RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 FOXN3O00409 490 aaPredicted RBP24.36■■□□□ 1.49
MCF2L-201ENST00000261963 LRRN2O75325 713 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 PLS3P13797 630 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 PPP3CAQ08209 521 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 MTMR1Q13613 665 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 KIF22Q14807 665 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 UGCGQ16739 394 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 SPRED3Q2MJR0 410 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 LACTB2Q53H82 288 aaPredicted RBP24.36■■□□□ 1.49
MCF2L-201ENST00000261963 C1orf220Q5T0J3 134 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 TAX1BP1Q86VP1 789 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 ZSWIM2Q8NEG5 633 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 SEC16BQ96JE7 1060 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 TAAR1Q96RJ0 339 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 TRIM6Q9C030 488 aaPredicted RBP24.36■■□□□ 1.49
MCF2L-201ENST00000261963 DAAM1Q9Y4D1 1078 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 EMSYQ7Z589 1322 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 BHMG1C9JSJ3 638 aaPredicted RBP24.36■■□□□ 1.49
MCF2L-201ENST00000261963 SCTRP47872 440 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 PPATQ06203 517 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 XRCC4Q13426 336 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 ALCAMQ13740 583 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 INTS8Q75QN2 995 aaKnown RBP24.36■■□□□ 1.49
MCF2L-201ENST00000261963 C12orf56Q8IXR9 622 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 LPAR1Q92633 364 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 ARHGEF26Q96DR7 871 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 TEPSINQ96N21 525 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 ACCSQ96QU6 501 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 KIAA1683Q9H0B3 1180 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 VPS33BQ9H267 617 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 MYOZ2Q9NPC6 264 aa24.36■■□□□ 1.49
MCF2L-201ENST00000261963 KRT13P13646 458 aa24.35■■□□□ 1.49
MCF2L-201ENST00000261963 EIF2AK2P19525 551 aaKnown RBP24.35■■□□□ 1.49
MCF2L-201ENST00000261963 ABCB4P21439 1286 aa24.35■■□□□ 1.49
MCF2L-201ENST00000261963 ECHS1P30084 290 aa24.35■■□□□ 1.49
MCF2L-201ENST00000261963 CACNA2D3Q8IZS8 1091 aa24.35■■□□□ 1.49
MCF2L-201ENST00000261963 PLEKHO2Q8TD55 490 aa24.35■■□□□ 1.49
MCF2L-201ENST00000261963 ASTN2O75129 1339 aaPredicted RBP24.35■■□□□ 1.49
MCF2L-201ENST00000261963 ITGA4P13612 1032 aa24.35■■□□□ 1.49
MCF2L-201ENST00000261963 CALRP27797 417 aaKnown RBP24.35■■□□□ 1.49
MCF2L-201ENST00000261963 RPS6P62753 249 aaKnown RBP24.35■■□□□ 1.49
MCF2L-201ENST00000261963 QPCTQ16769 361 aa24.35■■□□□ 1.49
MCF2L-201ENST00000261963 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.35■■□□□ 1.49
MCF2L-201ENST00000261963 P3H4Q92791 437 aa24.35■■□□□ 1.49
MCF2L-201ENST00000261963 ISCUQ9H1K1 167 aa24.35■■□□□ 1.49
MCF2L-201ENST00000261963 SLC12A6Q9UHW9 1150 aa24.35■■□□□ 1.49
MCF2L-201ENST00000261963 FAM170AA1A519 330 aa24.34■■□□□ 1.49
MCF2L-201ENST00000261963 SART1O43290 800 aaKnown RBP24.34■■□□□ 1.49
MCF2L-201ENST00000261963 RFX1P22670 979 aa24.34■■□□□ 1.49
MCF2L-201ENST00000261963 YWHABP31946 246 aaKnown RBP24.34■■□□□ 1.49
MCF2L-201ENST00000261963 VAMP7P51809 220 aa24.34■■□□□ 1.49
MCF2L-201ENST00000261963 ARMC9Q7Z3E5 817 aa24.34■■□□□ 1.49
MCF2L-201ENST00000261963 ARHGEF19Q8IW93 802 aa24.34■■□□□ 1.49
MCF2L-201ENST00000261963 DDX47Q9H0S4 455 aaKnown RBP24.34■■□□□ 1.49
MCF2L-201ENST00000261963 TAF1DQ9H5J8 278 aaPredicted RBP24.34■■□□□ 1.49
MCF2L-201ENST00000261963 PPP1R9AQ9ULJ8 1098 aa24.34■■□□□ 1.49
MCF2L-201ENST00000261963 BACH1O14867 736 aa24.34■■□□□ 1.49
MCF2L-201ENST00000261963 ECM2O94769 699 aaPredicted RBP24.34■■□□□ 1.49
MCF2L-201ENST00000261963 TNFAIP3P21580 790 aa24.34■■□□□ 1.49
MCF2L-201ENST00000261963 GBP2P32456 591 aaPredicted RBP24.34■■□□□ 1.49
MCF2L-201ENST00000261963 EPC2Q52LR7 807 aa24.34■■□□□ 1.49
MCF2L-201ENST00000261963 CTNNBL1Q8WYA6 563 aaPredicted RBP24.34■■□□□ 1.49
MCF2L-201ENST00000261963 GPRC5CQ9NQ84 441 aa24.34■■□□□ 1.49
MCF2L-201ENST00000261963 TBC1D22BQ9NU19 505 aa24.34■■□□□ 1.49
MCF2L-201ENST00000261963 HSPBP1Q9NZL4 362 aa24.34■■□□□ 1.49
MCF2L-201ENST00000261963 ATP9AO75110 1047 aa24.33■■□□□ 1.49
MCF2L-201ENST00000261963 RTN2O75298 545 aa24.33■■□□□ 1.49
MCF2L-201ENST00000261963 EGFRP00533 1210 aa24.33■■□□□ 1.49
MCF2L-201ENST00000261963 GTF2BQ00403 316 aa24.33■■□□□ 1.49
MCF2L-201ENST00000261963 PGM5Q15124 567 aa24.33■■□□□ 1.49
MCF2L-201ENST00000261963 HAUS6Q7Z4H7 955 aa24.33■■□□□ 1.49
MCF2L-201ENST00000261963 CEP120Q8N960 986 aa24.33■■□□□ 1.49
MCF2L-201ENST00000261963 PROCA1Q8NCQ7 364 aaPredicted RBP24.33■■□□□ 1.49
MCF2L-201ENST00000261963 SLC20A1Q8WUM9 679 aa24.33■■□□□ 1.49
MCF2L-201ENST00000261963 THAP2Q9H0W7 228 aa24.33■■□□□ 1.49
MCF2L-201ENST00000261963 UBE2TQ9NPD8 197 aaPredicted RBP24.33■■□□□ 1.49
MCF2L-201ENST00000261963 AMFRQ9UKV5 643 aa24.33■■□□□ 1.49
MCF2L-201ENST00000261963 C5orf60A6NFR6 353 aa24.33■■□□□ 1.48
MCF2L-201ENST00000261963 KRIT1O00522 736 aa24.33■■□□□ 1.48
MCF2L-201ENST00000261963 DDX3YO15523 660 aaKnown RBP24.33■■□□□ 1.48
MCF2L-201ENST00000261963 MGRN1O60291 552 aa24.33■■□□□ 1.48
MCF2L-201ENST00000261963 GCLMP48507 274 aa24.33■■□□□ 1.48
MCF2L-201ENST00000261963 BIRC3Q13489 604 aa24.33■■□□□ 1.48
MCF2L-201ENST00000261963 ST6GALNAC4Q9H4F1 302 aa24.33■■□□□ 1.48
MCF2L-201ENST00000261963 KIF3CO14782 793 aa24.32■■□□□ 1.48
MCF2L-201ENST00000261963 CCNE2O96020 404 aa24.32■■□□□ 1.48
MCF2L-201ENST00000261963 EIF1ADQ8N9N8 165 aaKnown RBP24.32■■□□□ 1.48
MCF2L-201ENST00000261963 XXYLT1Q8NBI6 393 aa24.32■■□□□ 1.48
MCF2L-201ENST00000261963 AGPAT1Q99943 283 aa24.32■■□□□ 1.48
MCF2L-201ENST00000261963 COG5Q9UP83 839 aa24.32■■□□□ 1.48
MCF2L-201ENST00000261963 CCDC188H7C350 402 aa24.32■■□□□ 1.48
MCF2L-201ENST00000261963 DNAJC8O75937 253 aaPredicted RBP24.32■■□□□ 1.48
MCF2L-201ENST00000261963 HSD17B3P37058 310 aa24.32■■□□□ 1.48
MCF2L-201ENST00000261963 NAA25Q14CX7 972 aa24.32■■□□□ 1.48
MCF2L-201ENST00000261963 DCAF12L1Q5VU92 463 aa24.32■■□□□ 1.48
MCF2L-201ENST00000261963 RUFY4Q6ZNE9 571 aa24.32■■□□□ 1.48
MCF2L-201ENST00000261963 C4orf19Q8IY42 314 aa24.32■■□□□ 1.48
MCF2L-201ENST00000261963 SEPT11Q9NVA2 429 aaKnown RBP24.32■■□□□ 1.48
MCF2L-201ENST00000261963 P4HA2O15460 535 aa24.31■■□□□ 1.48
MCF2L-201ENST00000261963 TMOD1P28289 359 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms