RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 A0A0A6YYK5 440 aaPredicted RBP8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 UBA1P22314 1058 aaKnown RBP8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 GYS2P54840 703 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 FMNL3Q8IVF7 1028 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 SLC35G2Q8TBE7 412 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 CTNNBL1Q8WYA6 563 aaPredicted RBP8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 SELENOOQ9BVL4 669 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 FHDC1Q9C0D6 1143 aaPredicted RBP8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 THAP2Q9H0W7 228 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 ACP6Q9NPH0 428 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 STIM2Q9P246 746 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 IRX3P78415 501 aaPredicted RBP8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 KRT39Q6A163 491 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 RIOX2Q8IUF8 465 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 CCDC102AQ96A19 550 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 ARHGEF26Q96DR7 871 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 AGPAT1Q99943 283 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 FAM213AQ9BRX8 229 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 DAAM1Q9Y4D1 1078 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 ZNFX1Q9P2E3 1918 aaKnown RBP8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 A0A0U1RQG5 324 aaPredicted RBP8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 ZSCAN5CA6NGD5 496 aaPredicted RBP8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 OATP04181 439 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 TMEM253P0C7T8 217 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 ICAM3P32942 547 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 GPS2Q13227 327 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 TAF3Q5VWG9 929 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 TAS1R2Q8TE23 839 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 RFFLQ8WZ73 363 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 KREMEN1Q96MU8 473 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 ARHGAP28Q9P2N2 729 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 MAFBQ9Y5Q3 323 aaPredicted RBP8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 NCANO14594 1321 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 SOWAHBA6NEL2 793 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 CEP104O60308 925 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 BUB1BO60566 1050 aaPredicted RBP8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 IREB2P48200 963 aaKnown RBP8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 CYP24A1Q07973 514 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 ZNF771Q7L3S4 317 aaPredicted RBP8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 RPUSD2Q8IZ73 545 aaKnown RBP8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 GPD1LQ8N335 351 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 USP38Q8NB14 1042 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 FBXL18Q96ME1 805 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 KRT12Q99456 494 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 TMEM8AQ9HCN3 771 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 FBXO40Q9UH90 709 aa8.63□□□□□ -1.03
HMGXB4-201ENST00000216106 LRRC37A2A6NM11 1700 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 SGPL1O95470 568 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 RTP1P59025 263 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 TTLL12Q14166 644 aaPredicted RBP8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 BRDTQ58F21 947 aaPredicted RBP8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 LMBRD2Q68DH5 695 aaPredicted RBP8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 SLFN11Q7Z7L1 901 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 NT5DC3Q86UY8 548 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 METTL13Q8N6R0 699 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 LMBR1Q8WVP7 490 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 ASCC2Q9H1I8 757 aaPredicted RBP8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 A0A0G2JLL6 359 aaPredicted RBP8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 ESYT3A0FGR9 886 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 LRRIQ4A6NIV6 560 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 CYP26A1O43174 497 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 PHACTR2O75167 634 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 FARP2O94887 1054 aaPredicted RBP8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 ATG7O95352 703 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 GLI1P08151 1106 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 LIG4P49917 911 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 PRRT2Q7Z6L0 340 aaPredicted RBP8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 SLC47A2Q86VL8 602 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 SYCE1Q8N0S2 351 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 FBXL13Q8NEE6 735 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 ASAP3Q8TDY4 903 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 EPS8L1Q8TE68 723 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 AENQ8WTP8 325 aaKnown RBP8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 MFSD14AQ96MC6 490 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 PI4K2AQ9BTU6 479 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 HPCAL4Q9UM19 191 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 MCM3APO60318 1980 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 ANKRD62A6NC57 917 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 PMM2O15305 246 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 HEXIM1O94992 359 aaKnown RBP8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 PGK2P07205 417 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 SV2AQ7L0J3 742 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 NOP9Q86U38 636 aaKnown RBP8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 KLHL7Q8IXQ5 586 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 MSL3Q8N5Y2 521 aaKnown RBP8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 SLC7A3Q8WY07 619 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 PCYT2Q99447 389 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 DHX33Q9H6R0 707 aaKnown RBP8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 RAB20Q9NX57 234 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 CHORDC1Q9UHD1 332 aaPredicted RBP8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 COG5Q9UP83 839 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 STXBP5LQ9Y2K9 1186 aa8.62□□□□□ -1.03
HMGXB4-201ENST00000216106 FTLP02792 175 aaPredicted RBP8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 ZBTB48P10074 688 aaPredicted RBP8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 GARTP22102 1010 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 GLRA2P23416 452 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 LY6KQ17RY6 165 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 SND1Q7KZF4 910 aaKnown RBP eCLIP8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 FAM71AQ8IYT1 594 aa8.61□□□□□ -1.03
HMGXB4-201ENST00000216106 PROCA1Q8NCQ7 364 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms