RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 HOXA11P31270 313 aaPredicted RBP10.03□□□□□ -0.8
SCARB2-225ENST00000640900 PHKA2P46019 1235 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 ATN1P54259 1190 aaPredicted RBP10.03□□□□□ -0.8
SCARB2-225ENST00000640900 CHMP4BP1P59074 171 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 SNRPFP62306 86 aaKnown RBP10.03□□□□□ -0.8
SCARB2-225ENST00000640900 STX1AQ16623 288 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 KNOP1Q1ED39 458 aaKnown RBP10.03□□□□□ -0.8
SCARB2-225ENST00000640900 KIZQ2M2Z5 673 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 ZC2HC1CQ53FD0 456 aaPredicted RBP10.03□□□□□ -0.8
SCARB2-225ENST00000640900 FBXO47Q5MNV8 452 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 ZNF618Q5T7W0 954 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 TTI2Q6NXR4 508 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 SLC39A4Q6P5W5 647 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 LRSAM1Q6UWE0 723 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 ZPBP2Q6X784 338 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 C12orf56Q8IXR9 622 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 MYOCDQ8IZQ8 938 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 DEPTORQ8TB45 409 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 DHTKD1Q96HY7 919 aaPredicted RBP10.03□□□□□ -0.8
SCARB2-225ENST00000640900 PRIMPOLQ96LW4 560 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 BPIFA3Q9BQP9 254 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 OSBPL7Q9BZF2 842 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 SEMA6BQ9H3T3 888 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 ANO10Q9NW15 660 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 DMAC2Q9NW81 257 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 TBC1D7Q9P0N9 293 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 TRAF3IP3Q9Y228 551 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 CDY2AQ9Y6F7 541 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 CNTNAP2Q9UHC6 1331 aa10.03□□□□□ -0.8
SCARB2-225ENST00000640900 TTLL13PA6NNM8 815 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 CCDC169A6NNP5 214 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 K7ENM7 598 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 K7ERI5 159 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 STK25O00506 426 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 PDXKO00764 312 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 TLR3O15455 904 aaKnown RBP10.02□□□□□ -0.81
SCARB2-225ENST00000640900 PQBP1O60828 265 aaKnown RBP10.02□□□□□ -0.81
SCARB2-225ENST00000640900 PRPF6O94906 941 aaKnown RBP10.02□□□□□ -0.81
SCARB2-225ENST00000640900 GCNT3O95395 438 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 CAVIN2O95810 425 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 CXCL10P02778 98 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 CCDC192P0DO97 292 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 SELPP16109 830 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 ADSSP30520 456 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 TIE1P35590 1138 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 THPOP40225 353 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 PMS1P54277 932 aaKnown RBP10.02□□□□□ -0.81
SCARB2-225ENST00000640900 TMEM62Q0P6H9 643 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 BFSP2Q13515 415 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 MYBPC2Q14324 1141 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 LPIN1Q14693 890 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 ISM2Q6H9L7 571 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 SASS6Q6UVJ0 657 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 TSHZ1Q6ZSZ6 1077 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 STXBP4Q6ZWJ1 553 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 FAM228AQ86W67 206 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 SLC9A9Q8IVB4 645 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 ZBTB8OSQ8IWT0 167 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 USP38Q8NB14 1042 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 NLRP4Q96MN2 994 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 ACCSQ96QU6 501 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 ACO2Q99798 780 aaKnown RBP10.02□□□□□ -0.81
SCARB2-225ENST00000640900 TRAIPQ9BWF2 469 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 GCOM2Q9BZD3 368 aaPredicted RBP10.02□□□□□ -0.81
SCARB2-225ENST00000640900 WNT8AQ9H1J5 351 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 ZHX3Q9H4I2 956 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 TMEM206Q9H813 350 aa10.02□□□□□ -0.81
SCARB2-225ENST00000640900 PRMT7Q9NVM4 692 aaPredicted RBP10.02□□□□□ -0.81
SCARB2-225ENST00000640900 CGNQ9P2M7 1197 aaKnown RBP10.02□□□□□ -0.81
SCARB2-225ENST00000640900 A0A1B0GUA9 196 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 TRIM43BA6NCK2 446 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 FAM189A1O60320 539 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 TSPAN1O60635 241 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 KIF20AO95235 890 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 PARNO95453 639 aaKnown RBP10.01□□□□□ -0.81
SCARB2-225ENST00000640900 CLTBP09497 229 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 CCNE1P24864 410 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 DSC3Q14574 896 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 NCAPHQ15003 741 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 IQCB1Q15051 598 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 MAPK6Q16659 721 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 EDRF1Q3B7T1 1238 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 C11orf57Q6ZUT1 292 aaPredicted RBP10.01□□□□□ -0.81
SCARB2-225ENST00000640900 CCDC155Q8N6L0 562 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 NLRP7Q8WX94 980 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 P2RX5Q93086 422 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 TRIM43Q96BQ3 446 aaPredicted RBP10.01□□□□□ -0.81
SCARB2-225ENST00000640900 ZNF668Q96K58 619 aaPredicted RBP10.01□□□□□ -0.81
SCARB2-225ENST00000640900 FBXL18Q96ME1 805 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 OSMRQ99650 979 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 DUSP9Q99956 384 aaKnown RBP10.01□□□□□ -0.81
SCARB2-225ENST00000640900 ANP32EQ9BTT0 268 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 INO80BQ9C086 356 aaPredicted RBP10.01□□□□□ -0.81
SCARB2-225ENST00000640900 HAPLN2Q9GZV7 340 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 HSD3B7Q9H2F3 369 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 IKZF4Q9H2S9 585 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 AGO3Q9H9G7 860 aaKnown RBP10.01□□□□□ -0.81
SCARB2-225ENST00000640900 ERVK-5Q9HDB9 667 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 AGPAT5Q9NUQ2 364 aa10.01□□□□□ -0.81
SCARB2-225ENST00000640900 TYW1Q9NV66 732 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms