RNA–Protein interactions for RNA: ENST00000265334.8

CDKL3-201, Transcript of cyclin dependent kinase like 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDKL3, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-201ENST00000265334 CBWD2Q8IUF1 395 aa12.89□□□□□ -0.35
CDKL3-201ENST00000265334 PARD3BQ8TEW8 1205 aa12.89□□□□□ -0.35
CDKL3-201ENST00000265334 MFSD14AQ96MC6 490 aa12.89□□□□□ -0.35
CDKL3-201ENST00000265334 KIFC3Q9BVG8 833 aa12.89□□□□□ -0.35
CDKL3-201ENST00000265334 CYP26B1Q9NR63 512 aa12.89□□□□□ -0.35
CDKL3-201ENST00000265334 TMEM59LQ9UK28 342 aa12.89□□□□□ -0.35
CDKL3-201ENST00000265334 PNMA3Q9UL41 463 aa12.89□□□□□ -0.35
CDKL3-201ENST00000265334 PACSIN2Q9UNF0 486 aaPredicted RBP12.89□□□□□ -0.35
CDKL3-201ENST00000265334 ADGRA3Q8IWK6 1321 aa12.89□□□□□ -0.35
CDKL3-201ENST00000265334 ATP4AP20648 1035 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 EDNRBP24530 442 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 TNFRSF8P28908 595 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 ALDH5A1P51649 535 aaPredicted RBP12.88□□□□□ -0.35
CDKL3-201ENST00000265334 SOX10P56693 466 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 RPS6KA1Q15418 735 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 SNRNP35Q16560 246 aaKnown RBP12.88□□□□□ -0.35
CDKL3-201ENST00000265334 ARHGAP44Q17R89 818 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 XKR3Q5GH77 459 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 NCAPG2Q86XI2 1143 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 TMC2Q8TDI7 906 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 AENQ8WTP8 325 aaKnown RBP12.88□□□□□ -0.35
CDKL3-201ENST00000265334 PAGR1Q9BTK6 254 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 ZNF408Q9H9D4 720 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 GBA2Q9HCG7 927 aaPredicted RBP12.88□□□□□ -0.35
CDKL3-201ENST00000265334 PDE11AQ9HCR9 933 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 TXNRD2Q9NNW7 524 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 ZCCHC17Q9NP64 241 aaKnown RBP12.88□□□□□ -0.35
CDKL3-201ENST00000265334 UBE2TQ9NPD8 197 aaPredicted RBP12.88□□□□□ -0.35
CDKL3-201ENST00000265334 LRRC37A2A6NM11 1700 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 GOLGA8IPA6NC78 632 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 GOLGA8JA6NMD2 632 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 CETPP11597 493 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 NOP2P46087 812 aaKnown RBP12.88□□□□□ -0.35
CDKL3-201ENST00000265334 MXI1P50539 228 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 CNTN2Q02246 1040 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 FSTL1Q12841 308 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 MIS18BP1Q6P0N0 1132 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 TAS1R3Q7RTX0 852 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 SHCBP1Q8NEM2 672 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 LMBR1Q8WVP7 490 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 MS4A4AQ96JQ5 239 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 PBKQ96KB5 322 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 ARHGAP28Q9P2N2 729 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 SUCLA2Q9P2R7 463 aaPredicted RBP12.88□□□□□ -0.35
CDKL3-201ENST00000265334 MAFBQ9Y5Q3 323 aaPredicted RBP12.88□□□□□ -0.35
CDKL3-201ENST00000265334 ZNFX1Q9P2E3 1918 aaKnown RBP12.88□□□□□ -0.35
CDKL3-201ENST00000265334 SYNGAP1Q96PV0 1343 aa12.88□□□□□ -0.35
CDKL3-201ENST00000265334 IGKV6D-21A0A0A0MT36 114 aa12.87□□□□□ -0.35
CDKL3-201ENST00000265334 AARSP49588 968 aaKnown RBP eCLIP12.87□□□□□ -0.35
CDKL3-201ENST00000265334 GTF2A2P52657 109 aa12.87□□□□□ -0.35
CDKL3-201ENST00000265334 TCEAL1Q15170 157 aa12.87□□□□□ -0.35
CDKL3-201ENST00000265334 BRDTQ58F21 947 aaPredicted RBP12.87□□□□□ -0.35
CDKL3-201ENST00000265334 NT5DC3Q86UY8 548 aa12.87□□□□□ -0.35
CDKL3-201ENST00000265334 PALB2Q86YC2 1186 aa12.87□□□□□ -0.35
CDKL3-201ENST00000265334 USP38Q8NB14 1042 aa12.87□□□□□ -0.35
CDKL3-201ENST00000265334 ZNF526Q8TF50 670 aaPredicted RBP12.87□□□□□ -0.35
CDKL3-201ENST00000265334 RFFLQ8WZ73 363 aa12.87□□□□□ -0.35
CDKL3-201ENST00000265334 CEP89Q96ST8 783 aa12.87□□□□□ -0.35
CDKL3-201ENST00000265334 AGPAT1Q99943 283 aa12.87□□□□□ -0.35
CDKL3-201ENST00000265334 GOLPH3Q9H4A6 298 aa12.87□□□□□ -0.35
CDKL3-201ENST00000265334 MROH8Q9H579 483 aa12.87□□□□□ -0.35
CDKL3-201ENST00000265334 ATP6V0A4Q9HBG4 840 aa12.87□□□□□ -0.35
CDKL3-201ENST00000265334 STIM2Q9P246 746 aa12.87□□□□□ -0.35
CDKL3-201ENST00000265334 SOWAHBA6NEL2 793 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 TNFAIP3P21580 790 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 GARTP22102 1010 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 GTF2H1P32780 548 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 MATR3P43243 847 aaKnown RBP eCLIP12.86□□□□□ -0.35
CDKL3-201ENST00000265334 HADHBP55084 474 aaKnown RBP12.86□□□□□ -0.35
CDKL3-201ENST00000265334 FAM71AQ8IYT1 594 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 C2orf69Q8N8R5 385 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 ACTRT1Q8TDG2 376 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 SEMA4DQ92854 862 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 SAAL1Q96ER3 474 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 KREMEN1Q96MU8 473 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 ISCUQ9H1K1 167 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 TMEM8AQ9HCN3 771 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 SEPT9Q9UHD8 586 aaPredicted RBP12.86□□□□□ -0.35
CDKL3-201ENST00000265334 HPCAL4Q9UM19 191 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 DNAJC25-GNG10A0A024R161 153 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 ANKRD62A6NC57 917 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 POLR3GO15318 223 aaPredicted RBP12.86□□□□□ -0.35
CDKL3-201ENST00000265334 ABCD1P33897 745 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 GPC3P51654 580 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 ERVK-9P63128 1117 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 CYP24A1Q07973 514 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 GPS2Q13227 327 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 Q3C1V9 767 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 KRT39Q6A163 491 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 SYCE1Q8N0S2 351 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 SLC35G2Q8TBE7 412 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 SCFD2Q8WU76 684 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 SHC3Q92529 594 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 TAF4BQ92750 862 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 KAT5Q92993 513 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 HES6Q96HZ4 224 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 SELENOOQ9BVL4 669 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 DHX33Q9H6R0 707 aaKnown RBP12.86□□□□□ -0.35
CDKL3-201ENST00000265334 TAS2R14Q9NYV8 317 aa12.86□□□□□ -0.35
CDKL3-201ENST00000265334 KCNG1Q9UIX4 513 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms