RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 MGEA5O60502 916 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 EYA4O95677 639 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 GLP2RO95838 553 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 FAM86B2P0C5J1 330 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 STAT5BP51692 787 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 ZNF75DP51815 510 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 KCNB1Q14721 858 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 TMEM119Q4V9L6 283 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 PAN2Q504Q3 1202 aaKnown RBP13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 CEP55Q53EZ4 464 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 HERC4Q5GLZ8 1057 aaPredicted RBP13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 HYIQ5T013 277 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 MTHFD1LQ6UB35 978 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 HFE2Q6ZVN8 426 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 SV2BQ7L1I2 683 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 PLA2G4DQ86XP0 818 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 ERMNQ8TAM6 284 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 TMEM40Q8WWA1 233 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 LENG9Q96B70 501 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 C7orf25Q9BPX7 421 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 FTHL17Q9BXU8 183 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 GTPBP4Q9BZE4 634 aaKnown RBP13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 AZI2Q9H6S1 392 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 CDHR5Q9HBB8 845 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 MUTYHQ9UIF7 546 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 CD207Q9UJ71 328 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 PCDHGC5Q9Y5F6 944 aa13.16□□□□□ -0.3
ERGIC3-220ENST00000640748 IGLV3-22A0A075B6J6 115 aa13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 SMIM35A0A1B0GVV1 85 aa13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 GOLGA6L6A8MZA4 724 aa13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 ZBTB42B2RXF5 422 aa13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 MSH4O15457 936 aa13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 ERCC5P28715 1186 aaPredicted RBP13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 CCT6AP40227 531 aaKnown RBP13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 SETQ01105 290 aaPredicted RBP13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 PAK2Q13177 524 aa13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 NCAPHQ15003 741 aa13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 ZNF658Q5TYW1 1059 aaPredicted RBP13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 HAUS3Q68CZ6 603 aa13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 RNF135Q8IUD6 432 aa13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 KIAA0319LQ8IZA0 1049 aa13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 EFHBQ8N7U6 833 aa13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 SMRP1Q8NCR6 262 aa13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 ENOX1Q8TC92 643 aaKnown RBP13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 RAD54LQ92698 747 aa13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 GJA10Q969M2 543 aa13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 FBXL18Q96ME1 805 aa13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 ERVK-5Q9HDB9 667 aa13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 TECTAO75443 2155 aa13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 LOXHD1Q8IVV2 1947 aa13.15□□□□□ -0.3
ERGIC3-220ENST00000640748 M0QZ92 97 aa13.14□□□□□ -0.31
ERGIC3-220ENST00000640748 DHX15O43143 795 aaKnown RBP13.14□□□□□ -0.31
ERGIC3-220ENST00000640748 ATP4AP20648 1035 aa13.14□□□□□ -0.31
ERGIC3-220ENST00000640748 KLRC1P26715 233 aa13.14□□□□□ -0.31
ERGIC3-220ENST00000640748 CDC25BP30305 580 aa13.14□□□□□ -0.31
ERGIC3-220ENST00000640748 KRT76Q01546 638 aa13.14□□□□□ -0.31
ERGIC3-220ENST00000640748 COASYQ13057 564 aa13.14□□□□□ -0.31
ERGIC3-220ENST00000640748 NCAPH2Q6IBW4 605 aa13.14□□□□□ -0.31
ERGIC3-220ENST00000640748 ABHD15Q6UXT9 468 aa13.14□□□□□ -0.31
ERGIC3-220ENST00000640748 NIPA1Q7RTP0 329 aa13.14□□□□□ -0.31
ERGIC3-220ENST00000640748 ALYREFQ86V81 257 aaKnown RBP13.14□□□□□ -0.31
ERGIC3-220ENST00000640748 NME8Q8N427 588 aa13.14□□□□□ -0.31
ERGIC3-220ENST00000640748 LRRC15Q8TF66 581 aa13.14□□□□□ -0.31
ERGIC3-220ENST00000640748 POF1BQ8WVV4 589 aa13.14□□□□□ -0.31
ERGIC3-220ENST00000640748 LARP4BQ92615 738 aaKnown RBP13.14□□□□□ -0.31
ERGIC3-220ENST00000640748 BLOC1S4Q9NUP1 217 aa13.14□□□□□ -0.31
ERGIC3-220ENST00000640748 HCSTQ9UBK5 93 aa13.14□□□□□ -0.31
ERGIC3-220ENST00000640748 NOC2LQ9Y3T9 749 aaKnown RBP13.14□□□□□ -0.31
ERGIC3-220ENST00000640748 KLRC4O43908 158 aa13.13□□□□□ -0.31
ERGIC3-220ENST00000640748 TPM3P06753 285 aa13.13□□□□□ -0.31
ERGIC3-220ENST00000640748 STAG3L1P0CL83 205 aa13.13□□□□□ -0.31
ERGIC3-220ENST00000640748 NRIP1P48552 1158 aa13.13□□□□□ -0.31
ERGIC3-220ENST00000640748 NDUFV1P49821 464 aa13.13□□□□□ -0.31
ERGIC3-220ENST00000640748 SLC26A2P50443 739 aa13.13□□□□□ -0.31
ERGIC3-220ENST00000640748 ASIC1P78348 528 aa13.13□□□□□ -0.31
ERGIC3-220ENST00000640748 RBM10P98175 930 aaKnown RBP13.13□□□□□ -0.31
ERGIC3-220ENST00000640748 NHLH1Q02575 133 aa13.13□□□□□ -0.31
ERGIC3-220ENST00000640748 MCM6Q14566 821 aa13.13□□□□□ -0.31
ERGIC3-220ENST00000640748 KMT5BQ4FZB7 885 aa13.13□□□□□ -0.31
ERGIC3-220ENST00000640748 CCDC60Q8IWA6 550 aaPredicted RBP13.13□□□□□ -0.31
ERGIC3-220ENST00000640748 VN1R2Q8NFZ6 395 aa13.13□□□□□ -0.31
ERGIC3-220ENST00000640748 ATP8B4Q8TF62 1192 aa13.13□□□□□ -0.31
ERGIC3-220ENST00000640748 SLC5A5Q92911 643 aa13.13□□□□□ -0.31
ERGIC3-220ENST00000640748 MRFAP1L1Q96HT8 127 aa13.13□□□□□ -0.31
ERGIC3-220ENST00000640748 POP1Q99575 1024 aaKnown RBP13.13□□□□□ -0.31
ERGIC3-220ENST00000640748 TRIM9Q9C026 710 aa13.13□□□□□ -0.31
ERGIC3-220ENST00000640748 BARX2Q9UMQ3 279 aaPredicted RBP13.13□□□□□ -0.31
ERGIC3-220ENST00000640748 LOC730098B7Z3J9 87 aa13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 PPP1R3GB7ZBB8 358 aa13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 C9IYK1 514 aa13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 DDX39AO00148 427 aaKnown RBP13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 HBP1O60381 514 aa13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 RHOBTB3O94955 611 aa13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 PPP1R2P41236 205 aa13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 SPIRE1Q08AE8 756 aa13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 NFX1Q12986 1120 aaKnown RBP13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 STIM1Q13586 685 aa13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 DHX8Q14562 1220 aaKnown RBP13.12□□□□□ -0.31
ERGIC3-220ENST00000640748 FAM102BQ5T8I3 360 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms