RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 B4GALT3O60512 393 aa23.36■■□□□ 1.33
HCFC1R1-201ENST00000248089 PRKCBP05771 671 aa23.36■■□□□ 1.33
HCFC1R1-201ENST00000248089 MLH1P40692 756 aa23.36■■□□□ 1.33
HCFC1R1-201ENST00000248089 PPP4R3CPQ6ZMV5 832 aa23.36■■□□□ 1.33
HCFC1R1-201ENST00000248089 KCNK18Q7Z418 384 aa23.36■■□□□ 1.33
HCFC1R1-201ENST00000248089 PRIMPOLQ96LW4 560 aa23.36■■□□□ 1.33
HCFC1R1-201ENST00000248089 PLIN2Q99541 437 aa23.36■■□□□ 1.33
HCFC1R1-201ENST00000248089 UBN1Q9NPG3 1134 aa23.36■■□□□ 1.33
HCFC1R1-201ENST00000248089 FAM50BQ9Y247 325 aa23.36■■□□□ 1.33
HCFC1R1-201ENST00000248089 HIDE1A8MVS5 230 aa23.35■■□□□ 1.33
HCFC1R1-201ENST00000248089 K7ELQ4 463 aaPredicted RBP23.35■■□□□ 1.33
HCFC1R1-201ENST00000248089 SSBP05455 408 aaKnown RBP eCLIP23.35■■□□□ 1.33
HCFC1R1-201ENST00000248089 GALTP07902 379 aa23.35■■□□□ 1.33
HCFC1R1-201ENST00000248089 SLC11A1P49279 550 aa23.35■■□□□ 1.33
HCFC1R1-201ENST00000248089 RBM10P98175 930 aaKnown RBP23.35■■□□□ 1.33
HCFC1R1-201ENST00000248089 PRPF4BQ13523 1007 aaKnown RBP23.35■■□□□ 1.33
HCFC1R1-201ENST00000248089 MAPK6Q16659 721 aa23.35■■□□□ 1.33
HCFC1R1-201ENST00000248089 ARL6IP4Q66PJ3 421 aaKnown RBP23.35■■□□□ 1.33
HCFC1R1-201ENST00000248089 GAD1Q99259 594 aa23.35■■□□□ 1.33
HCFC1R1-201ENST00000248089 RUSC1Q9BVN2 902 aa23.35■■□□□ 1.33
HCFC1R1-201ENST00000248089 FZD8Q9H461 694 aa23.35■■□□□ 1.33
HCFC1R1-201ENST00000248089 NGRNQ9NPE2 291 aaKnown RBP23.35■■□□□ 1.33
HCFC1R1-201ENST00000248089 KANSL3Q9P2N6 904 aa23.35■■□□□ 1.33
HCFC1R1-201ENST00000248089 CD207Q9UJ71 328 aa23.35■■□□□ 1.33
HCFC1R1-201ENST00000248089 BARX2Q9UMQ3 279 aaPredicted RBP23.35■■□□□ 1.33
HCFC1R1-201ENST00000248089 A0A1B0GUA9 196 aa23.34■■□□□ 1.33
HCFC1R1-201ENST00000248089 CARNS1A5YM72 827 aa23.34■■□□□ 1.33
HCFC1R1-201ENST00000248089 ARL5CA6NH57 179 aa23.34■■□□□ 1.33
HCFC1R1-201ENST00000248089 DDHD2O94830 711 aa23.34■■□□□ 1.33
HCFC1R1-201ENST00000248089 GLP2RO95838 553 aa23.34■■□□□ 1.33
HCFC1R1-201ENST00000248089 AKAP5P24588 427 aa23.34■■□□□ 1.33
HCFC1R1-201ENST00000248089 SCNN1GP51170 649 aa23.34■■□□□ 1.33
HCFC1R1-201ENST00000248089 SMC1AQ14683 1233 aaKnown RBP23.34■■□□□ 1.33
HCFC1R1-201ENST00000248089 DUSP6Q16828 381 aa23.34■■□□□ 1.33
HCFC1R1-201ENST00000248089 BCL7CQ8WUZ0 217 aaPredicted RBP23.34■■□□□ 1.33
HCFC1R1-201ENST00000248089 IGSF21Q96ID5 467 aa23.34■■□□□ 1.33
HCFC1R1-201ENST00000248089 ZFP42Q96MM3 310 aa23.34■■□□□ 1.33
HCFC1R1-201ENST00000248089 USP20Q9Y2K6 914 aa23.34■■□□□ 1.33
HCFC1R1-201ENST00000248089 MYH15Q9Y2K3 1946 aa23.33■■□□□ 1.33
HCFC1R1-201ENST00000248089 TTLL13PA6NNM8 815 aa23.33■■□□□ 1.33
HCFC1R1-201ENST00000248089 N4BP3O15049 544 aa23.33■■□□□ 1.33
HCFC1R1-201ENST00000248089 HIP1RO75146 1068 aa23.33■■□□□ 1.33
HCFC1R1-201ENST00000248089 FAM187BQ17R55 369 aa23.33■■□□□ 1.33
HCFC1R1-201ENST00000248089 LLGL2Q6P1M3 1020 aa23.33■■□□□ 1.33
HCFC1R1-201ENST00000248089 CABP7Q86V35 215 aa23.33■■□□□ 1.33
HCFC1R1-201ENST00000248089 VPS52Q8N1B4 723 aa23.33■■□□□ 1.33
HCFC1R1-201ENST00000248089 PNMA5Q96PV4 448 aa23.33■■□□□ 1.33
HCFC1R1-201ENST00000248089 CDCA3Q99618 268 aaPredicted RBP23.33■■□□□ 1.33
HCFC1R1-201ENST00000248089 CCDC113Q9H0I3 377 aa23.33■■□□□ 1.33
HCFC1R1-201ENST00000248089 NT5C3AQ9H0P0 336 aa23.33■■□□□ 1.33
HCFC1R1-201ENST00000248089 PDZD7Q9H5P4 517 aa23.33■■□□□ 1.33
HCFC1R1-201ENST00000248089 CLEC1BQ9P126 229 aa23.33■■□□□ 1.33
HCFC1R1-201ENST00000248089 PARP2Q9UGN5 583 aa23.33■■□□□ 1.33
HCFC1R1-201ENST00000248089 FSD2A1L4K1 749 aa23.32■■□□□ 1.32
HCFC1R1-201ENST00000248089 CCDC169A6NNP5 214 aa23.32■■□□□ 1.32
HCFC1R1-201ENST00000248089 MBTPS2O43462 519 aa23.32■■□□□ 1.32
HCFC1R1-201ENST00000248089 BMP15O95972 392 aa23.32■■□□□ 1.32
HCFC1R1-201ENST00000248089 SYT1P21579 422 aa23.32■■□□□ 1.32
HCFC1R1-201ENST00000248089 SSTR3P32745 418 aaPredicted RBP23.32■■□□□ 1.32
HCFC1R1-201ENST00000248089 PEX3P56589 373 aa23.32■■□□□ 1.32
HCFC1R1-201ENST00000248089 SMAD4Q13485 552 aaKnown RBP23.32■■□□□ 1.32
HCFC1R1-201ENST00000248089 BMS1Q14692 1282 aaKnown RBP23.32■■□□□ 1.32
HCFC1R1-201ENST00000248089 SF3A1Q15459 793 aaKnown RBP23.32■■□□□ 1.32
HCFC1R1-201ENST00000248089 HYIQ5T013 277 aa23.32■■□□□ 1.32
HCFC1R1-201ENST00000248089 RINT1Q6NUQ1 792 aa23.32■■□□□ 1.32
HCFC1R1-201ENST00000248089 FAM178BQ8IXR5 827 aa23.32■■□□□ 1.32
HCFC1R1-201ENST00000248089 VN1R2Q8NFZ6 395 aa23.32■■□□□ 1.32
HCFC1R1-201ENST00000248089 AUTS2Q8WXX7 1259 aa23.32■■□□□ 1.32
HCFC1R1-201ENST00000248089 DRC1Q96MC2 740 aa23.32■■□□□ 1.32
HCFC1R1-201ENST00000248089 TMEM175Q9BSA9 504 aa23.32■■□□□ 1.32
HCFC1R1-201ENST00000248089 KLK14Q9P0G3 267 aa23.32■■□□□ 1.32
HCFC1R1-201ENST00000248089 GIT1Q9Y2X7 761 aa23.32■■□□□ 1.32
HCFC1R1-201ENST00000248089 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.31■■□□□ 1.32
HCFC1R1-201ENST00000248089 EDN1P05305 212 aa23.31■■□□□ 1.32
HCFC1R1-201ENST00000248089 SRGAP2BP0DMP2 458 aa23.31■■□□□ 1.32
HCFC1R1-201ENST00000248089 EFNA5P52803 228 aa23.31■■□□□ 1.32
HCFC1R1-201ENST00000248089 RAD51AP2Q09MP3 1159 aa23.31■■□□□ 1.32
HCFC1R1-201ENST00000248089 DMP1Q13316 513 aaPredicted RBP23.31■■□□□ 1.32
HCFC1R1-201ENST00000248089 DDX53Q86TM3 631 aaKnown RBP23.31■■□□□ 1.32
HCFC1R1-201ENST00000248089 INTS4Q96HW7 963 aaKnown RBP23.31■■□□□ 1.32
HCFC1R1-201ENST00000248089 MSLNLQ96KJ4 702 aa23.31■■□□□ 1.32
HCFC1R1-201ENST00000248089 AK8Q96MA6 479 aa23.31■■□□□ 1.32
HCFC1R1-201ENST00000248089 RPS6KC1Q96S38 1066 aa23.31■■□□□ 1.32
HCFC1R1-201ENST00000248089 ADPGKQ9BRR6 497 aa23.31■■□□□ 1.32
HCFC1R1-201ENST00000248089 ZBP1Q9H171 429 aa23.31■■□□□ 1.32
HCFC1R1-201ENST00000248089 FAN1Q9Y2M0 1017 aa23.31■■□□□ 1.32
HCFC1R1-201ENST00000248089 PRG3Q9Y2Y8 225 aaPredicted RBP23.31■■□□□ 1.32
HCFC1R1-201ENST00000248089 ACKR2O00590 384 aa23.3■■□□□ 1.32
HCFC1R1-201ENST00000248089 CXCL14O95715 111 aa23.3■■□□□ 1.32
HCFC1R1-201ENST00000248089 ALDH2P05091 517 aa23.3■■□□□ 1.32
HCFC1R1-201ENST00000248089 UBA7P41226 1012 aa23.3■■□□□ 1.32
HCFC1R1-201ENST00000248089 OR1G1P47890 313 aa23.3■■□□□ 1.32
HCFC1R1-201ENST00000248089 NPTX2P47972 431 aa23.3■■□□□ 1.32
HCFC1R1-201ENST00000248089 TMEM119Q4V9L6 283 aa23.3■■□□□ 1.32
HCFC1R1-201ENST00000248089 C1orf186Q6ZWK4 172 aa23.3■■□□□ 1.32
HCFC1R1-201ENST00000248089 DAW1Q8N136 415 aa23.3■■□□□ 1.32
HCFC1R1-201ENST00000248089 MRPL43Q8N983 215 aaKnown RBP23.3■■□□□ 1.32
HCFC1R1-201ENST00000248089 TMEM87AQ8NBN3 555 aa23.3■■□□□ 1.32
HCFC1R1-201ENST00000248089 RASSF8Q8NHQ8 419 aa23.3■■□□□ 1.32
HCFC1R1-201ENST00000248089 MIOSQ9NXC5 875 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms