RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 IQCEQ6IPM2 695 aa18.8■□□□□ 0.6
PHGDH-208ENST00000641023 SLC39A4Q6P5W5 647 aa18.8■□□□□ 0.6
PHGDH-208ENST00000641023 TAS1R3Q7RTX0 852 aa18.8■□□□□ 0.6
PHGDH-208ENST00000641023 IRF2BP2Q7Z5L9 587 aa18.8■□□□□ 0.6
PHGDH-208ENST00000641023 CBWD2Q8IUF1 395 aa18.8■□□□□ 0.6
PHGDH-208ENST00000641023 GPD1LQ8N335 351 aa18.8■□□□□ 0.6
PHGDH-208ENST00000641023 ZSWIM2Q8NEG5 633 aa18.8■□□□□ 0.6
PHGDH-208ENST00000641023 COPS5Q92905 334 aa18.8■□□□□ 0.6
PHGDH-208ENST00000641023 SAAL1Q96ER3 474 aa18.8■□□□□ 0.6
PHGDH-208ENST00000641023 FBXL18Q96ME1 805 aa18.8■□□□□ 0.6
PHGDH-208ENST00000641023 NAPGQ99747 312 aaPredicted RBP18.8■□□□□ 0.6
PHGDH-208ENST00000641023 INTS2Q9H0H0 1204 aaKnown RBP18.8■□□□□ 0.6
PHGDH-208ENST00000641023 RCCD1A6NED2 376 aa18.79■□□□□ 0.6
PHGDH-208ENST00000641023 ITGBL1O95965 494 aaPredicted RBP18.79■□□□□ 0.6
PHGDH-208ENST00000641023 STAT1P42224 750 aa18.79■□□□□ 0.6
PHGDH-208ENST00000641023 JAM2P57087 298 aa18.79■□□□□ 0.6
PHGDH-208ENST00000641023 TUBB2AQ13885 445 aa18.79■□□□□ 0.6
PHGDH-208ENST00000641023 SLC18A3Q16572 532 aa18.79■□□□□ 0.6
PHGDH-208ENST00000641023 TAPT1Q6NXT6 567 aa18.79■□□□□ 0.6
PHGDH-208ENST00000641023 TRIM50Q86XT4 487 aa18.79■□□□□ 0.6
PHGDH-208ENST00000641023 TCP11Q8WWU5 503 aa18.79■□□□□ 0.6
PHGDH-208ENST00000641023 TSC1Q92574 1164 aa18.79■□□□□ 0.6
PHGDH-208ENST00000641023 JPH2Q9BR39 696 aaPredicted RBP18.79■□□□□ 0.6
PHGDH-208ENST00000641023 TUBB2BQ9BVA1 445 aa18.79■□□□□ 0.6
PHGDH-208ENST00000641023 STK33Q9BYT3 514 aa18.79■□□□□ 0.6
PHGDH-208ENST00000641023 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.79■□□□□ 0.6
PHGDH-208ENST00000641023 TFR2Q9UP52 801 aa18.79■□□□□ 0.6
PHGDH-208ENST00000641023 KIAA0391O15091 583 aaKnown RBP18.78■□□□□ 0.6
PHGDH-208ENST00000641023 PMM2O15305 246 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 PRKCIP41743 596 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 GCLMP48507 274 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 PPP3CAQ08209 521 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 GRB14Q14449 540 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 PLCB4Q15147 1175 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 IER5Q5VY09 327 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 MAMDC4Q6UXC1 1216 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 PLEKHH3Q7Z736 793 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.78■□□□□ 0.6
PHGDH-208ENST00000641023 KIAA1586Q9HCI6 787 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 DNAJC12Q9UKB3 198 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 MRFAP1Q9Y605 127 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 MCM3APO60318 1980 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 ADRB2P07550 413 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 FERP16591 822 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 MXI1P50539 228 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 HSP90AA2PQ14568 343 aaPredicted RBP18.78■□□□□ 0.6
PHGDH-208ENST00000641023 ENOX2Q16206 610 aaKnown RBP18.78■□□□□ 0.6
PHGDH-208ENST00000641023 CHADLQ6NUI6 762 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 GJB7Q6PEY0 223 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 MNS1Q8NEH6 495 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 PARD3BQ8TEW8 1205 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 SECISBP2LQ93073 1101 aaKnown RBP18.78■□□□□ 0.6
PHGDH-208ENST00000641023 TMEM134Q9H6X4 195 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 ADAMTS1Q9UHI8 967 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 TRPC6Q9Y210 931 aa18.78■□□□□ 0.6
PHGDH-208ENST00000641023 RBM47A0AV96 593 aaKnown RBP18.77■□□□□ 0.6
PHGDH-208ENST00000641023 HBP1O60381 514 aa18.77■□□□□ 0.6
PHGDH-208ENST00000641023 GH1P01241 217 aa18.77■□□□□ 0.6
PHGDH-208ENST00000641023 CCDC172P0C7W6 258 aa18.77■□□□□ 0.6
PHGDH-208ENST00000641023 ANXA13P27216 316 aa18.77■□□□□ 0.6
PHGDH-208ENST00000641023 ZNF157P51786 506 aaPredicted RBP18.77■□□□□ 0.6
PHGDH-208ENST00000641023 ENPEPQ07075 957 aa18.77■□□□□ 0.6
PHGDH-208ENST00000641023 MXD4Q14582 209 aaPredicted RBP18.77■□□□□ 0.6
PHGDH-208ENST00000641023 TMEM63BQ5T3F8 832 aa18.77■□□□□ 0.6
PHGDH-208ENST00000641023 SLFN12LQ6IEE8 588 aa18.77■□□□□ 0.6
PHGDH-208ENST00000641023 VPS36Q86VN1 386 aa18.77■□□□□ 0.6
PHGDH-208ENST00000641023 LMO3Q8TAP4 145 aa18.77■□□□□ 0.6
PHGDH-208ENST00000641023 TMC2Q8TDI7 906 aa18.77■□□□□ 0.6
PHGDH-208ENST00000641023 CCDC127Q96BQ5 260 aa18.77■□□□□ 0.6
PHGDH-208ENST00000641023 MFSD14AQ96MC6 490 aa18.77■□□□□ 0.6
PHGDH-208ENST00000641023 SUGCTQ9HAC7 445 aa18.77■□□□□ 0.6
PHGDH-208ENST00000641023 SLC5A4Q9NY91 659 aa18.77■□□□□ 0.6
PHGDH-208ENST00000641023 ERAP1Q9NZ08 941 aa18.77■□□□□ 0.6
PHGDH-208ENST00000641023 PJA2O43164 708 aa18.77■□□□□ 0.59
PHGDH-208ENST00000641023 ADCY3O60266 1144 aa18.77■□□□□ 0.59
PHGDH-208ENST00000641023 PIGRP01833 764 aa18.77■□□□□ 0.59
PHGDH-208ENST00000641023 PTK2Q05397 1052 aa18.77■□□□□ 0.59
PHGDH-208ENST00000641023 ARHGAP1Q07960 439 aa18.77■□□□□ 0.59
PHGDH-208ENST00000641023 C1orf220Q5T0J3 134 aa18.77■□□□□ 0.59
PHGDH-208ENST00000641023 KRT39Q6A163 491 aa18.77■□□□□ 0.59
PHGDH-208ENST00000641023 PLEKHO2Q8TD55 490 aa18.77■□□□□ 0.59
PHGDH-208ENST00000641023 PRPF31Q8WWY3 499 aaKnown RBP18.77■□□□□ 0.59
PHGDH-208ENST00000641023 VTI1AQ96AJ9 217 aa18.77■□□□□ 0.59
PHGDH-208ENST00000641023 STYXL1Q9Y6J8 313 aa18.77■□□□□ 0.59
PHGDH-208ENST00000641023 PLXNB2O15031 1838 aa18.76■□□□□ 0.59
PHGDH-208ENST00000641023 IGKV6-21A0A0C4DH24 114 aa18.76■□□□□ 0.59
PHGDH-208ENST00000641023 MACROD2A1Z1Q3 448 aa18.76■□□□□ 0.59
PHGDH-208ENST00000641023 ZNF233A6NK53 670 aa18.76■□□□□ 0.59
PHGDH-208ENST00000641023 EFNA5P52803 228 aa18.76■□□□□ 0.59
PHGDH-208ENST00000641023 CAPSQ13938 189 aa18.76■□□□□ 0.59
PHGDH-208ENST00000641023 C10orf76Q5T2E6 689 aa18.76■□□□□ 0.59
PHGDH-208ENST00000641023 PSPC1Q8WXF1 523 aaKnown RBP18.76■□□□□ 0.59
PHGDH-208ENST00000641023 MAML3Q96JK9 1138 aa18.76■□□□□ 0.59
PHGDH-208ENST00000641023 TMEM117Q9H0C3 514 aa18.76■□□□□ 0.59
PHGDH-208ENST00000641023 AJAP1Q9UKB5 411 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-208ENST00000641023 DUSP10Q9Y6W6 482 aa18.76■□□□□ 0.59
PHGDH-208ENST00000641023 A0A087X0T9 212 aa18.75■□□□□ 0.59
PHGDH-208ENST00000641023 MANSC4A6NHS7 340 aaPredicted RBP18.75■□□□□ 0.59
PHGDH-208ENST00000641023 F8VZ95 297 aa18.75■□□□□ 0.59
PHGDH-208ENST00000641023 TULP1O00294 542 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms