RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 GPD1LQ8N335 351 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 DIS3LQ8TF46 1054 aaKnown RBP12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 SAAL1Q96ER3 474 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 ANKRD36BP1Q96IX9 119 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 CBX8Q9HC52 389 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 PLXNB2O15031 1838 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 CAND2O75155 1236 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 DARSP14868 501 aaKnown RBP12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 MRE11P49959 708 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 ZNF445P59923 1031 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 SNX17Q15036 470 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 ADSSL1Q8N142 457 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 HAS3O00219 553 aa12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 CD52P31358 61 aa12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 FAM117BQ6P1L5 589 aa12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 ST3GAL5Q9UNP4 418 aa12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 HOXD8P13378 290 aaPredicted RBP12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 MPZL3Q6UWV2 235 aa12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 SERINC5Q86VE9 423 aa12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 ENOX1Q8TC92 643 aaKnown RBP12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 FTHL17Q9BXU8 183 aa12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 VPS16Q9H269 839 aa12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 TRIM49BA6NDI0 452 aa12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 CYP2C18P33260 490 aa12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 ZNF618Q5T7W0 954 aa12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 GLB1LQ6UWU2 654 aa12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 TMEM161BQ8NDZ6 487 aa12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 HSPBP1Q9NZL4 362 aa12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 ZMYND8Q9ULU4 1186 aaPredicted RBP12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 NUB1Q9Y5A7 615 aa12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 UBXN1Q04323 297 aa12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 C11orf57Q6ZUT1 292 aaPredicted RBP12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 INTS8Q75QN2 995 aaKnown RBP12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 ZNF397Q8NF99 534 aaPredicted RBP12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 ADAM2Q99965 735 aa12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 ZNHIT6Q9NWK9 470 aaKnown RBP12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 RBAKQ9NYW8 714 aaPredicted RBP12.12□□□□□ -0.47
TNFAIP3-201ENST00000237289 KCNJ18B7U540 433 aa12.11□□□□□ -0.47
TNFAIP3-201ENST00000237289 ATF7P17544 494 aaPredicted RBP12.11□□□□□ -0.47
TNFAIP3-201ENST00000237289 USP8P40818 1118 aa12.11□□□□□ -0.47
TNFAIP3-201ENST00000237289 ACOT2P49753 483 aa12.11□□□□□ -0.47
TNFAIP3-201ENST00000237289 KCNJ12Q14500 433 aa12.11□□□□□ -0.47
TNFAIP3-201ENST00000237289 ZPBP2Q6X784 338 aa12.11□□□□□ -0.47
TNFAIP3-201ENST00000237289 SCFD1Q8WVM8 642 aa12.11□□□□□ -0.47
TNFAIP3-201ENST00000237289 CEP63Q96MT8 703 aa12.11□□□□□ -0.47
TNFAIP3-201ENST00000237289 FANCLQ9NW38 375 aa12.11□□□□□ -0.47
TNFAIP3-201ENST00000237289 N4BP1O75113 896 aaKnown RBP12.11□□□□□ -0.47
TNFAIP3-201ENST00000237289 RAB27AP51159 221 aa12.11□□□□□ -0.47
TNFAIP3-201ENST00000237289 PPIGQ13427 754 aaKnown RBP eCLIP12.11□□□□□ -0.475e-8■■■■□ 23.6
TNFAIP3-201ENST00000237289 SLC27A1Q6PCB7 646 aa12.11□□□□□ -0.47
TNFAIP3-201ENST00000237289 CNOT6LQ96LI5 555 aaKnown RBP12.11□□□□□ -0.47
TNFAIP3-201ENST00000237289 CKBP12277 381 aa12.11□□□□□ -0.47
TNFAIP3-201ENST00000237289 GTF2BQ00403 316 aa12.11□□□□□ -0.47
TNFAIP3-201ENST00000237289 MDM2Q00987 491 aaPredicted RBP12.11□□□□□ -0.47
TNFAIP3-201ENST00000237289 UVSSAQ2YD98 709 aa12.11□□□□□ -0.47
TNFAIP3-201ENST00000237289 ZNF507Q8TCN5 953 aa12.11□□□□□ -0.47
TNFAIP3-201ENST00000237289 BSNDQ8WZ55 320 aa12.11□□□□□ -0.47
TNFAIP3-201ENST00000237289 TAB2Q9NYJ8 693 aa12.11□□□□□ -0.47
TNFAIP3-201ENST00000237289 OGTO15294 1046 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 BMS1Q14692 1282 aaKnown RBP12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 ANKRD40Q6AI12 368 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 SCLYQ96I15 445 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 PADI3Q9ULW8 664 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 HOXA2O43364 376 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 CLTAP09496 248 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 NCKAP1LP55160 1127 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 POU5F1BQ06416 359 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 EDRF1Q3B7T1 1238 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 TSHZ1Q6ZSZ6 1077 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 MAP4K3Q8IVH8 894 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 TOX2Q96NM4 488 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 AGPAT3Q9NRZ7 376 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 USP20Q9Y2K6 914 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 IPO7O95373 1038 aaKnown RBP12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 GARTP22102 1010 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 ZNF131P52739 623 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 CCDC51Q96ER9 411 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 THAP9Q9H5L6 903 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 GRPEL1Q9HAV7 217 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 NOC2LQ9Y3T9 749 aaKnown RBP12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 SPDYE4A6NLX3 237 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 KLRC4O43908 158 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 AMHP03971 560 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 P4HA1P13674 534 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 SYN1P17600 705 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 SARSP49591 514 aaKnown RBP12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 KIAA0895Q8NCT3 520 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 BEST2Q8NFU1 509 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 APBB2Q92870 758 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 SPAG5Q96R06 1193 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 CHST12Q9NRB3 414 aa12.1□□□□□ -0.47
TNFAIP3-201ENST00000237289 MCM3APO60318 1980 aa12.09□□□□□ -0.47
TNFAIP3-201ENST00000237289 RLFQ13129 1914 aa12.09□□□□□ -0.47
TNFAIP3-201ENST00000237289 MBLAC1A4D2B0 266 aaPredicted RBP12.09□□□□□ -0.47
TNFAIP3-201ENST00000237289 IKBKBO14920 756 aa12.09□□□□□ -0.47
TNFAIP3-201ENST00000237289 LPXNO60711 386 aa12.09□□□□□ -0.47
TNFAIP3-201ENST00000237289 KIF12Q96FN5 646 aa12.09□□□□□ -0.47
TNFAIP3-201ENST00000237289 ZNFX1Q9P2E3 1918 aaKnown RBP12.09□□□□□ -0.47
TNFAIP3-201ENST00000237289 EXTL3O43909 919 aa12.09□□□□□ -0.47
TNFAIP3-201ENST00000237289 MCF2P10911 925 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms