RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 MS4A14Q96JA4 679 aa14□□□□□ -0.17
SPTLC1-201ENST00000262554 MFSD14AQ96MC6 490 aa14□□□□□ -0.17
SPTLC1-201ENST00000262554 AGPAT1Q99943 283 aa14□□□□□ -0.17
SPTLC1-201ENST00000262554 ACBD3Q9H3P7 528 aa14□□□□□ -0.17
SPTLC1-201ENST00000262554 TMEM8AQ9HCN3 771 aa14□□□□□ -0.17
SPTLC1-201ENST00000262554 ST7Q9NRC1 585 aa14□□□□□ -0.17
SPTLC1-201ENST00000262554 SEPT11Q9NVA2 429 aaKnown RBP14□□□□□ -0.17
SPTLC1-201ENST00000262554 SMARCAL1Q9NZC9 954 aa14□□□□□ -0.17
SPTLC1-201ENST00000262554 EHD2Q9NZN4 543 aa14□□□□□ -0.17
SPTLC1-201ENST00000262554 ARHGAP28Q9P2N2 729 aa14□□□□□ -0.17
SPTLC1-201ENST00000262554 PACSIN2Q9UNF0 486 aaPredicted RBP14□□□□□ -0.17
SPTLC1-201ENST00000262554 NCANO14594 1321 aa14□□□□□ -0.17
SPTLC1-201ENST00000262554 ADGRA3Q8IWK6 1321 aa14□□□□□ -0.17
SPTLC1-201ENST00000262554 CXCL11O14625 94 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 PEX10O60683 326 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 KIF4AO95239 1232 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 GTF2H1P32780 548 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 MFAP3P55082 362 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 ENPEPQ07075 957 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 GLE1Q53GS7 698 aaKnown RBP13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 CHADLQ6NUI6 762 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 GPD1LQ8N335 351 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 CTNNBL1Q8WYA6 563 aaPredicted RBP13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 PBKQ96KB5 322 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 MPHOSPH6Q99547 160 aaKnown RBP13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 PAGR1Q9BTK6 254 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 LRRC1Q9BTT6 524 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 SELENOOQ9BVL4 669 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 SUGCTQ9HAC7 445 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 RBM12Q9NTZ6 932 aaKnown RBP13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 LRRIQ3A6PVS8 624 aaPredicted RBP13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 TMCO5BA8MYB1 307 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 ATP4AP20648 1035 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 UBA1P22314 1058 aaKnown RBP13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 EDNRBP24530 442 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 OAS2P29728 719 aaKnown RBP13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 CYP24A1Q07973 514 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 STRN3Q13033 797 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 TTLL12Q14166 644 aaPredicted RBP13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 NEDD9Q14511 834 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 C8orf74Q6P047 294 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 CCNI2Q6ZMN8 369 aaPredicted RBP13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 PEX26Q7Z412 305 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 SLFN11Q7Z7L1 901 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 RFFLQ8WZ73 363 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 NIFKQ9BYG3 293 aaKnown RBP13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 ASCC2Q9H1I8 757 aaPredicted RBP13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 KIAA1586Q9HCI6 787 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 COQ4Q9Y3A0 265 aa13.99□□□□□ -0.17
SPTLC1-201ENST00000262554 LRRC37A2A6NM11 1700 aa13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 SIP14410 1827 aa13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 IGKV6D-21A0A0A0MT36 114 aa13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 SOWAHBA6NEL2 793 aa13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 SPDYE5A6NIY4 337 aa13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 KCNK3O14649 394 aa13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 ZMYND10O75800 440 aa13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 SLC25A27O95847 323 aa13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 TGFB3P10600 412 aa13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 COPB2P35606 906 aa13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 USP8P40818 1118 aa13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 TNNT3P45378 269 aaPredicted RBP13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 LIG4P49917 911 aa13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 FAM160B1Q5W0V3 765 aa13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 PAXIP1Q6ZW49 1069 aaPredicted RBP13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 DAAM2Q86T65 1068 aa13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 PPM1KQ8N3J5 372 aa13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 FBXL13Q8NEE6 735 aa13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 ZNF526Q8TF50 670 aaPredicted RBP13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 SLC7A3Q8WY07 619 aa13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 CLMNQ96JQ2 1002 aa13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 PORCNQ9H237 461 aa13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 DHX33Q9H6R0 707 aaKnown RBP13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 NRBP2Q9NSY0 501 aa13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 SUCLA2Q9P2R7 463 aaPredicted RBP13.98□□□□□ -0.17
SPTLC1-201ENST00000262554 A0A0U1RQG5 324 aaPredicted RBP13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 ANKRD62A6NC57 917 aa13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 KIAA0391O15091 583 aaKnown RBP13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 FARP2O94887 1054 aaPredicted RBP13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 ABCB4P21439 1286 aa13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 RFC5P40937 340 aa13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 NAMPTP43490 491 aa13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 GPC3P51654 580 aa13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 TAS1R3Q7RTX0 852 aa13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 DEPTORQ8TB45 409 aa13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 SLC35G2Q8TBE7 412 aa13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 SEMA4DQ92854 862 aa13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 TMEM143Q96AN5 459 aa13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 CDCA5Q96FF9 252 aa13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 NT5C1BQ96P26 610 aa13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 POP1Q99575 1024 aaKnown RBP13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 FAM213AQ9BRX8 229 aa13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 VIPAS39Q9H9C1 493 aa13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 STIM2Q9P246 746 aa13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 AGTPBP1Q9UPW5 1226 aa13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 GSTTP1A0A1W2PQM5 241 aa13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 ZNF233A6NK53 670 aa13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 EXTL3O43909 919 aa13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 DLATP10515 647 aaKnown RBP13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 FAM193AP78312 1265 aa13.97□□□□□ -0.17
SPTLC1-201ENST00000262554 PPIL2Q13356 520 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms