RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 ING2Q9H160 280 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 ADNPQ9H2P0 1102 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.65□□□□□ -1.83
NEB-201ENST00000172853 COG1Q8WTW3 980 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 CABS1Q96KC9 395 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 RMDN2Q96LZ7 410 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 NUDT12Q9BQG2 462 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 CASP6P55212 293 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 TRADDQ15628 312 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 ALFQ53S48 1182 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 CDK20Q8IZL9 346 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 CAMKK2Q96RR4 588 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 THUMPD2Q9BTF0 503 aaKnown RBP3.65□□□□□ -1.83
NEB-201ENST00000172853 SLC38A7Q9NVC3 462 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 GTF2A1LQ9UNN4 478 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 F6X3S4 739 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 TOM1L1O75674 476 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 ZFXP17010 805 aaPredicted RBP3.65□□□□□ -1.83
NEB-201ENST00000172853 ZC2HC1CQ53FD0 456 aaPredicted RBP3.65□□□□□ -1.83
NEB-201ENST00000172853 KIRREL3Q8IZU9 778 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 IGSF22Q8N9C0 903 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 CYP26B1Q9NR63 512 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 CLRN2A0PK11 232 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 TPD52L2O43399 206 aaKnown RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 ADCY5O95622 1261 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 IRF1P10914 325 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 ALDH7A1P49419 539 aaKnown RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 SCNN1DP51172 638 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 IL2P60568 153 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 NFIAQ12857 509 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 FOXR1Q6PIV2 292 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 KDELC2Q7Z4H8 507 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 TRMT44Q8IYL2 757 aaKnown RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 FATE1Q969F0 183 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 REXO4Q9GZR2 422 aaKnown RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 KLHL31Q9H511 634 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 USP18Q9UMW8 372 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 SESN1Q9Y6P5 492 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 FLT1P17948 1338 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 WDR47O94967 919 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 TRIM16O95361 564 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 PGK2P07205 417 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 CAPN1P07384 714 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 CAPN2P17655 700 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 CAPN10Q9HC96 672 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 RBM7Q9Y580 266 aaKnown RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 MLYCDO95822 493 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 CTSEP14091 401 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 SMARCA1P28370 1054 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 PSMC2P35998 433 aaKnown RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 GNA13Q14344 377 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 BEND3Q5T5X7 828 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 C9orf131Q5VYM1 1079 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 FOXP4Q8IVH2 680 aaPredicted RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 HDDC3Q8N4P3 179 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 PLBD2Q8NHP8 589 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 GFM2Q969S9 779 aaKnown RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 TESCQ96BS2 214 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 PRRG3Q9BZD7 231 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 FAM47DPA6NHR8 397 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 CMA1P23946 247 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 SERPINB10P48595 397 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 AP1S2P56377 157 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 PHACTR4Q8IZ21 702 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 PDCD10Q9BUL8 212 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 PLA2G4CQ9UP65 541 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 ERBB4Q15303 1308 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 CNPP09543 421 aaKnown RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 BMP3P12645 472 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 TNFRSF8P28908 595 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 HSD17B3P37058 310 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 CYP27A1Q02318 531 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 CAMK2GQ13555 558 aaPredicted RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 BYSLQ13895 437 aaKnown RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 TTLL9Q3SXZ7 439 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 FRMD8Q9BZ67 464 aaPredicted RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 VPS16Q9H269 839 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 POLR3EQ9NVU0 708 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 SOS1Q07889 1333 aaPredicted RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 ITIH2P19823 946 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 NEK2P51955 445 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 HSDL2Q6YN16 418 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 MSTO1Q9BUK6 570 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 GTSE1Q9NYZ3 720 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 HCN3Q9P1Z3 774 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 MAP3K5Q99683 1374 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 FRMPD2Q68DX3 1309 aaPredicted RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 KCNB1Q14721 858 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 TCEA2Q15560 299 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 MEA1Q16626 185 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 FAM117BQ6P1L5 589 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 DSG4Q86SJ6 1040 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 WDR75Q8IWA0 830 aaKnown RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.64□□□□□ -1.83
NEB-201ENST00000172853 MGARPQ8TDB4 240 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 ACSF2Q96CM8 615 aaPredicted RBP3.64□□□□□ -1.83
NEB-201ENST00000172853 LRRC2Q9BYS8 371 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 NDUFAB1O14561 156 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 SUPT20HL2P0C7V6 817 aa3.64□□□□□ -1.83
NEB-201ENST00000172853 MARK3P27448 753 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms