RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 KXD1Q9BQD3 176 aa13.5□□□□□ -0.25
RFPL3-201ENST00000249007 GCOM2Q9BZD3 368 aaPredicted RBP13.5□□□□□ -0.25
RFPL3-201ENST00000249007 TCEAL9Q9UHQ7 104 aa13.5□□□□□ -0.25
RFPL3-201ENST00000249007 PRG3Q9Y2Y8 225 aaPredicted RBP13.5□□□□□ -0.25
RFPL3-201ENST00000249007 hCG_1642624A0A1W2PR95 340 aa13.49□□□□□ -0.25
RFPL3-201ENST00000249007 IPO5O00410 1097 aaKnown RBP13.49□□□□□ -0.25
RFPL3-201ENST00000249007 DHX15O43143 795 aaKnown RBP13.49□□□□□ -0.25
RFPL3-201ENST00000249007 DDAH1O94760 285 aa13.49□□□□□ -0.25
RFPL3-201ENST00000249007 C1RP00736 705 aa13.49□□□□□ -0.25
RFPL3-201ENST00000249007 ZNF76P36508 570 aa13.49□□□□□ -0.25
RFPL3-201ENST00000249007 GNAQP50148 359 aa13.49□□□□□ -0.25
RFPL3-201ENST00000249007 AFF1P51825 1210 aaKnown RBP13.49□□□□□ -0.25
RFPL3-201ENST00000249007 FZD5Q13467 585 aa13.49□□□□□ -0.25
RFPL3-201ENST00000249007 HEATR3Q7Z4Q2 680 aa13.49□□□□□ -0.25
RFPL3-201ENST00000249007 GRASPQ7Z6J2 395 aaPredicted RBP13.49□□□□□ -0.25
RFPL3-201ENST00000249007 ZNF654Q8IZM8 581 aa13.49□□□□□ -0.25
RFPL3-201ENST00000249007 CMTR1Q8N1G2 835 aaKnown RBP13.49□□□□□ -0.25
RFPL3-201ENST00000249007 SRBD1Q8N5C6 995 aaKnown RBP13.49□□□□□ -0.25
RFPL3-201ENST00000249007 PHF20Q9BVI0 1012 aa13.49□□□□□ -0.25
RFPL3-201ENST00000249007 MARCH5Q9NX47 278 aa13.49□□□□□ -0.25
RFPL3-201ENST00000249007 KANSL3Q9P2N6 904 aa13.49□□□□□ -0.25
RFPL3-201ENST00000249007 GABBR1Q9UBS5 961 aa13.49□□□□□ -0.25
RFPL3-201ENST00000249007 ZMYND10O75800 440 aa13.48□□□□□ -0.25
RFPL3-201ENST00000249007 POMCP01189 267 aa13.48□□□□□ -0.25
RFPL3-201ENST00000249007 PSAPP07602 524 aa13.48□□□□□ -0.25
RFPL3-201ENST00000249007 LIMK1P53667 647 aa13.48□□□□□ -0.25
RFPL3-201ENST00000249007 NTHL1P78549 312 aa13.48□□□□□ -0.25
RFPL3-201ENST00000249007 DSG1Q02413 1049 aa13.48□□□□□ -0.25
RFPL3-201ENST00000249007 AASDHQ4L235 1098 aaPredicted RBP13.48□□□□□ -0.25
RFPL3-201ENST00000249007 AGMOQ6ZNB7 445 aa13.48□□□□□ -0.25
RFPL3-201ENST00000249007 NIPA1Q7RTP0 329 aa13.48□□□□□ -0.25
RFPL3-201ENST00000249007 GLYCTKQ8IVS8 523 aa13.48□□□□□ -0.25
RFPL3-201ENST00000249007 SMAP1Q8IYB5 467 aaPredicted RBP13.48□□□□□ -0.25
RFPL3-201ENST00000249007 RNF168Q8IYW5 571 aaPredicted RBP13.48□□□□□ -0.25
RFPL3-201ENST00000249007 KDF1Q8NAX2 398 aaPredicted RBP13.48□□□□□ -0.25
RFPL3-201ENST00000249007 ANO3Q9BYT9 981 aa13.48□□□□□ -0.25
RFPL3-201ENST00000249007 CHRDQ9H2X0 955 aa13.48□□□□□ -0.25
RFPL3-201ENST00000249007 RSAD1Q9HA92 442 aa13.48□□□□□ -0.25
RFPL3-201ENST00000249007 PCDHB2Q9Y5E7 798 aa13.48□□□□□ -0.25
RFPL3-201ENST00000249007 PCDHA10Q9Y5I2 948 aa13.48□□□□□ -0.25
RFPL3-201ENST00000249007 LAMA5O15230 3695 aa13.48□□□□□ -0.25
RFPL3-201ENST00000249007 BPTFQ12830 3046 aa13.48□□□□□ -0.25
RFPL3-201ENST00000249007 HIP1O00291 1037 aa13.48□□□□□ -0.25
RFPL3-201ENST00000249007 TM4SF5O14894 197 aa13.48□□□□□ -0.25
RFPL3-201ENST00000249007 FOSP01100 380 aaPredicted RBP13.48□□□□□ -0.25
RFPL3-201ENST00000249007 ZNF746Q6NUN9 644 aaPredicted RBP13.48□□□□□ -0.25
RFPL3-201ENST00000249007 LILRA6Q6PI73 481 aa13.48□□□□□ -0.25
RFPL3-201ENST00000249007 MAMSTRQ6ZN01 415 aa13.48□□□□□ -0.25
RFPL3-201ENST00000249007 PLA2G4DQ86XP0 818 aa13.48□□□□□ -0.25
RFPL3-201ENST00000249007 HEBP1Q9NRV9 189 aa13.48□□□□□ -0.25
RFPL3-201ENST00000249007 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.48□□□□□ -0.25
RFPL3-201ENST00000249007 NDRG2Q9UN36 371 aaKnown RBP13.48□□□□□ -0.25
RFPL3-201ENST00000249007 FREM2Q5SZK8 3169 aa13.47□□□□□ -0.25
RFPL3-201ENST00000249007 IGSF10Q6WRI0 2623 aa13.47□□□□□ -0.25
RFPL3-201ENST00000249007 FAM86B1E9PN63 330 aa13.47□□□□□ -0.25
RFPL3-201ENST00000249007 EFEMP2O95967 443 aa13.47□□□□□ -0.25
RFPL3-201ENST00000249007 OATP04181 439 aa13.47□□□□□ -0.25
RFPL3-201ENST00000249007 FAM86B2P0C5J1 330 aa13.47□□□□□ -0.25
RFPL3-201ENST00000249007 SREBF1P36956 1147 aa13.47□□□□□ -0.25
RFPL3-201ENST00000249007 OR1G1P47890 313 aa13.47□□□□□ -0.25
RFPL3-201ENST00000249007 CCR3P51677 355 aa13.47□□□□□ -0.25
RFPL3-201ENST00000249007 CDC42EP1Q00587 391 aa13.47□□□□□ -0.25
RFPL3-201ENST00000249007 DRP2Q13474 957 aa13.47□□□□□ -0.25
RFPL3-201ENST00000249007 AAMPQ13685 434 aa13.47□□□□□ -0.25
RFPL3-201ENST00000249007 CATSPER4Q7RTX7 472 aa13.47□□□□□ -0.25
RFPL3-201ENST00000249007 NCOA7Q8NI08 942 aa13.47□□□□□ -0.25
RFPL3-201ENST00000249007 IGDCC4Q8TDY8 1250 aa13.47□□□□□ -0.25
RFPL3-201ENST00000249007 MAP4K1Q92918 833 aa13.47□□□□□ -0.25
RFPL3-201ENST00000249007 B3GALT6Q96L58 329 aa13.47□□□□□ -0.25
RFPL3-201ENST00000249007 IER2Q9BTL4 223 aa13.47□□□□□ -0.25
RFPL3-201ENST00000249007 INO80BQ9C086 356 aaPredicted RBP13.47□□□□□ -0.25
RFPL3-201ENST00000249007 CHST7Q9NS84 486 aa13.47□□□□□ -0.25
RFPL3-201ENST00000249007 NRBP2Q9NSY0 501 aa13.47□□□□□ -0.25
RFPL3-201ENST00000249007 SAMM50Q9Y512 469 aa13.47□□□□□ -0.25
RFPL3-201ENST00000249007 U3KPZ7 1027 aaPredicted RBP13.47□□□□□ -0.25
RFPL3-201ENST00000249007 CNTNAP2Q9UHC6 1331 aa13.47□□□□□ -0.25
RFPL3-201ENST00000249007 A0A087WZ62 844 aa13.46□□□□□ -0.25
RFPL3-201ENST00000249007 HRO43593 1189 aa13.46□□□□□ -0.25
RFPL3-201ENST00000249007 LRSAM1Q6UWE0 723 aa13.46□□□□□ -0.25
RFPL3-201ENST00000249007 CCDC82Q8N4S0 544 aa13.46□□□□□ -0.25
RFPL3-201ENST00000249007 C12orf50Q8NA57 414 aaPredicted RBP13.46□□□□□ -0.25
RFPL3-201ENST00000249007 FDXACB1Q9BRP7 624 aaPredicted RBP13.46□□□□□ -0.25
RFPL3-201ENST00000249007 ZNF577Q9BSK1 485 aa13.46□□□□□ -0.25
RFPL3-201ENST00000249007 RIC8AQ9NPQ8 531 aa13.46□□□□□ -0.25
RFPL3-201ENST00000249007 TBC1D22BQ9NU19 505 aa13.46□□□□□ -0.25
RFPL3-201ENST00000249007 FNIP2Q9P278 1114 aa13.46□□□□□ -0.25
RFPL3-201ENST00000249007 POLIQ9UNA4 740 aa13.46□□□□□ -0.25
RFPL3-201ENST00000249007 SPAG17Q6Q759 2223 aa13.46□□□□□ -0.26
RFPL3-201ENST00000249007 NAV2Q8IVL1 2488 aa13.45□□□□□ -0.26
RFPL3-201ENST00000249007 SHISA7A6NL88 538 aa13.45□□□□□ -0.26
RFPL3-201ENST00000249007 ZNF862O60290 1169 aa13.45□□□□□ -0.26
RFPL3-201ENST00000249007 KCNK5O95279 499 aa13.45□□□□□ -0.26
RFPL3-201ENST00000249007 HSP90AA1P07900 732 aaKnown RBP13.45□□□□□ -0.26
RFPL3-201ENST00000249007 CYP21A2P08686 494 aa13.45□□□□□ -0.26
RFPL3-201ENST00000249007 RPL17P18621 184 aaKnown RBP13.45□□□□□ -0.26
RFPL3-201ENST00000249007 CNR2P34972 360 aa13.45□□□□□ -0.26
RFPL3-201ENST00000249007 ANTXR2P58335 489 aa13.45□□□□□ -0.26
RFPL3-201ENST00000249007 PRKCEQ02156 737 aa13.45□□□□□ -0.26
RFPL3-201ENST00000249007 PDE4CQ08493 712 aa13.45□□□□□ -0.26
RFPL3-201ENST00000249007 SRSF5Q13243 272 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms