RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 RCOR1Q9UKL0 485 aa15.74■□□□□ 0.11
UBR5-201ENST00000220959 USP17L10C9JJH3 530 aa15.74■□□□□ 0.11
UBR5-201ENST00000220959 H0Y626 953 aa15.74■□□□□ 0.11
UBR5-201ENST00000220959 SRGAP2O75044 1071 aa15.74■□□□□ 0.11
UBR5-201ENST00000220959 SUPT3HO75486 399 aa15.74■□□□□ 0.11
UBR5-201ENST00000220959 TRIM16O95361 564 aa15.74■□□□□ 0.11
UBR5-201ENST00000220959 NR3C1P04150 777 aa15.74■□□□□ 0.11
UBR5-201ENST00000220959 LCP1P13796 627 aa15.74■□□□□ 0.11
UBR5-201ENST00000220959 HSD17B4P51659 736 aa15.74■□□□□ 0.11
UBR5-201ENST00000220959 SH3RF3Q8TEJ3 882 aaPredicted RBP15.74■□□□□ 0.11
UBR5-201ENST00000220959 KIF2CQ99661 725 aa15.74■□□□□ 0.11
UBR5-201ENST00000220959 FAM32AQ9Y421 112 aaKnown RBP15.74■□□□□ 0.11
UBR5-201ENST00000220959 GFAPP14136 432 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 TRIM72Q6ZMU5 477 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 C11orf70Q9BRQ4 267 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 NPC1L1Q9UHC9 1359 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 ZBTB5O15062 677 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 ZNF189O75820 626 aaPredicted RBP15.73■□□□□ 0.11
UBR5-201ENST00000220959 BEND6Q5SZJ8 279 aaPredicted RBP15.73■□□□□ 0.11
UBR5-201ENST00000220959 FAM182BQ5T319 152 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 PID1Q7Z2X4 250 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 RAET1EQ8TD07 263 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 SCFD1Q8WVM8 642 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.73■□□□□ 0.11
UBR5-201ENST00000220959 ABCB11O95342 1321 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 MAST1Q9Y2H9 1570 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 KCNQ4P56696 695 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 CDK17Q00537 523 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 HIST1H2AGP0C0S8 130 aaPredicted RBP15.73■□□□□ 0.11
UBR5-201ENST00000220959 HIST1H2ADP20671 130 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 TAP1Q03518 808 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 HIST1H2AHQ96KK5 128 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 HIST1H2AJQ99878 128 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 H2AFJQ9BTM1 129 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 ABCE1P61221 599 aaKnown RBP15.73■□□□□ 0.11
UBR5-201ENST00000220959 ZNF507Q8TCN5 953 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 OPTNQ96CV9 577 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 BRIP1Q9BX63 1249 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 GIMAP4Q9NUV9 329 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 PMS2P54278 862 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 DNAJC7Q99615 494 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 OLFML3Q9NRN5 406 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 A0A087WWV3 80 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 KCNJ6P48051 423 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 FAM20AQ96MK3 541 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 H2AFY2Q9P0M6 372 aaPredicted RBP15.73■□□□□ 0.11
UBR5-201ENST00000220959 NFKBIL1Q9UBC1 381 aaPredicted RBP15.73■□□□□ 0.11
UBR5-201ENST00000220959 GABBR1Q9UBS5 961 aa15.73■□□□□ 0.11
UBR5-201ENST00000220959 CHUKO15111 745 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 QARSP47897 775 aaKnown RBP15.72■□□□□ 0.11
UBR5-201ENST00000220959 CYP4F11Q9HBI6 524 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 STOML1Q9UBI4 398 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 HAUS5O94927 633 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 STAT3P40763 770 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 MTIF3Q9H2K0 278 aaKnown RBP15.72■□□□□ 0.11
UBR5-201ENST00000220959 ABCB6Q9NP58 842 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 LSM7Q9UK45 103 aaKnown RBP15.72■□□□□ 0.11
UBR5-201ENST00000220959 ORC4O43929 436 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 TADA2AO75478 443 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 CCDC159P0C7I6 412 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 KCNH2Q12809 1159 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 OSBP2Q969R2 916 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 TDRD3Q9H7E2 651 aaKnown RBP15.72■□□□□ 0.11
UBR5-201ENST00000220959 ZNF556Q9HAH1 456 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 ARFIP2P53365 341 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 PDAP1Q13442 181 aaKnown RBP15.72■□□□□ 0.11
UBR5-201ENST00000220959 DUOXA2Q1HG44 320 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 ZNF668Q96K58 619 aaPredicted RBP15.72■□□□□ 0.11
UBR5-201ENST00000220959 BSDC1Q9NW68 430 aaPredicted RBP15.72■□□□□ 0.11
UBR5-201ENST00000220959 MMP10P09238 476 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 FAM161BQ96MY7 647 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 TMEM106CQ9BVX2 250 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 PARVAQ9NVD7 372 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 APOL1O14791 398 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 TRAPPC3O43617 180 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 PLEKHA8P1O95397 391 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 SFR1Q86XK3 245 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 PSMD3O43242 534 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 MYBL1P10243 752 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 PGBD4Q96DM1 585 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 ZNF560Q96MR9 790 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 AP3B1O00203 1094 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 TNIP3Q96KP6 325 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 WNT8AQ9H1J5 351 aa15.72■□□□□ 0.11
UBR5-201ENST00000220959 PDIA2Q13087 525 aaKnown RBP15.71■□□□□ 0.11
UBR5-201ENST00000220959 TRADDQ15628 312 aa15.71■□□□□ 0.11
UBR5-201ENST00000220959 RBAKQ9NYW8 714 aaPredicted RBP15.71■□□□□ 0.11
UBR5-201ENST00000220959 P4HBP07237 508 aaKnown RBP15.71■□□□□ 0.11
UBR5-201ENST00000220959 LIFRP42702 1097 aa15.71■□□□□ 0.11
UBR5-201ENST00000220959 ENOSF1Q7L5Y1 443 aa15.71■□□□□ 0.11
UBR5-201ENST00000220959 GPR101Q96P66 508 aaPredicted RBP15.71■□□□□ 0.11
UBR5-201ENST00000220959 RNF146Q9NTX7 359 aa15.71■□□□□ 0.11
UBR5-201ENST00000220959 CFAP43Q8NDM7 1665 aa15.71■□□□□ 0.11
UBR5-201ENST00000220959 PER1O15534 1290 aaPredicted RBP15.71■□□□□ 0.11
UBR5-201ENST00000220959 CCDC22O60826 627 aa15.71■□□□□ 0.11
UBR5-201ENST00000220959 VCAM1P19320 739 aa15.71■□□□□ 0.11
UBR5-201ENST00000220959 ZNF555Q8NEP9 628 aa15.71■□□□□ 0.11
UBR5-201ENST00000220959 TTLL11Q8NHH1 800 aa15.71■□□□□ 0.11
UBR5-201ENST00000220959 IMPDH2P12268 514 aa15.71■□□□□ 0.11
UBR5-201ENST00000220959 GPSM2P81274 684 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms