RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 ADRB2P07550 413 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 CYBAP13498 195 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 UCHL3P15374 230 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 SLC9A1P19634 815 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 PHKA2P46019 1235 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 POLR2FP61218 127 aaKnown RBP15.44■□□□□ 0.06
SDF2-201ENST00000247020 NKX3-2P78367 333 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 CYP24A1Q07973 514 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 DNTTIP2Q5QJE6 756 aaKnown RBP15.44■□□□□ 0.06
SDF2-201ENST00000247020 TRIM65Q6PJ69 517 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 TOGARAM2Q6ZUX3 1019 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 RRAGAQ7L523 313 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 REXO1L1PQ8IX06 675 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 MAP7D2Q96T17 732 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 FZD8Q9H461 694 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 SIX2Q9NPC8 291 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 PRMT7Q9NVM4 692 aaPredicted RBP15.44■□□□□ 0.06
SDF2-201ENST00000247020 AIPL1Q9NZN9 384 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 AGO2Q9UKV8 859 aaKnown RBP15.44■□□□□ 0.06
SDF2-201ENST00000247020 EPN1Q9Y6I3 576 aaPredicted RBP15.44■□□□□ 0.06
SDF2-201ENST00000247020 A0A0B4J269 797 aa15.43■□□□□ 0.06
SDF2-201ENST00000247020 HAS3O00219 553 aa15.43■□□□□ 0.06
SDF2-201ENST00000247020 ACKR2O00590 384 aa15.43■□□□□ 0.06
SDF2-201ENST00000247020 NDUFA10O95299 355 aa15.43■□□□□ 0.06
SDF2-201ENST00000247020 TRIM49P0CI25 452 aa15.43■□□□□ 0.06
SDF2-201ENST00000247020 TRIM49CP0CI26 452 aa15.43■□□□□ 0.06
SDF2-201ENST00000247020 CLCN3P51790 818 aa15.43■□□□□ 0.06
SDF2-201ENST00000247020 KRT83P78385 493 aa15.43■□□□□ 0.06
SDF2-201ENST00000247020 MAPK8IP2Q13387 824 aaPredicted RBP15.43■□□□□ 0.06
SDF2-201ENST00000247020 CBWD6Q4V339 395 aa15.43■□□□□ 0.06
SDF2-201ENST00000247020 CBWD3Q5JTY5 395 aa15.43■□□□□ 0.06
SDF2-201ENST00000247020 CBWD5Q5RIA9 395 aa15.43■□□□□ 0.06
SDF2-201ENST00000247020 SFMBT2Q5VUG0 894 aa15.43■□□□□ 0.06
SDF2-201ENST00000247020 ZNF410Q86VK4 478 aa15.43■□□□□ 0.06
SDF2-201ENST00000247020 CBWD2Q8IUF1 395 aa15.43■□□□□ 0.06
SDF2-201ENST00000247020 ZNF710Q8N1W2 664 aa15.43■□□□□ 0.06
SDF2-201ENST00000247020 METTL13Q8N6R0 699 aa15.43■□□□□ 0.06
SDF2-201ENST00000247020 PRIMPOLQ96LW4 560 aa15.43■□□□□ 0.06
SDF2-201ENST00000247020 CHP1Q99653 195 aa15.43■□□□□ 0.06
SDF2-201ENST00000247020 TMEM8AQ9HCN3 771 aa15.43■□□□□ 0.06
SDF2-201ENST00000247020 TRMT1Q9NXH9 659 aaKnown RBP15.43■□□□□ 0.06
SDF2-201ENST00000247020 COQ4Q9Y3A0 265 aa15.43■□□□□ 0.06
SDF2-201ENST00000247020 EIF3CLB5ME19 914 aaKnown RBP15.42■□□□□ 0.06
SDF2-201ENST00000247020 GNRH1P01148 92 aa15.42■□□□□ 0.06
SDF2-201ENST00000247020 SRGAP2CP0DJJ0 459 aa15.42■□□□□ 0.06
SDF2-201ENST00000247020 HOXD10P28358 340 aa15.42■□□□□ 0.06
SDF2-201ENST00000247020 FLT3LGP49771 235 aa15.42■□□□□ 0.06
SDF2-201ENST00000247020 MXI1P50539 228 aa15.42■□□□□ 0.06
SDF2-201ENST00000247020 IGBP1P78318 339 aa15.42■□□□□ 0.06
SDF2-201ENST00000247020 CLDN10P78369 228 aa15.42■□□□□ 0.06
SDF2-201ENST00000247020 MTF1Q14872 753 aa15.42■□□□□ 0.06
SDF2-201ENST00000247020 PSMD6Q15008 389 aa15.42■□□□□ 0.06
SDF2-201ENST00000247020 EPC2Q52LR7 807 aa15.42■□□□□ 0.06
SDF2-201ENST00000247020 C1orf220Q5T0J3 134 aa15.42■□□□□ 0.06
SDF2-201ENST00000247020 KRT39Q6A163 491 aa15.42■□□□□ 0.06
SDF2-201ENST00000247020 ZNF662Q6ZS27 426 aa15.42■□□□□ 0.06
SDF2-201ENST00000247020 EHBP1Q8NDI1 1231 aa15.42■□□□□ 0.06
SDF2-201ENST00000247020 SAAL1Q96ER3 474 aa15.42■□□□□ 0.06
SDF2-201ENST00000247020 C16orf45Q96MC5 204 aaPredicted RBP15.42■□□□□ 0.06
SDF2-201ENST00000247020 EIF3CQ99613 913 aaKnown RBP15.42■□□□□ 0.06
SDF2-201ENST00000247020 ACO2Q99798 780 aaKnown RBP15.42■□□□□ 0.06
SDF2-201ENST00000247020 MSTO1Q9BUK6 570 aa15.42■□□□□ 0.06
SDF2-201ENST00000247020 TARS2Q9BW92 718 aaKnown RBP15.42■□□□□ 0.06
SDF2-201ENST00000247020 NHEJ1Q9H9Q4 299 aaPredicted RBP15.42■□□□□ 0.06
SDF2-201ENST00000247020 BZW2Q9Y6E2 419 aaKnown RBP15.42■□□□□ 0.06
SDF2-201ENST00000247020 MBLAC1A4D2B0 266 aaPredicted RBP15.41■□□□□ 0.06
SDF2-201ENST00000247020 GOLGA8IPA6NC78 632 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 GOLGA8JA6NMD2 632 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 CLDN3O15551 220 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 ZEB2O60315 1214 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 IPO7O95373 1038 aaKnown RBP15.41■□□□□ 0.06
SDF2-201ENST00000247020 SERPING1P05155 500 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 TNNT1P13805 278 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 PROZP22891 400 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 ANXA13P27216 316 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 JAM2P57087 298 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 GJA9P57773 515 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 DLG4P78352 724 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 POU5F1Q01860 360 aaKnown RBP15.41■□□□□ 0.06
SDF2-201ENST00000247020 MBTD1Q05BQ5 628 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 MCL1Q07820 350 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 MFSD10Q14728 455 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 PCBP1Q15365 356 aaKnown RBP eCLIP15.41■□□□□ 0.06
SDF2-201ENST00000247020 SLC9C1Q4G0N8 1177 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 MARCH8Q5T0T0 291 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 TSHZ1Q6ZSZ6 1077 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 ZSWIM2Q8NEG5 633 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 PLEKHO2Q8TD55 490 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 TRIB2Q92519 343 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 KAT2BQ92831 832 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 SPAG5Q96R06 1193 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 ARHGAP39Q9C0H5 1083 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 INTS2Q9H0H0 1204 aaKnown RBP15.41■□□□□ 0.06
SDF2-201ENST00000247020 UPF3AQ9H1J1 476 aaKnown RBP15.41■□□□□ 0.06
SDF2-201ENST00000247020 NLRC4Q9NPP4 1024 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 APEX2Q9UBZ4 518 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 GABRQQ9UN88 632 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 SMIM35A0A1B0GVV1 85 aa15.41■□□□□ 0.06
SDF2-201ENST00000247020 LRRIQ3A6PVS8 624 aaPredicted RBP15.41■□□□□ 0.06
SDF2-201ENST00000247020 SEPT4O43236 478 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms