RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 NAA25Q14CX7 972 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 PCGF5Q86SE9 256 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 MICAL1Q8TDZ2 1067 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 PPP1R12CQ9BZL4 782 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 PCSK1NQ9UHG2 260 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 CYP26A1O43174 497 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 SART1O43290 800 aaKnown RBP16.44■□□□□ 0.22
TIMP3-201ENST00000266085 GPC4O75487 556 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 FAM83AQ86UY5 434 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 VCXQ9H320 206 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 DDX4Q9NQI0 724 aaKnown RBP16.44■□□□□ 0.22
TIMP3-201ENST00000266085 DONSONQ9NYP3 566 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 A0A1B0GUA9 196 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 NR1D1P20393 614 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 FXR1P51114 621 aaKnown RBP eCLIP16.44■□□□□ 0.22
TIMP3-201ENST00000266085 ZNF211Q13398 564 aaPredicted RBP16.44■□□□□ 0.22
TIMP3-201ENST00000266085 SNRNP35Q16560 246 aaKnown RBP16.44■□□□□ 0.22
TIMP3-201ENST00000266085 DACT2Q5SW24 774 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 RNF25Q96BH1 459 aaPredicted RBP16.44■□□□□ 0.22
TIMP3-201ENST00000266085 KCNQ5Q9NR82 932 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 IL17RBQ9NRM6 502 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 MAGEB2O15479 319 aa16.43■□□□□ 0.22
TIMP3-201ENST00000266085 DDNO94850 711 aaPredicted RBP16.43■□□□□ 0.22
TIMP3-201ENST00000266085 XPAP23025 273 aaPredicted RBP16.43■□□□□ 0.22
TIMP3-201ENST00000266085 KCNJ6P48051 423 aa16.43■□□□□ 0.22
TIMP3-201ENST00000266085 TSPY1Q01534 308 aa16.43■□□□□ 0.22
TIMP3-201ENST00000266085 NR1I3Q14994 352 aa16.43■□□□□ 0.22
TIMP3-201ENST00000266085 RYBPQ8N488 228 aaPredicted RBP16.43■□□□□ 0.22
TIMP3-201ENST00000266085 LRRC71Q8N4P6 559 aa16.43■□□□□ 0.22
TIMP3-201ENST00000266085 FAM163AQ96GL9 167 aaPredicted RBP16.43■□□□□ 0.22
TIMP3-201ENST00000266085 LRRC4BQ9NT99 713 aa16.43■□□□□ 0.22
TIMP3-201ENST00000266085 TLK1Q9UKI8 766 aa16.43■□□□□ 0.22
TIMP3-201ENST00000266085 NCK2O43639 380 aa16.43■□□□□ 0.22
TIMP3-201ENST00000266085 FMO5P49326 533 aa16.43■□□□□ 0.22
TIMP3-201ENST00000266085 GTF3C2Q8WUA4 911 aaPredicted RBP16.43■□□□□ 0.22
TIMP3-201ENST00000266085 DDX47Q9H0S4 455 aaKnown RBP16.43■□□□□ 0.22
TIMP3-201ENST00000266085 RIOX1Q9H6W3 641 aa16.43■□□□□ 0.22
TIMP3-201ENST00000266085 AGPAT5Q9NUQ2 364 aa16.43■□□□□ 0.22
TIMP3-201ENST00000266085 ITIH6Q6UXX5 1313 aa16.43■□□□□ 0.22
TIMP3-201ENST00000266085 SSU72P8A0A1W2PR75 194 aa16.43■□□□□ 0.22
TIMP3-201ENST00000266085 CA4P22748 312 aa16.43■□□□□ 0.22
TIMP3-201ENST00000266085 ASPHQ12797 758 aa16.43■□□□□ 0.22
TIMP3-201ENST00000266085 C6orf118Q5T5N4 469 aa16.43■□□□□ 0.22
TIMP3-201ENST00000266085 EFCAB13Q8IY85 973 aa16.43■□□□□ 0.22
TIMP3-201ENST00000266085 RAB3IPQ96QF0 476 aaPredicted RBP16.43■□□□□ 0.22
TIMP3-201ENST00000266085 KLC2Q9H0B6 622 aa16.43■□□□□ 0.22
TIMP3-201ENST00000266085 ZFYVE28Q9HCC9 887 aa16.43■□□□□ 0.22
TIMP3-201ENST00000266085 HDAC6Q9UBN7 1215 aa16.43■□□□□ 0.22
TIMP3-201ENST00000266085 ADGRB2O60241 1585 aa16.43■□□□□ 0.22
TIMP3-201ENST00000266085 NOL3O60936 208 aaKnown RBP16.42■□□□□ 0.22
TIMP3-201ENST00000266085 KRT7P08729 469 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 CTSHP09668 335 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 ADCY2Q08462 1091 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 RWDD4Q6NW29 188 aaKnown RBP16.42■□□□□ 0.22
TIMP3-201ENST00000266085 EXOC4Q96A65 974 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 POLR3CQ9BUI4 534 aaPredicted RBP16.42■□□□□ 0.22
TIMP3-201ENST00000266085 PPP1R9AQ9ULJ8 1098 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 STAP1Q9ULZ2 295 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 CAMTA1Q9Y6Y1 1673 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 WNT10BO00744 389 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 UCHL3P15374 230 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 SLC18A3Q16572 532 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 APOBEC3HQ6NTF7 200 aaKnown RBP16.42■□□□□ 0.22
TIMP3-201ENST00000266085 MORC4Q8TE76 937 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 SKA2Q8WVK7 121 aaPredicted RBP16.42■□□□□ 0.22
TIMP3-201ENST00000266085 APEX2Q9UBZ4 518 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 HMGB1P1B2RPK0 211 aaPredicted RBP16.42■□□□□ 0.22
TIMP3-201ENST00000266085 VCAM1P19320 739 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 TMEM62Q0P6H9 643 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 MAP3K21Q5TCX8 1036 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 ELOA2Q8IYF1 753 aaPredicted RBP16.42■□□□□ 0.22
TIMP3-201ENST00000266085 MCUQ8NE86 351 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 AKT1S1Q96B36 256 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 GPRASP2Q96D09 838 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.42■□□□□ 0.222e-6■■□□□ 12.7
TIMP3-201ENST00000266085 SLITRK6Q9H5Y7 841 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 ANKEF1Q9NU02 776 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 PACSIN2Q9UNF0 486 aaPredicted RBP16.42■□□□□ 0.22
TIMP3-201ENST00000266085 AGAP1Q9UPQ3 857 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 FNDC3AQ9Y2H6 1198 aaKnown RBP16.42■□□□□ 0.22
TIMP3-201ENST00000266085 HEY1Q9Y5J3 304 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 SLC4A1P02730 911 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 RARBP10826 455 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 SSTR3P32745 418 aaPredicted RBP16.42■□□□□ 0.22
TIMP3-201ENST00000266085 LIG3P49916 1009 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 IFT88Q13099 833 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 PKN1Q16512 942 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 KYAT1Q16773 422 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 RHOT1Q8IXI2 618 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 AGPAT1Q99943 283 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 STK33Q9BYT3 514 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 POLIQ9UNA4 740 aa16.42■□□□□ 0.22
TIMP3-201ENST00000266085 MYBL1P10243 752 aa16.41■□□□□ 0.22
TIMP3-201ENST00000266085 THOC5Q13769 683 aaKnown RBP16.41■□□□□ 0.22
TIMP3-201ENST00000266085 MAP7Q14244 749 aa16.41■□□□□ 0.22
TIMP3-201ENST00000266085 SYT2Q8N9I0 419 aaPredicted RBP16.41■□□□□ 0.22
TIMP3-201ENST00000266085 NUF2Q9BZD4 464 aa16.41■□□□□ 0.22
TIMP3-201ENST00000266085 IRX2Q9BZI1 471 aaPredicted RBP16.41■□□□□ 0.22
TIMP3-201ENST00000266085 ERAP1Q9NZ08 941 aa16.41■□□□□ 0.22
TIMP3-201ENST00000266085 IP6K2Q9UHH9 426 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms