RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 SLFN12LQ6IEE8 588 aa14.2□□□□□ -0.14
PHGDH-220ENST00000641570 ARMCX5Q6P1M9 558 aa14.2□□□□□ -0.14
PHGDH-220ENST00000641570 NOTUMQ6P988 496 aa14.2□□□□□ -0.14
PHGDH-220ENST00000641570 PPP4R3CPQ6ZMV5 832 aa14.2□□□□□ -0.14
PHGDH-220ENST00000641570 MAP4K3Q8IVH8 894 aa14.2□□□□□ -0.14
PHGDH-220ENST00000641570 SMYD4Q8IYR2 804 aaPredicted RBP14.2□□□□□ -0.14
PHGDH-220ENST00000641570 ANKRD20A12PQ8NF67 263 aa14.2□□□□□ -0.14
PHGDH-220ENST00000641570 NELFBQ8WX92 580 aa14.2□□□□□ -0.14
PHGDH-220ENST00000641570 SEPT8Q92599 483 aa14.2□□□□□ -0.14
PHGDH-220ENST00000641570 NTPCRQ9BSD7 190 aaKnown RBP14.2□□□□□ -0.14
PHGDH-220ENST00000641570 NOC4LQ9BVI4 516 aaKnown RBP14.2□□□□□ -0.14
PHGDH-220ENST00000641570 ADAMTS10Q9H324 1103 aa14.2□□□□□ -0.14
PHGDH-220ENST00000641570 RNF216Q9NWF9 866 aaPredicted RBP14.2□□□□□ -0.14
PHGDH-220ENST00000641570 MAGEC2Q9UBF1 373 aaPredicted RBP14.2□□□□□ -0.14
PHGDH-220ENST00000641570 KAT6AQ92794 2004 aa14.2□□□□□ -0.14
PHGDH-220ENST00000641570 SMTNL1A8MU46 457 aa14.19□□□□□ -0.14
PHGDH-220ENST00000641570 ACKR2O00590 384 aa14.19□□□□□ -0.14
PHGDH-220ENST00000641570 TPM2P07951 284 aa14.19□□□□□ -0.14
PHGDH-220ENST00000641570 CCL23P55773 120 aa14.19□□□□□ -0.14
PHGDH-220ENST00000641570 MBTD1Q05BQ5 628 aa14.19□□□□□ -0.14
PHGDH-220ENST00000641570 LRRC63Q05C16 580 aa14.19□□□□□ -0.14
PHGDH-220ENST00000641570 ZNF568Q3ZCX4 644 aa14.19□□□□□ -0.14
PHGDH-220ENST00000641570 ANO6Q4KMQ2 910 aa14.19□□□□□ -0.14
PHGDH-220ENST00000641570 ATF7IP2Q5U623 682 aa14.19□□□□□ -0.14
PHGDH-220ENST00000641570 TWF2Q6IBS0 349 aaKnown RBP14.19□□□□□ -0.14
PHGDH-220ENST00000641570 LRSAM1Q6UWE0 723 aa14.19□□□□□ -0.14
PHGDH-220ENST00000641570 RPUSD2Q8IZ73 545 aaKnown RBP14.19□□□□□ -0.14
PHGDH-220ENST00000641570 KIAA0895Q8NCT3 520 aa14.19□□□□□ -0.14
PHGDH-220ENST00000641570 POMGNT1Q8WZA1 660 aa14.19□□□□□ -0.14
PHGDH-220ENST00000641570 APBB2Q92870 758 aa14.19□□□□□ -0.14
PHGDH-220ENST00000641570 CCDC51Q96ER9 411 aa14.19□□□□□ -0.14
PHGDH-220ENST00000641570 FTHL17Q9BXU8 183 aa14.19□□□□□ -0.14
PHGDH-220ENST00000641570 TYW1Q9NV66 732 aaKnown RBP14.19□□□□□ -0.14
PHGDH-220ENST00000641570 FRMD4BQ9Y2L6 1034 aa14.19□□□□□ -0.14
PHGDH-220ENST00000641570 SQORQ9Y6N5 450 aa14.19□□□□□ -0.14
PHGDH-220ENST00000641570 ARID2Q68CP9 1835 aa14.19□□□□□ -0.14
PHGDH-220ENST00000641570 KIAA0391O15091 583 aaKnown RBP14.18□□□□□ -0.14
PHGDH-220ENST00000641570 CLDN3O15551 220 aa14.18□□□□□ -0.14
PHGDH-220ENST00000641570 ACTN1P12814 892 aa14.18□□□□□ -0.14
PHGDH-220ENST00000641570 IBSPP21815 317 aaPredicted RBP14.18□□□□□ -0.14
PHGDH-220ENST00000641570 PRCPP42785 496 aa14.18□□□□□ -0.14
PHGDH-220ENST00000641570 RBL2Q08999 1139 aa14.18□□□□□ -0.14
PHGDH-220ENST00000641570 KYAT1Q16773 422 aa14.18□□□□□ -0.14
PHGDH-220ENST00000641570 DPCR1Q3MIW9 517 aa14.18□□□□□ -0.14
PHGDH-220ENST00000641570 DCAF4L1Q3SXM0 396 aa14.18□□□□□ -0.14
PHGDH-220ENST00000641570 COBLL1Q53SF7 1204 aa14.18□□□□□ -0.14
PHGDH-220ENST00000641570 FAM26DQ5JW98 314 aa14.18□□□□□ -0.14
PHGDH-220ENST00000641570 ZPBP2Q6X784 338 aa14.18□□□□□ -0.14
PHGDH-220ENST00000641570 FAM43BQ6ZT52 329 aaPredicted RBP14.18□□□□□ -0.14
PHGDH-220ENST00000641570 USP37Q86T82 979 aa14.18□□□□□ -0.14
PHGDH-220ENST00000641570 IFNLR1Q8IU57 520 aaPredicted RBP14.18□□□□□ -0.14
PHGDH-220ENST00000641570 FAM114A1Q8IWE2 563 aa14.18□□□□□ -0.14
PHGDH-220ENST00000641570 ADSSL1Q8N142 457 aa14.18□□□□□ -0.14
PHGDH-220ENST00000641570 SCFD1Q8WVM8 642 aa14.18□□□□□ -0.14
PHGDH-220ENST00000641570 DHX38Q92620 1227 aaKnown RBP14.18□□□□□ -0.14
PHGDH-220ENST00000641570 P2RX5Q93086 422 aa14.18□□□□□ -0.14
PHGDH-220ENST00000641570 IFIH1Q9BYX4 1025 aaKnown RBP14.18□□□□□ -0.14
PHGDH-220ENST00000641570 DNAJC25Q9H1X3 360 aa14.18□□□□□ -0.14
PHGDH-220ENST00000641570 IFT122Q9HBG6 1241 aa14.18□□□□□ -0.14
PHGDH-220ENST00000641570 CNTNAP2Q9UHC6 1331 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 PDXKO00764 312 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 CETN3O15182 167 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 CSDE1O75534 798 aaKnown RBP14.17□□□□□ -0.14
PHGDH-220ENST00000641570 TOM1L1O75674 476 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 LDHAP00338 332 aaKnown RBP14.17□□□□□ -0.14
PHGDH-220ENST00000641570 TIMP1P01033 207 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 CHRNA1P02708 482 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 PFKMP08237 780 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 SKIP12755 728 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 CCNE1P24864 410 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 ERCC5P28715 1186 aaPredicted RBP14.17□□□□□ -0.14
PHGDH-220ENST00000641570 CD52P31358 61 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 CYP2C18P33260 490 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 CASP5P51878 434 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 EHHADHQ08426 723 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 MGAT3Q09327 533 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 PPIGQ13427 754 aaKnown RBP eCLIP14.17□□□□□ -0.146e-8■□□□□ 10.1
PHGDH-220ENST00000641570 NOLC1Q14978 699 aaKnown RBP eCLIP14.17□□□□□ -0.14
PHGDH-220ENST00000641570 FAM187BQ17R55 369 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 BMT2Q1RMZ1 405 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 TRIM71Q2Q1W2 868 aaKnown RBP14.17□□□□□ -0.14
PHGDH-220ENST00000641570 FBXO47Q5MNV8 452 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 DEFB128Q7Z7B8 93 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 CREBRFQ8IUR6 639 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 ZNF507Q8TCN5 953 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 WNT8BQ93098 351 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 MSTO1Q9BUK6 570 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 CHST12Q9NRB3 414 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 RWDD2AQ9UIY3 292 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 TBX21Q9UL17 535 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 ST3GAL5Q9UNP4 418 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 NOC2LQ9Y3T9 749 aaKnown RBP14.17□□□□□ -0.14
PHGDH-220ENST00000641570 CENPFP49454 3210 aa14.17□□□□□ -0.14
PHGDH-220ENST00000641570 ADGRA3Q8IWK6 1321 aa14.16□□□□□ -0.14
PHGDH-220ENST00000641570 KIAA0355O15063 1070 aa14.16□□□□□ -0.14
PHGDH-220ENST00000641570 TSPAN1O60635 241 aa14.16□□□□□ -0.14
PHGDH-220ENST00000641570 EXOC3O60645 756 aa14.16□□□□□ -0.14
PHGDH-220ENST00000641570 IQCF3P0C7M6 154 aa14.16□□□□□ -0.14
PHGDH-220ENST00000641570 EPB41P11171 864 aaKnown RBP14.16□□□□□ -0.14
PHGDH-220ENST00000641570 FGFR4P22455 802 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms