMEM143Q96AN5 459 aa12.18□□□□□ -0.46
USP53-201ENST00000274030 NSUN4Q96CB9 384 aaKnown RBP12.18□□□□□ -0.46
USP53-201ENST00000274030 STAP1Q9ULZ2 295 aa12.18□□□□□ -0.46
USP53-201ENST00000274030 PCDHA10Q9Y5I2 948 aa12.18□□□□□ -0.46
USP53-201ENST00000274030 ANO9A1A5B4 782 aa12.18□□□□□ -0.46
USP53-201ENST00000274030 ATP9BO43861 1147 aa12.18□□□□□ -0.46
USP53-201ENST00000274030 YWHABP31946 246 aaKnown RBP12.18□□□□□ -0.46
USP53-201ENST00000274030 EN1Q05925 392 aaPredicted RBP12.18□□□□□ -0.46
USP53-201ENST00000274030 WDR72Q3MJ13 1102 aa12.18□□□□□ -0.46
USP53-201ENST00000274030 KCNV2Q8TDN2 545 aa12.18□□□□□ -0.46
USP53-201ENST00000274030 CHP1Q99653 195 aa12.18□□□□□ -0.46
USP53-201ENST00000274030 IP6K2Q9UHH9 426 aa12.18□□□□□ -0.46
USP53-201ENST00000274030 ZFP69BQ9UJL9 534 aa12.18□□□□□ -0.46
USP53-201ENST00000274030 CCDC78A2IDD5 438 aa12.18□□□□□ -0.46
USP53-201ENST00000274030 E2F6O75461 281 aa12.18□□□□□ -0.46
USP53-201ENST00000274030 DCTN3O75935 186 aa12.18□□□□□ -0.46
USP53-201ENST00000274030 NCAPHQ15003 741 aa12.18□□□□□ -0.46
USP53-201ENST00000274030 SGMS1Q86VZ5 419 aa12.18□□□□□ -0.46
USP53-201ENST00000274030 WDR24Q96S15 920 aa12.18□□□□□ -0.46
USP53-201ENST00000274030 ZBTB18Q99592 522 aa12.18□□□□□ -0.46
USP53-201ENST00000274030 CYP4F11Q9HBI6 524 aa12.18□□□□□ -0.46
USP53-201ENST00000274030 ZBTB12Q9Y330 459 aaPredicted RBP12.18□□□□□ -0.46
USP53-201ENST00000274030 WDR19Q8NEZ3 1342 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 CEP55Q53EZ4 464 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 RPAINQ86UA6 219 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 NDUFAF2Q8N183 169 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 TRIML2Q8N7C3 387 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 ULK4Q96C45 1275 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 MYCBPQ99417 103 aaPredicted RBP12.17□□□□□ -0.46
USP53-201ENST00000274030 BPIFA3Q9BQP9 254 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 OSBPL5Q9H0X9 879 aaPredicted RBP12.17□□□□□ -0.46
USP53-201ENST00000274030 ANP32DO95626 131 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 FGFR4P22455 802 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 MDM2Q00987 491 aaPredicted RBP12.17□□□□□ -0.46
USP53-201ENST00000274030 PDCD2Q16342 344 aaPredicted RBP12.17□□□□□ -0.46
USP53-201ENST00000274030 ANKMY2Q8IV38 441 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 CCDC124Q96CT7 223 aaKnown RBP12.17□□□□□ -0.46
USP53-201ENST00000274030 MS4A14Q96JA4 679 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 C2orf40Q9H1Z8 148 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 A0A0G2JLW4 131 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 E5RI56 91 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 GOLGA8RI6L899 631 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 DFFAO00273 331 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 CPB1P15086 417 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 ARHGDIAP52565 204 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 ROR1Q01973 937 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 IMPG1Q17R60 797 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 DUOXA2Q1HG44 320 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 RHOT1Q8IXI2 618 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 PPP1R36Q96LQ0 422 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 GCOM2Q9BZD3 368 aaPredicted RBP12.17□□□□□ -0.46
USP53-201ENST00000274030 CYP26B1Q9NR63 512 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 FBXO2Q9UK22 296 aaPredicted RBP12.17□□□□□ -0.46
USP53-201ENST00000274030 PID1Q7Z2X4 250 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 SCG3Q8WXD2 468 aaKnown RBP12.17□□□□□ -0.46
USP53-201ENST00000274030 RAPGEF5Q92565 580 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 ELP3Q9H9T3 547 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 THEGQ9P2T0 379 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 SEL1LQ9UBV2 794 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 L3MBTL1Q9Y468 752 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 SLC4A7Q9Y6M7 1214 aa12.17□□□□□ -0.46
USP53-201ENST00000274030 KRT7P08729 469 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 TXNP10599 105 aaKnown RBP12.16□□□□□ -0.46
USP53-201ENST00000274030 USP11P51784 963 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 PRAMEP78395 509 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 LBRQ14739 615 aaKnown RBP12.16□□□□□ -0.46
USP53-201ENST00000274030 EFHC2Q5JST6 749 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 IZUMO3Q5VZ72 239 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 GIPC2Q8TF65 315 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 EGFL8Q99944 293 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 SP110Q9HB58 689 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 POLRMTO00411 1230 aaKnown RBP12.16□□□□□ -0.46
USP53-201ENST00000274030 ORC4O43929 436 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 RGS7P49802 495 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 C1orf146Q5VVC0 180 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 ACAD11Q709F0 780 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 CPA5Q8WXQ8 436 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 N4BP2L2Q92802 583 aaPredicted RBP12.16□□□□□ -0.46
USP53-201ENST00000274030 TGS1Q96RS0 853 aaKnown RBP12.16□□□□□ -0.46
USP53-201ENST00000274030 FBXL5Q9UKA1 691 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 SCP2P22307 547 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 ARSEP51690 589 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 MORF4L2Q15014 288 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 TERF2Q15554 542 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 KLHL38Q2WGJ6 581 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 PDXDC1Q6P996 788 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 ASIC4Q96FT7 647 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 AGAP3Q96P47 875 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 JPH1Q9HDC5 661 aaPredicted RBP12.16□□□□□ -0.46
USP53-201ENST00000274030 GGT7Q9UJ14 662 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 SMARCA1P28370 1054 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 STAT5BP51692 787 aa12.16□□□□□ -0.46
USP53-201ENST00000274030 FMR1Q06787 632 aaKnown RBP eCLIP12.16□□□□□ -0.46
USP53-201ENST00000274030 TMEM62Q0P6H9 643 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms