RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 CNOT7Q9UIV1 285 aaKnown RBP9.26□□□□□ -0.93
PTCD3-201ENST00000254630 EMSYQ7Z589 1322 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 TNPO2O14787 897 aaKnown RBP9.26□□□□□ -0.93
PTCD3-201ENST00000254630 TMCC1O94876 653 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 ZBTB41Q5SVQ8 909 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 TADA2BQ86TJ2 420 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 FMR1NBQ8N0W7 255 aaPredicted RBP9.26□□□□□ -0.93
PTCD3-201ENST00000254630 SRBD1Q8N5C6 995 aaKnown RBP9.26□□□□□ -0.93
PTCD3-201ENST00000254630 NCLNQ969V3 563 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 ZNF212Q9UDV6 495 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 TSR3Q9UJK0 312 aaKnown RBP9.26□□□□□ -0.93
PTCD3-201ENST00000254630 DAGLAQ9Y4D2 1042 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 PCDHA10Q9Y5I2 948 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 KIAA1210Q9ULL0 1709 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 USP32Q8NFA0 1604 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 SLC26A4O43511 780 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 MOCS2O96007 188 aaPredicted RBP9.26□□□□□ -0.93
PTCD3-201ENST00000254630 ZFXP17010 805 aaPredicted RBP9.26□□□□□ -0.93
PTCD3-201ENST00000254630 PMS2P54278 862 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 VEPH1Q14D04 833 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 STYK1Q6J9G0 422 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 ACAD11Q709F0 780 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 GTF3C2Q8WUA4 911 aaPredicted RBP9.26□□□□□ -0.93
PTCD3-201ENST00000254630 TTC17Q96AE7 1141 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 SARS2Q9NP81 518 aaKnown RBP9.26□□□□□ -0.93
PTCD3-201ENST00000254630 PCSK1NQ9UHG2 260 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 A0A087WUV0 522 aaPredicted RBP9.26□□□□□ -0.93
PTCD3-201ENST00000254630 PI4K2BG5E9Z4 385 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 ZNF189O75820 626 aaPredicted RBP9.26□□□□□ -0.93
PTCD3-201ENST00000254630 KRT37O76014 449 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 GH1P01241 217 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 KRT7P08729 469 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 SPARCL1Q14515 664 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 FAM102AQ5T9C2 384 aaPredicted RBP9.26□□□□□ -0.93
PTCD3-201ENST00000254630 EPM2AIP1Q7L775 607 aaPredicted RBP9.26□□□□□ -0.93
PTCD3-201ENST00000254630 SZRD1Q7Z422 152 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 NEDD1Q8NHV4 660 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 PBXIP1Q96AQ6 731 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 TSPYL2Q9H2G4 693 aaPredicted RBP9.26□□□□□ -0.93
PTCD3-201ENST00000254630 KRT82Q9NSB4 513 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 ZC3H15Q8WU90 426 aaKnown RBP9.26□□□□□ -0.93
PTCD3-201ENST00000254630 RAPGEF5Q92565 580 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 RNF25Q96BH1 459 aaPredicted RBP9.26□□□□□ -0.93
PTCD3-201ENST00000254630 PLEKHA5Q9HAU0 1116 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 ZNF609O15014 1411 aa9.26□□□□□ -0.93
PTCD3-201ENST00000254630 C19orf81C9J6K1 198 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 PSMD14O00487 310 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 NCK2O43639 380 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 FTLP02792 175 aaPredicted RBP9.25□□□□□ -0.93
PTCD3-201ENST00000254630 KITP10721 976 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 ZNF157P51786 506 aaPredicted RBP9.25□□□□□ -0.93
PTCD3-201ENST00000254630 CDC42EP5Q6NZY7 148 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 SMIM5Q71RC9 77 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 TAS2R42Q7RTR8 314 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 APPL2Q8NEU8 664 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 PFASO15067 1338 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 DCTN3O75935 186 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 ANP32DO95626 131 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 GGPS1O95749 300 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 PDCD2Q16342 344 aaPredicted RBP9.25□□□□□ -0.93
PTCD3-201ENST00000254630 ZNF280CQ8ND82 737 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 PPHLN1Q8NEY8 458 aaKnown RBP9.25□□□□□ -0.93
PTCD3-201ENST00000254630 PGBD4Q96DM1 585 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 ANLNQ9NQW6 1124 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 INTUQ9ULD6 942 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 ASAP2O43150 1006 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 ZRANB2O95218 330 aaKnown RBP eCLIP9.25□□□□□ -0.935e-6■□□□□ 9.3
PTCD3-201ENST00000254630 KRT14P02533 472 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 TMPRSS15P98073 1019 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 ANO4Q32M45 955 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 FSCBQ5H9T9 825 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 PDXDC1Q6P996 788 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 CERKQ8TCT0 537 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 TMEM106CQ9BVX2 250 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 TSSK1BQ9BXA7 367 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 TPX2Q9ULW0 747 aaKnown RBP9.25□□□□□ -0.93
PTCD3-201ENST00000254630 LRRIQ1Q96JM4 1722 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 PIK3R2O00459 728 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 CAMTA2O94983 1202 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 ESRRAP11474 423 aaPredicted RBP9.25□□□□□ -0.93
PTCD3-201ENST00000254630 STAT5BP51692 787 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 CDC42EP1Q00587 391 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 DDX53Q86TM3 631 aaKnown RBP9.25□□□□□ -0.93
PTCD3-201ENST00000254630 RNF149Q8NC42 400 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 AGPAT1Q99943 283 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 DYRK4Q9NR20 520 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 L3MBTL1Q9Y468 752 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 NBPF26B4DH59 902 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 ARHGDIAP52565 204 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 CASP8Q14790 479 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 DUOXA2Q1HG44 320 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 PRR5LQ6MZQ0 368 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 NBPF10Q6P3W6 841 aaKnown RBP9.25□□□□□ -0.93
PTCD3-201ENST00000254630 C16orf86Q6ZW13 317 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 NBPF15Q8N660 670 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 DHX35Q9H5Z1 703 aaKnown RBP9.25□□□□□ -0.93
PTCD3-201ENST00000254630 FGFR1OP2Q9NVK5 253 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 HSPBP1Q9NZL4 362 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 SNX24Q9Y343 169 aa9.25□□□□□ -0.93
PTCD3-201ENST00000254630 IQSEC2Q5JU85 1478 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms