RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 GH2P01242 217 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 SCARF1Q14162 830 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 HIC1Q14526 733 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 ZNF699Q32M78 642 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 METTL23Q86XA0 190 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 PNKPQ96T60 521 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 UNC45AQ9H3U1 944 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 HPS4Q9NQG7 708 aa12.8□□□□□ -0.36
SMG6-201ENST00000263073 TARSL2A2RTX5 802 aaKnown RBP12.79□□□□□ -0.36
SMG6-201ENST00000263073 DENND3A2RUS2 1198 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 SNX2O60749 519 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 NMT1P30419 496 aaKnown RBP12.79□□□□□ -0.36
SMG6-201ENST00000263073 CNGA3Q16281 694 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 SHCBP1LQ9BZQ2 653 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 MROH7-TTC4A0A0A0MT08 1334 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 IGF2BP3O00425 579 aaKnown RBP eCLIP12.79□□□□□ -0.36
SMG6-201ENST00000263073 XPO1O14980 1071 aaKnown RBP12.79□□□□□ -0.36
SMG6-201ENST00000263073 ROR1Q01973 937 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 SF3B3Q15393 1217 aaKnown RBP12.79□□□□□ -0.36
SMG6-201ENST00000263073 RBBP7Q16576 425 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 RINLQ6ZS11 566 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 TEX2Q8IWB9 1127 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 XXYLT1Q8NBI6 393 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 THTPAQ9BU02 230 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 RAVER2Q9HCJ3 691 aaKnown RBP12.79□□□□□ -0.36
SMG6-201ENST00000263073 V9GYQ6 96 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 COBLL1Q53SF7 1204 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 ZNF667Q5HYK9 610 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 BTNL9Q6UXG8 535 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 USP49Q70CQ1 688 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 TC2NQ8N9U0 490 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 SNX19Q92543 992 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 CEP95Q96GE4 821 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 COG4Q9H9E3 785 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 SLC9A2Q9UBY0 812 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 ARL2BPQ9Y2Y0 163 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 WDR17Q8IZU2 1322 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 KPNA7A9QM74 516 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 STXBP3O00186 592 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 ZNF341Q9BYN7 854 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 SCP2P22307 547 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 ADORA2BP29275 332 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 RNF139Q8WU17 664 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 CNKSR1Q969H4 720 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 ACAP3Q96P50 834 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 TAF6LQ9Y6J9 622 aa12.79□□□□□ -0.36
SMG6-201ENST00000263073 ENO3P13929 434 aaPredicted RBP12.78□□□□□ -0.36
SMG6-201ENST00000263073 IRAK1P51617 712 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 MTMR1Q13613 665 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 TTC25Q96NG3 672 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 SH3GLB2Q9NR46 395 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 DLGAP2Q9P1A6 1054 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 TRIM33Q9UPN9 1127 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 TYK2P29597 1187 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 SERPINB4P48594 390 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 PRELPP51888 382 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 LBRQ14739 615 aaKnown RBP12.78□□□□□ -0.36
SMG6-201ENST00000263073 IMPG1Q17R60 797 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 LEMD3Q9Y2U8 911 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 SKAP2O75563 359 aaPredicted RBP12.78□□□□□ -0.36
SMG6-201ENST00000263073 PYGBP11216 843 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 VCAM1P19320 739 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 TARSP26639 723 aaKnown RBP12.78□□□□□ -0.36
SMG6-201ENST00000263073 SESN2P58004 480 aaPredicted RBP12.78□□□□□ -0.36
SMG6-201ENST00000263073 KIAA1755Q5JYT7 1200 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 DSTYKQ6XUX3 929 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 AGAP3Q96P47 875 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 PJA2O43164 708 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 TSPY1Q01534 308 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 CYGBQ8WWM9 190 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 OLFM3Q96PB7 478 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 ZBTB18Q99592 522 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 ZSCAN9O15535 394 aaPredicted RBP12.78□□□□□ -0.36
SMG6-201ENST00000263073 ESRRBO95718 433 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 IL31Q6EBC2 164 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 LRRC31Q6UY01 552 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 XPO6Q96QU8 1125 aaKnown RBP12.78□□□□□ -0.36
SMG6-201ENST00000263073 DHX35Q9H5Z1 703 aaKnown RBP12.78□□□□□ -0.36
SMG6-201ENST00000263073 MID2Q9UJV3 735 aa12.78□□□□□ -0.36
SMG6-201ENST00000263073 USP15Q9Y4E8 981 aaPredicted RBP12.78□□□□□ -0.36
SMG6-201ENST00000263073 A0A1B0GTH6 734 aa12.77□□□□□ -0.36
SMG6-201ENST00000263073 KIF1CO43896 1103 aaKnown RBP12.77□□□□□ -0.36
SMG6-201ENST00000263073 KCNJ1P48048 391 aa12.77□□□□□ -0.36
SMG6-201ENST00000263073 TRPM8Q7Z2W7 1104 aa12.77□□□□□ -0.36
SMG6-201ENST00000263073 PROM2Q8N271 834 aa12.77□□□□□ -0.36
SMG6-201ENST00000263073 OTULINQ96BN8 352 aa12.77□□□□□ -0.36
SMG6-201ENST00000263073 ASNSD1Q9NWL6 643 aa12.77□□□□□ -0.36
SMG6-201ENST00000263073 SLAIN2Q9P270 581 aa12.77□□□□□ -0.36
SMG6-201ENST00000263073 UBA6A0AVT1 1052 aaPredicted RBP12.77□□□□□ -0.36
SMG6-201ENST00000263073 ZBTB5O15062 677 aa12.77□□□□□ -0.36
SMG6-201ENST00000263073 PLA2G4AP47712 749 aa12.77□□□□□ -0.36
SMG6-201ENST00000263073 BLVRAP53004 296 aa12.77□□□□□ -0.36
SMG6-201ENST00000263073 RARS2Q5T160 578 aaKnown RBP12.77□□□□□ -0.36
SMG6-201ENST00000263073 DCAF15Q66K64 600 aa12.77□□□□□ -0.36
SMG6-201ENST00000263073 SLC30A9Q6PML9 568 aa12.77□□□□□ -0.36
SMG6-201ENST00000263073 ABI1Q8IZP0 508 aa12.77□□□□□ -0.36
SMG6-201ENST00000263073 TSSK1BQ9BXA7 367 aa12.77□□□□□ -0.36
SMG6-201ENST00000263073 ERCC6L2Q5T890 1561 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 SERPINB2P05120 415 aa12.77□□□□□ -0.37
SMG6-201ENST00000263073 ATP6V1B1P15313 513 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms