RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 LRRC42Q9Y546 428 aa13.74□□□□□ -0.21
HERC6-202ENST00000273960 POTEB3A0JP26 581 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 C2orf71A6NGG8 1288 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 POTECB2RU33 542 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 RASA4BC9J798 803 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 RASA4O43374 803 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 PFDN1O60925 122 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 XRCC5P13010 732 aaKnown RBP13.73□□□□□ -0.21
HERC6-202ENST00000273960 KCNA1Q09470 495 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 GRIK5Q16478 980 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 OLFML2BQ68BL8 750 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 POTEBQ6S5H4 581 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 ZDHHC14Q8IZN3 488 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 PRELID2Q8N945 189 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 NDNQ99608 321 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 RIOK1Q9BRS2 568 aaKnown RBP13.73□□□□□ -0.21
HERC6-202ENST00000273960 ACP6Q9NPH0 428 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 CHCHD3Q9NX63 227 aaKnown RBP13.73□□□□□ -0.21
HERC6-202ENST00000273960 ROBO1Q9Y6N7 1651 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 A0A0G2JND7 137 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 CREB3O43889 395 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 SPATA31D3P0C874 917 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 CETPP11597 493 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 TNFAIP3P21580 790 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 NEK3P51956 506 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 POU5F1Q01860 360 aaKnown RBP13.73□□□□□ -0.21
HERC6-202ENST00000273960 ZBTB16Q05516 673 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 MCL1Q07820 350 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 SF3B3Q15393 1217 aaKnown RBP13.73□□□□□ -0.21
HERC6-202ENST00000273960 MTHFD1LQ6UB35 978 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 SPATA31D4Q6ZUB0 917 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 MTDHQ86UE4 582 aaKnown RBP13.73□□□□□ -0.21
HERC6-202ENST00000273960 LNX1Q8TBB1 728 aaPredicted RBP13.73□□□□□ -0.21
HERC6-202ENST00000273960 NSUN4Q96CB9 384 aaKnown RBP13.73□□□□□ -0.21
HERC6-202ENST00000273960 TTC1Q99614 292 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 IL17RBQ9NRM6 502 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 ALG6Q9Y672 507 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 WASF2Q9Y6W5 498 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 DISP2A7MBM2 1401 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 SPOPO43791 374 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 BAG3O95817 575 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 RASA1P20936 1047 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 TPP2P29144 1249 aaPredicted RBP13.73□□□□□ -0.21
HERC6-202ENST00000273960 RASSF2P50749 326 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 RCAN1P53805 252 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 TMEM62Q0P6H9 643 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 MTMR2Q13614 643 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 HS2ST1Q7LGA3 356 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 ZNF804AQ7Z570 1209 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 VPS52Q8N1B4 723 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 REXO1Q8N1G1 1221 aaKnown RBP13.73□□□□□ -0.21
HERC6-202ENST00000273960 KLHL23Q8NBE8 558 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 ASAP3Q8TDY4 903 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 CKAP2Q8WWK9 683 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 MCUR1Q96AQ8 359 aa13.73□□□□□ -0.21
HERC6-202ENST00000273960 DNAJC1Q96KC8 554 aaKnown RBP13.73□□□□□ -0.21
HERC6-202ENST00000273960 DCP1AQ9NPI6 582 aaPredicted RBP13.73□□□□□ -0.21
HERC6-202ENST00000273960 SEC63Q9UGP8 760 aaKnown RBP13.73□□□□□ -0.21
HERC6-202ENST00000273960 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.73□□□□□ -0.21
HERC6-202ENST00000273960 LIN7AO14910 233 aaPredicted RBP13.72□□□□□ -0.21
HERC6-202ENST00000273960 OPHN1O60890 802 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 KRT15P19012 456 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 STAT1P42224 750 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 PABPC4Q13310 644 aaKnown RBP eCLIP13.72□□□□□ -0.21
HERC6-202ENST00000273960 STMN2Q93045 179 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 HES6Q96HZ4 224 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 KLF6Q99612 283 aaPredicted RBP13.72□□□□□ -0.21
HERC6-202ENST00000273960 TXLNGYQ9BZA5 131 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 TAOK3Q9H2K8 898 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 C6orf50Q9HD87 102 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 BARHL2Q9NY43 387 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 PHTF1Q9UMS5 762 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 ATRNO75882 1429 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 GOLGA8RI6L899 631 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 PPP1R2P41236 205 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 FAM182AQ5T1J6 154 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 SLC30A10Q6XR72 485 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 EPM2AIP1Q7L775 607 aaPredicted RBP13.72□□□□□ -0.21
HERC6-202ENST00000273960 SLC25A41Q8N5S1 370 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 SCFD1Q8WVM8 642 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 NMD3Q96D46 503 aaKnown RBP13.72□□□□□ -0.21
HERC6-202ENST00000273960 AK8Q96MA6 479 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 RIC8AQ9NPQ8 531 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 LRRC4BQ9NT99 713 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 GALNT8Q9NY28 637 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 PPP1R1BQ9UD71 204 aaPredicted RBP13.72□□□□□ -0.21
HERC6-202ENST00000273960 COG5Q9UP83 839 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 PKD1L3Q7Z443 1732 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 DDX3YO15523 660 aaKnown RBP13.72□□□□□ -0.21
HERC6-202ENST00000273960 HNRNPRO43390 633 aaKnown RBP13.72□□□□□ -0.21
HERC6-202ENST00000273960 OAS1P00973 400 aaKnown RBP13.72□□□□□ -0.21
HERC6-202ENST00000273960 TRIM49P0CI25 452 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 TRIM49CP0CI26 452 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 NRG4Q8WWG1 115 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 JDP2Q8WYK2 163 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 ZNF512BQ96KM6 892 aaPredicted RBP13.72□□□□□ -0.21
HERC6-202ENST00000273960 HEMGNQ9BXL5 484 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 MAD2L2Q9UI95 211 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 GGA1Q9UJY5 639 aa13.72□□□□□ -0.21
HERC6-202ENST00000273960 CHMP2BQ9UQN3 213 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms