RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 RHOXF2BP0C7M4 288 aa32.18■■■□□ 2.74
PABPN1-201ENST00000216727 GLRA2P23416 452 aa32.18■■■□□ 2.74
PABPN1-201ENST00000216727 CYP24A1Q07973 514 aa32.18■■■□□ 2.74
PABPN1-201ENST00000216727 NFRKBQ6P4R8 1299 aa32.18■■■□□ 2.74
PABPN1-201ENST00000216727 SHCBP1Q8NEM2 672 aa32.18■■■□□ 2.74
PABPN1-201ENST00000216727 MORC4Q8TE76 937 aa32.18■■■□□ 2.74
PABPN1-201ENST00000216727 COG1Q8WTW3 980 aa32.18■■■□□ 2.74
PABPN1-201ENST00000216727 RHOXF2Q9BQY4 288 aa32.18■■■□□ 2.74
PABPN1-201ENST00000216727 LRRIQ3A6PVS8 624 aaPredicted RBP32.17■■■□□ 2.74
PABPN1-201ENST00000216727 TCF7P36402 384 aaPredicted RBP32.17■■■□□ 2.74
PABPN1-201ENST00000216727 LY6KQ17RY6 165 aa32.17■■■□□ 2.74
PABPN1-201ENST00000216727 EEPD1Q7L9B9 569 aa32.17■■■□□ 2.74
PABPN1-201ENST00000216727 ARHGEF19Q8IW93 802 aa32.17■■■□□ 2.74
PABPN1-201ENST00000216727 ASAP3Q8TDY4 903 aa32.17■■■□□ 2.74
PABPN1-201ENST00000216727 GTF3C2Q8WUA4 911 aaPredicted RBP32.17■■■□□ 2.74
PABPN1-201ENST00000216727 BICD1Q96G01 975 aa32.17■■■□□ 2.74
PABPN1-201ENST00000216727 KIAA1586Q9HCI6 787 aa32.17■■■□□ 2.74
PABPN1-201ENST00000216727 STYXL1Q9Y6J8 313 aa32.17■■■□□ 2.74
PABPN1-201ENST00000216727 SPDYE4A6NLX3 237 aa32.17■■■□□ 2.74
PABPN1-201ENST00000216727 MEI1Q5TIA1 1274 aa32.17■■■□□ 2.74
PABPN1-201ENST00000216727 CCDC127Q96BQ5 260 aa32.17■■■□□ 2.74
PABPN1-201ENST00000216727 FAM167AQ96KS9 214 aa32.17■■■□□ 2.74
PABPN1-201ENST00000216727 GRID2IPA4D2P6 1211 aa32.16■■■□□ 2.74
PABPN1-201ENST00000216727 KIAA0391O15091 583 aaKnown RBP32.16■■■□□ 2.74
PABPN1-201ENST00000216727 NCK2O43639 380 aa32.16■■■□□ 2.74
PABPN1-201ENST00000216727 PIGRP01833 764 aa32.16■■■□□ 2.74
PABPN1-201ENST00000216727 ERVK-9P63128 1117 aa32.16■■■□□ 2.74
PABPN1-201ENST00000216727 STRN3Q13033 797 aa32.16■■■□□ 2.74
PABPN1-201ENST00000216727 U2AF1L4Q8WU68 220 aaKnown RBP32.16■■■□□ 2.74
PABPN1-201ENST00000216727 RNF14Q9UBS8 474 aa32.16■■■□□ 2.74
PABPN1-201ENST00000216727 PNMA3Q9UL41 463 aa32.16■■■□□ 2.74
PABPN1-201ENST00000216727 ARIH2O95376 493 aa32.16■■■□□ 2.74
PABPN1-201ENST00000216727 WDR93Q6P2C0 686 aa32.16■■■□□ 2.74
PABPN1-201ENST00000216727 GLYCTKQ8IVS8 523 aa32.16■■■□□ 2.74
PABPN1-201ENST00000216727 SLC10A4Q96EP9 437 aa32.16■■■□□ 2.74
PABPN1-201ENST00000216727 LIG4P49917 911 aa32.15■■■□□ 2.74
PABPN1-201ENST00000216727 GPC3P51654 580 aa32.15■■■□□ 2.74
PABPN1-201ENST00000216727 AZI2Q9H6S1 392 aa32.15■■■□□ 2.74
PABPN1-201ENST00000216727 LRRN2O75325 713 aa32.14■■■□□ 2.74
PABPN1-201ENST00000216727 MAP2K1Q02750 393 aaPredicted RBP32.14■■■□□ 2.74
PABPN1-201ENST00000216727 CELF3Q5SZQ8 465 aaKnown RBP32.14■■■□□ 2.74
PABPN1-201ENST00000216727 DEPTORQ8TB45 409 aa32.14■■■□□ 2.74
PABPN1-201ENST00000216727 SIP14410 1827 aa32.14■■■□□ 2.74
PABPN1-201ENST00000216727 EXTL3O43909 919 aa32.14■■■□□ 2.74
PABPN1-201ENST00000216727 MAFO75444 373 aaPredicted RBP32.14■■■□□ 2.74
PABPN1-201ENST00000216727 LGR5O75473 907 aa32.14■■■□□ 2.74
PABPN1-201ENST00000216727 SEC31AO94979 1220 aaKnown RBP32.14■■■□□ 2.74
PABPN1-201ENST00000216727 GPR20Q99678 358 aa32.14■■■□□ 2.74
PABPN1-201ENST00000216727 TARSL2A2RTX5 802 aaKnown RBP32.13■■■□□ 2.73
PABPN1-201ENST00000216727 ZNF233A6NK53 670 aa32.13■■■□□ 2.73
PABPN1-201ENST00000216727 ERLIN1O75477 346 aa32.12■■■□□ 2.73
PABPN1-201ENST00000216727 TNFAIP3P21580 790 aa32.12■■■□□ 2.73
PABPN1-201ENST00000216727 LRRC57Q8N9N7 239 aa32.12■■■□□ 2.73
PABPN1-201ENST00000216727 FBXL13Q8NEE6 735 aa32.12■■■□□ 2.73
PABPN1-201ENST00000216727 BBXQ8WY36 941 aaPredicted RBP32.12■■■□□ 2.73
PABPN1-201ENST00000216727 SEMA4DQ92854 862 aa32.12■■■□□ 2.73
PABPN1-201ENST00000216727 TMEM134Q9H6X4 195 aa32.12■■■□□ 2.73
PABPN1-201ENST00000216727 LRRIQ4A6NIV6 560 aa32.12■■■□□ 2.73
PABPN1-201ENST00000216727 K7ERI5 159 aa32.12■■■□□ 2.73
PABPN1-201ENST00000216727 FTCDO95954 541 aa32.12■■■□□ 2.73
PABPN1-201ENST00000216727 GALCP54803 685 aa32.12■■■□□ 2.73
PABPN1-201ENST00000216727 CCDC62Q6P9F0 684 aa32.12■■■□□ 2.73
PABPN1-201ENST00000216727 MMGT1Q8N4V1 131 aa32.12■■■□□ 2.73
PABPN1-201ENST00000216727 POP1Q99575 1024 aaKnown RBP32.12■■■□□ 2.73
PABPN1-201ENST00000216727 FAM213AQ9BRX8 229 aa32.12■■■□□ 2.73
PABPN1-201ENST00000216727 CXCR5P32302 372 aa32.11■■■□□ 2.73
PABPN1-201ENST00000216727 CLDN10P78369 228 aa32.11■■■□□ 2.73
PABPN1-201ENST00000216727 SLFN12LQ6IEE8 588 aa32.11■■■□□ 2.73
PABPN1-201ENST00000216727 PLPPR4Q7Z2D5 763 aa32.11■■■□□ 2.73
PABPN1-201ENST00000216727 KRT222Q8N1A0 295 aa32.11■■■□□ 2.73
PABPN1-201ENST00000216727 AGPAT1Q99943 283 aa32.11■■■□□ 2.73
PABPN1-201ENST00000216727 TBC1D8O95759 1140 aa32.1■■■□□ 2.73
PABPN1-201ENST00000216727 TMEM253P0C7T8 217 aa32.1■■■□□ 2.73
PABPN1-201ENST00000216727 PAFAH1B1P43034 410 aa32.1■■■□□ 2.73
PABPN1-201ENST00000216727 NOP2P46087 812 aaKnown RBP32.1■■■□□ 2.73
PABPN1-201ENST00000216727 MFAP3P55082 362 aa32.1■■■□□ 2.73
PABPN1-201ENST00000216727 VSNL1P62760 191 aa32.1■■■□□ 2.73
PABPN1-201ENST00000216727 CBX1P83916 185 aa32.1■■■□□ 2.73
PABPN1-201ENST00000216727 HSDL1Q3SXM5 330 aa32.1■■■□□ 2.73
PABPN1-201ENST00000216727 CCDC181Q5TID7 509 aa32.1■■■□□ 2.73
PABPN1-201ENST00000216727 FAM71AQ8IYT1 594 aa32.1■■■□□ 2.73
PABPN1-201ENST00000216727 SPATA4Q8NEY3 305 aa32.1■■■□□ 2.73
PABPN1-201ENST00000216727 TPCN2Q8NHX9 752 aa32.1■■■□□ 2.73
PABPN1-201ENST00000216727 LMBR1Q8WVP7 490 aa32.1■■■□□ 2.73
PABPN1-201ENST00000216727 PSPC1Q8WXF1 523 aaKnown RBP32.1■■■□□ 2.73
PABPN1-201ENST00000216727 RAB20Q9NX57 234 aa32.1■■■□□ 2.73
PABPN1-201ENST00000216727 MCM3P25205 808 aa32.1■■■□□ 2.73
PABPN1-201ENST00000216727 LONRF2Q1L5Z9 754 aa32.1■■■□□ 2.73
PABPN1-201ENST00000216727 WDR78Q5VTH9 848 aa32.1■■■□□ 2.73
PABPN1-201ENST00000216727 SV2AQ7L0J3 742 aa32.1■■■□□ 2.73
PABPN1-201ENST00000216727 DNAAF5Q86Y56 855 aa32.1■■■□□ 2.73
PABPN1-201ENST00000216727 PSMB7Q99436 277 aa32.1■■■□□ 2.73
PABPN1-201ENST00000216727 SLC45A1Q9Y2W3 748 aa32.1■■■□□ 2.73
PABPN1-201ENST00000216727 ZNFX1Q9P2E3 1918 aaKnown RBP32.09■■■□□ 2.73
PABPN1-201ENST00000216727 NCANO14594 1321 aa32.09■■■□□ 2.73
PABPN1-201ENST00000216727 NOP56O00567 594 aaKnown RBP32.09■■■□□ 2.73
PABPN1-201ENST00000216727 EXOC8Q8IYI6 725 aa32.09■■■□□ 2.73
PABPN1-201ENST00000216727 TAS1R2Q8TE23 839 aa32.09■■■□□ 2.73
PABPN1-201ENST00000216727 SHC3Q92529 594 aa32.09■■■□□ 2.73
PABPN1-201ENST00000216727 KREMEN1Q96MU8 473 aa32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms