RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 ADCY7P51828 1080 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 ZBED6P86452 979 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 NONOQ15233 471 aaKnown RBP eCLIP12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 ZYXQ15942 572 aaKnown RBP12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 TBC1D10BQ4KMP7 808 aaPredicted RBP12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 TMCO4Q5TGY1 634 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 MICALL2Q8IY33 904 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 IQCKQ8N0W5 287 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 DCAF4Q8WV16 495 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 USP17L15C9J2P7 530 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 USP17L13C9JLJ4 530 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 USP17L11C9JVI0 530 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 USP17L18D6R9N7 530 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 USP17L22D6RA61 530 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 USP17L17D6RBQ6 530 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 USP17L19D6RCP7 530 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 USP17L20D6RJB6 530 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 GNA11P29992 359 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 ALDH3A1P30838 453 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 ZNF280AP59817 542 aaPredicted RBP12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 POLR2FP61218 127 aaKnown RBP12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 USP17L24Q0WX57 530 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 TNIP1Q15025 636 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 P3H1Q32P28 736 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 SLC9C1Q4G0N8 1177 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 USP17L6PQ6QN14 398 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 PEX26Q7Z412 305 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 SH3RF1Q7Z6J0 888 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 CCNJLQ8IV13 435 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 FZD1Q9UP38 647 aa12.75□□□□□ -0.37
RBFOX1-224ENST00000641259 LGALS16A8MUM7 142 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 FOXO6A8MYZ6 492 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 FZD9O00144 591 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 RNF8O76064 485 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 BMP15O95972 392 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 FGFR4P22455 802 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 IFI35P80217 286 aaPredicted RBP12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 RASA3Q14644 834 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 NT5DC1Q5TFE4 455 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 PDXDC2PQ6P474 469 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 VPS52Q8N1B4 723 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 CCT6BQ92526 530 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 GMCL1Q96IK5 515 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 H7C1D1 291 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 SART1O43290 800 aaKnown RBP12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 PMS1P54277 932 aaKnown RBP12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 SLMAPQ14BN4 828 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 WDR59Q6PJI9 974 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 KRT25Q7Z3Z0 450 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 NEK8Q86SG6 692 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 SPATA20Q8TB22 786 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 LRRC8CQ8TDW0 803 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 UCMAQ8WVF2 138 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 RBM41Q96IZ5 413 aaKnown RBP12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 FMO2Q99518 471 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 RIC8AQ9NPQ8 531 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 HAO1Q9UJM8 370 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 PCNTO95613 3336 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 WDR91A4D1P6 747 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 CFAP73A6NFT4 308 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 HNRNPRO43390 633 aaKnown RBP12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 KLHL30Q0D2K2 578 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 BLMHQ13867 455 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 IFI16Q16666 785 aaKnown RBP12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 NAALADL2Q58DX5 795 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 CDCA2Q69YH5 1023 aaPredicted RBP12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 MAB21L3Q8N8X9 362 aa12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 DRAXINQ8NBI3 349 aaPredicted RBP12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 NMD3Q96D46 503 aaKnown RBP12.74□□□□□ -0.37
RBFOX1-224ENST00000641259 ERVK-9P63128 1117 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 ZNF211Q13398 564 aaPredicted RBP12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 MTMR3Q13615 1198 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 LRRC41Q15345 812 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 USH1GQ495M9 461 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 ARL6IP4Q66PJ3 421 aaKnown RBP12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 FAM83AQ86UY5 434 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 ELOA2Q8IYF1 753 aaPredicted RBP12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 ERLEC1Q96DZ1 483 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 UBE2OQ9C0C9 1292 aaKnown RBP12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 VCX3BQ9H321 246 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 PREBQ9HCU5 417 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 VCX3AQ9NNX9 186 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 SYT15Q9BQS2 421 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 SH2D4AQ9H788 454 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 LTBP3Q9NS15 1303 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 ENTPD5O75356 428 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 FLOT1O75955 427 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 OATP04181 439 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 CAP2P40123 477 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 ABL2P42684 1182 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 TNNI2P48788 182 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 BIRC3Q13489 604 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 FAM83BQ5T0W9 1011 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 FKBP1CQ5VVH2 108 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 PRAMEF18Q5VWM3 479 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 HS2ST1Q7LGA3 356 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 LCA5Q86VQ0 697 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 ERP27Q96DN0 273 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms