RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Gm5936A2BG95 728 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Gm5640A3KG49 728 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Skor2A7M7C7 1008 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Cacna2d1O08532 1103 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Parp2O88554 559 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Casp14O89094 257 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Phka1P18826 1241 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Bmp2P21274 394 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Cacnb3P54285 484 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 GalcP54818 684 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Foxp2P58463 714 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 AaasP58742 546 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 rp9P97762 213 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Igsf9Q05BQ1 1179 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Slc10a5Q5PT54 434 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Gbp4Q61107 620 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Dlg4Q62108 724 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Ddx31Q6NZQ2 687 aaKnown RBP17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Foxo6Q70KY4 559 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 PolrmtQ8BKF1 1207 aaKnown RBP17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Trim47Q8C0E3 641 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Acat1Q8QZT1 424 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Dnajc28Q8VCE1 385 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Q99KU6 348 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Cmtm5Q9D6G9 156 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Prkab1Q9R078 270 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Extl3Q9WVL6 918 aa17.3■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 LdhbP16125 334 aaKnown RBP17.29■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 ArP19091 899 aa17.29■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Gtf2bP62915 316 aa17.29■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 OgdhQ60597 1023 aaKnown RBP17.29■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Tshz2Q68FE9 1030 aa17.29■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Styk1Q6J9G1 429 aa17.29■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Tas2r134Q7TQB0 298 aa17.29■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Bicd1Q8BR07 835 aa17.29■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Rint1Q8BZ36 792 aa17.29■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Pih1h3bQ8C6P5 218 aa17.29■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 C130026I21RikQ8C898 291 aa17.29■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Actl9Q8CG27 415 aa17.29■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Znf830Q8R1N0 363 aaKnown RBP17.29■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Bst2Q8R2Q8 172 aa17.29■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Q922C1 641 aa17.29■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Med24Q99K74 987 aa17.29■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Cntn6Q9JMB8 1028 aa17.29■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Mmrn2A6H6E2 943 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Myo1eE9Q634 1107 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Kcnk16G5E845 292 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Ppp1r9aH3BJD6 1292 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Gm5814J3QP80 125 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Trmt1Q3TX08 663 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Bpifb5Q3UQ05 490 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Atp13a3Q5XF89 1219 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 FancbQ5XJY6 703 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Ntrk3Q6VNS1 825 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Calhm6Q8C9E8 313 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Slc26a6Q8CIW6 758 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Gimap4Q99JY3 219 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Pls3Q99K51 630 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Mrfap1Q9CQL7 125 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Trmt10bQ9D075 318 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Cpb2Q9JHH6 422 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Myoz2Q9JJW5 264 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Rnf25Q9QZR0 456 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Spata31d1aE9QA35 1336 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Myo5aQ99104 1853 aaKnown RBP17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Vmn2r63E9Q0K5 859 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Gm9268E9Q0M3 861 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Vmn2r62K7N712 859 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Chrna5Q2MKA5 467 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Gxylt1Q3UHH8 404 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Ano5Q75UR0 904 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Tmem117Q8BH18 514 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Mageb18Q8BQR7 327 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Skor1Q8BX46 964 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Vmn1r64Q8R2B8 320 aa17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Hspbp1Q99P31 357 aaKnown RBP17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 IkQ9Z1M8 557 aaKnown RBP17.28■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Megf6Q80V70 1572 aa17.27■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Xbp1O35426 267 aa17.27■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Pik3caP42337 1068 aa17.27■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Mier3Q3UHF3 551 aa17.27■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Ice2Q3UZ18 988 aaKnown RBP17.27■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Rgl1Q60695 768 aa17.27■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Tcf12Q61286 706 aa17.27■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 WlsQ6DID7 541 aa17.27■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Rusc1Q8BG26 893 aa17.27■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Q8VDP2 222 aa17.27■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Med15Q924H2 789 aa17.27■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Ccdc182Q9D9C6 152 aa17.27■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Scn3aA2ASI5 1947 aa17.27■□□□□ 0.36
Ttc39b-202ENSMUST00000048274 Gm45194A0A140LJG2 572 aa17.26■□□□□ 0.35
Ttc39b-202ENSMUST00000048274 Mms22lB1AUR6 1238 aa17.26■□□□□ 0.35
Ttc39b-202ENSMUST00000048274 Prdm15E9Q8T2 1174 aa17.26■□□□□ 0.35
Ttc39b-202ENSMUST00000048274 NppbP40753 121 aa17.26■□□□□ 0.35
Ttc39b-202ENSMUST00000048274 Brd9Q3UQU0 596 aaKnown RBP17.26■□□□□ 0.35
Ttc39b-202ENSMUST00000048274 Abl2Q4JIM5 1182 aa17.26■□□□□ 0.35
Ttc39b-202ENSMUST00000048274 Miga1Q4QQM5 600 aa17.26■□□□□ 0.35
Ttc39b-202ENSMUST00000048274 SkiQ60698 725 aa17.26■□□□□ 0.35
Ttc39b-202ENSMUST00000048274 Sh3d21Q7TSG5 549 aa17.26■□□□□ 0.35
Ttc39b-202ENSMUST00000048274 Llgl1Q80Y17 1036 aa17.26■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms