RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 ERO1AQ96HE7 468 aa17.16■□□□□ 0.34
VPS26A-201ENST00000263559 ZBTB45Q96K62 511 aaPredicted RBP17.16■□□□□ 0.34
VPS26A-201ENST00000263559 TARS2Q9BW92 718 aaKnown RBP17.16■□□□□ 0.34
VPS26A-201ENST00000263559 HAPLN2Q9GZV7 340 aa17.16■□□□□ 0.34
VPS26A-201ENST00000263559 ERAP1Q9NZ08 941 aa17.16■□□□□ 0.34
VPS26A-201ENST00000263559 BZW2Q9Y6E2 419 aaKnown RBP17.16■□□□□ 0.34
VPS26A-201ENST00000263559 ADGRA2Q96PE1 1338 aa17.16■□□□□ 0.34
VPS26A-201ENST00000263559 MACROD2A1Z1Q3 448 aa17.16■□□□□ 0.34
VPS26A-201ENST00000263559 MANSC4A6NHS7 340 aaPredicted RBP17.16■□□□□ 0.34
VPS26A-201ENST00000263559 F8VZ95 297 aa17.16■□□□□ 0.34
VPS26A-201ENST00000263559 PMM2O15305 246 aa17.16■□□□□ 0.34
VPS26A-201ENST00000263559 LGALS2P05162 132 aa17.16■□□□□ 0.34
VPS26A-201ENST00000263559 LAMTOR4Q0VGL1 99 aa17.16■□□□□ 0.34
VPS26A-201ENST00000263559 TMC2Q8TDI7 906 aa17.16■□□□□ 0.34
VPS26A-201ENST00000263559 AFG1LQ8WV93 481 aa17.16■□□□□ 0.34
VPS26A-201ENST00000263559 NAPGQ99747 312 aaPredicted RBP17.16■□□□□ 0.34
VPS26A-201ENST00000263559 GPR88Q9GZN0 384 aa17.16■□□□□ 0.34
VPS26A-201ENST00000263559 GAS2O43903 313 aaKnown RBP17.15■□□□□ 0.34
VPS26A-201ENST00000263559 GFPT2O94808 682 aa17.15■□□□□ 0.34
VPS26A-201ENST00000263559 SOX5P35711 763 aa17.15■□□□□ 0.34
VPS26A-201ENST00000263559 MAP2K1Q02750 393 aaPredicted RBP17.15■□□□□ 0.34
VPS26A-201ENST00000263559 TAF1CQ15572 869 aaPredicted RBP17.15■□□□□ 0.34
VPS26A-201ENST00000263559 RGMBQ6NW40 437 aa17.15■□□□□ 0.34
VPS26A-201ENST00000263559 PPTC7Q8NI37 304 aa17.15■□□□□ 0.34
VPS26A-201ENST00000263559 PSPC1Q8WXF1 523 aaKnown RBP17.15■□□□□ 0.34
VPS26A-201ENST00000263559 ZBTB10Q96DT7 871 aa17.15■□□□□ 0.34
VPS26A-201ENST00000263559 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.15■□□□□ 0.34
VPS26A-201ENST00000263559 V9GYY5 206 aaPredicted RBP17.15■□□□□ 0.34
VPS26A-201ENST00000263559 ZNF233A6NK53 670 aa17.15■□□□□ 0.34
VPS26A-201ENST00000263559 PJA2O43164 708 aa17.15■□□□□ 0.34
VPS26A-201ENST00000263559 EXTL3O43909 919 aa17.15■□□□□ 0.34
VPS26A-201ENST00000263559 SRGAP2CP0DJJ0 459 aa17.15■□□□□ 0.34
VPS26A-201ENST00000263559 EMID1Q96A84 441 aaPredicted RBP17.15■□□□□ 0.34
VPS26A-201ENST00000263559 CARD6Q9BX69 1037 aa17.15■□□□□ 0.34
VPS26A-201ENST00000263559 ABHD16BQ9H3Z7 469 aa17.15■□□□□ 0.34
VPS26A-201ENST00000263559 TOPORSQ9NS56 1045 aaPredicted RBP17.15■□□□□ 0.34
VPS26A-201ENST00000263559 AGO2Q9UKV8 859 aaKnown RBP17.15■□□□□ 0.34
VPS26A-201ENST00000263559 MYH10P35580 1976 aa17.15■□□□□ 0.34
VPS26A-201ENST00000263559 FERP16591 822 aa17.14■□□□□ 0.34
VPS26A-201ENST00000263559 SMPD1P17405 629 aa17.14■□□□□ 0.34
VPS26A-201ENST00000263559 ACVR2BQ13705 512 aa17.14■□□□□ 0.34
VPS26A-201ENST00000263559 MXD4Q14582 209 aaPredicted RBP17.14■□□□□ 0.34
VPS26A-201ENST00000263559 ARHGAP44Q17R89 818 aa17.14■□□□□ 0.34
VPS26A-201ENST00000263559 KRT39Q6A163 491 aa17.14■□□□□ 0.34
VPS26A-201ENST00000263559 ARHGEF19Q8IW93 802 aa17.14■□□□□ 0.34
VPS26A-201ENST00000263559 SECISBP2LQ93073 1101 aaKnown RBP17.14■□□□□ 0.34
VPS26A-201ENST00000263559 UBE2TQ9NPD8 197 aaPredicted RBP17.14■□□□□ 0.34
VPS26A-201ENST00000263559 SUCLA2Q9P2R7 463 aaPredicted RBP17.14■□□□□ 0.34
VPS26A-201ENST00000263559 EVI5O60447 810 aa17.14■□□□□ 0.33
VPS26A-201ENST00000263559 DLATP10515 647 aaKnown RBP17.14■□□□□ 0.33
VPS26A-201ENST00000263559 NCBP1Q09161 790 aaKnown RBP17.14■□□□□ 0.33
VPS26A-201ENST00000263559 SLFN12LQ6IEE8 588 aa17.14■□□□□ 0.33
VPS26A-201ENST00000263559 RNF149Q8NC42 400 aa17.14■□□□□ 0.33
VPS26A-201ENST00000263559 KIAA1586Q9HCI6 787 aa17.14■□□□□ 0.33
VPS26A-201ENST00000263559 TMEM8AQ9HCN3 771 aa17.14■□□□□ 0.33
VPS26A-201ENST00000263559 ZHX1Q9UKY1 873 aaPredicted RBP17.14■□□□□ 0.33
VPS26A-201ENST00000263559 DAAM1Q9Y4D1 1078 aa17.14■□□□□ 0.33
VPS26A-201ENST00000263559 ZNF236Q9UL36 1845 aa17.14■□□□□ 0.33
VPS26A-201ENST00000263559 TTLL13PA6NNM8 815 aa17.14■□□□□ 0.33
VPS26A-201ENST00000263559 INSRRP14616 1297 aa17.14■□□□□ 0.33
VPS26A-201ENST00000263559 ACOT2P49753 483 aa17.14■□□□□ 0.33
VPS26A-201ENST00000263559 NLRP11P59045 1033 aaKnown RBP17.14■□□□□ 0.33
VPS26A-201ENST00000263559 DUSP28Q4G0W2 176 aa17.14■□□□□ 0.33
VPS26A-201ENST00000263559 MORN1Q5T089 497 aa17.14■□□□□ 0.33
VPS26A-201ENST00000263559 EFCAB12Q6NXP0 572 aa17.14■□□□□ 0.33
VPS26A-201ENST00000263559 RHPN2Q8IUC4 686 aa17.14■□□□□ 0.33
VPS26A-201ENST00000263559 SEMA4DQ92854 862 aa17.14■□□□□ 0.33
VPS26A-201ENST00000263559 JPH2Q9BR39 696 aaPredicted RBP17.14■□□□□ 0.33
VPS26A-201ENST00000263559 ENC1O14682 589 aa17.13■□□□□ 0.33
VPS26A-201ENST00000263559 GJB1P08034 283 aa17.13■□□□□ 0.33
VPS26A-201ENST00000263559 ZNF286BP0CG31 522 aa17.13■□□□□ 0.33
VPS26A-201ENST00000263559 RFX1P22670 979 aa17.13■□□□□ 0.33
VPS26A-201ENST00000263559 EFNA5P52803 228 aa17.13■□□□□ 0.33
VPS26A-201ENST00000263559 IGBP1P78318 339 aa17.13■□□□□ 0.33
VPS26A-201ENST00000263559 CDCA2Q69YH5 1023 aaPredicted RBP17.13■□□□□ 0.33
VPS26A-201ENST00000263559 CRELD2Q6UXH1 353 aaPredicted RBP17.13■□□□□ 0.33
VPS26A-201ENST00000263559 USP37Q86T82 979 aa17.13■□□□□ 0.33
VPS26A-201ENST00000263559 METTL13Q8N6R0 699 aa17.13■□□□□ 0.33
VPS26A-201ENST00000263559 C16orf70Q9BSU1 422 aa17.13■□□□□ 0.33
VPS26A-201ENST00000263559 CCDC113Q9H0I3 377 aa17.13■□□□□ 0.33
VPS26A-201ENST00000263559 ZCCHC17Q9NP64 241 aaKnown RBP17.13■□□□□ 0.33
VPS26A-201ENST00000263559 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.13■□□□□ 0.338e-9■■■■■ 96.2
VPS26A-201ENST00000263559 SLC5A4Q9NY91 659 aa17.13■□□□□ 0.33
VPS26A-201ENST00000263559 ANKFY1Q9P2R3 1169 aa17.13■□□□□ 0.33
VPS26A-201ENST00000263559 SALL4Q9UJQ4 1053 aa17.13■□□□□ 0.33
VPS26A-201ENST00000263559 COQ4Q9Y3A0 265 aa17.13■□□□□ 0.33
VPS26A-201ENST00000263559 FOXN3O00409 490 aaPredicted RBP17.13■□□□□ 0.33
VPS26A-201ENST00000263559 KIAA0391O15091 583 aaKnown RBP17.13■□□□□ 0.33
VPS26A-201ENST00000263559 MSCO60682 206 aa17.13■□□□□ 0.33
VPS26A-201ENST00000263559 CLCN3P51790 818 aa17.13■□□□□ 0.33
VPS26A-201ENST00000263559 RBM10P98175 930 aaKnown RBP17.13■□□□□ 0.33
VPS26A-201ENST00000263559 IFNL1Q8IU54 200 aa17.13■□□□□ 0.33
VPS26A-201ENST00000263559 ZNF710Q8N1W2 664 aa17.13■□□□□ 0.33
VPS26A-201ENST00000263559 MNS1Q8NEH6 495 aa17.13■□□□□ 0.33
VPS26A-201ENST00000263559 ZNF668Q96K58 619 aaPredicted RBP17.13■□□□□ 0.33
VPS26A-201ENST00000263559 MSTO1Q9BUK6 570 aa17.13■□□□□ 0.33
VPS26A-201ENST00000263559 CDC23Q9UJX2 597 aa17.13■□□□□ 0.33
VPS26A-201ENST00000263559 A0A0B4J269 797 aa17.12■□□□□ 0.33
VPS26A-201ENST00000263559 PPFIA4O75335 1185 aa17.12■□□□□ 0.33
VPS26A-201ENST00000263559 C22orf31O95567 290 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms