RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-231	ENST00000640501	POLD4	Q9HCU8	107 aa		9.02	□□□□□ -0.97
PNKP-231	ENST00000640501	SLC5A4	Q9NY91	659 aa		9.02	□□□□□ -0.97
PNKP-231	ENST00000640501	BTBD7	Q9P203	1132 aa		9.02	□□□□□ -0.97
PNKP-231	ENST00000640501	CLEC11A	Q9Y240	323 aa		9.02	□□□□□ -0.97
PNKP-231	ENST00000640501	USP20	Q9Y2K6	914 aa		9.02	□□□□□ -0.97
PNKP-231	ENST00000640501	IVNS1ABP	Q9Y6Y0	642 aa		9.02	□□□□□ -0.97
PNKP-231	ENST00000640501	EMSY	Q7Z589	1322 aa		9.02	□□□□□ -0.97
PNKP-231	ENST00000640501	SYNGAP1	Q96PV0	1343 aa		9.02	□□□□□ -0.97
PNKP-231	ENST00000640501		A0A087X0T9	212 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	IGKV6D-21	A0A0A0MT36	114 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	GRID2IP	A4D2P6	1211 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	ZNF263	O14978	683 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	NKRF	O15226	690 aa	Known RBP eCLIP	9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	STRN	O43815	780 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	EXTL3	O43909	919 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	ZNF862	O60290	1169 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	EVI5	O60447	810 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	TLR2	O60603	784 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	FARP2	O94887	1054 aa	Predicted RBP	9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	MOCS3	O95396	460 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	GGPS1	O95749	300 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	ATP1A1	P05023	1023 aa	Known RBP	9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	FAM228B	P0C875	321 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	POTEJ	P0CG39	1038 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	TRIM49	P0CI25	452 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	TRIM49C	P0CI26	452 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	ACTN1	P12814	892 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	MATR3	P43243	847 aa	Known RBP eCLIP	9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	NOP2	P46087	812 aa	Known RBP	9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	BPIFB4	P59827	614 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	CNTN2	Q02246	1040 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	DRAP1	Q14919	205 aa	Predicted RBP	9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	ENOX2	Q16206	610 aa	Known RBP	9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	GLE1	Q53GS7	698 aa	Known RBP	9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	WDR44	Q5JSH3	913 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	WDR78	Q5VTH9	848 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	IER5	Q5VY09	327 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	PLPPR4	Q7Z2D5	763 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	TRMT1L	Q7Z2T5	733 aa	Known RBP	9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	KSR1	Q8IVT5	923 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	DHX37	Q8IY37	1157 aa	Known RBP	9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	ABRA	Q8N0Z2	381 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	KRT222	Q8N1A0	295 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	MSANTD4	Q8NCY6	345 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	FBXL13	Q8NEE6	735 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	GPRC5A	Q8NFJ5	357 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	SCFD2	Q8WU76	684 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	GLG1	Q92896	1179 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	NT5C1B	Q96P26	610 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	CBWD1	Q9BRT8	395 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	IMPG2	Q9BZV3	1241 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	SMARCAD1	Q9H4L7	1026 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	TAF1D	Q9H5J8	278 aa	Predicted RBP	9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	DHX33	Q9H6R0	707 aa	Known RBP	9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	TMEM134	Q9H6X4	195 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	SIX2	Q9NPC8	291 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	GPRC5C	Q9NQ84	441 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	PDLIM7	Q9NR12	457 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	ARHGAP28	Q9P2N2	729 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	TRIM10	Q9UDY6	481 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	NAGPA	Q9UK23	515 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	DIS3	Q9Y2L1	958 aa	Known RBP	9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	PCDHGC5	Q9Y5F6	944 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	LCT	P09848	1927 aa		9.01	□□□□□ -0.97
PNKP-231	ENST00000640501	LRRC37A2	A6NM11	1700 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	SOWAHB	A6NEL2	793 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	LRRIQ4	A6NIV6	560 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	ENC1	O14682	589 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	FANCG	O15287	622 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	ASAP2	O43150	1006 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	MAF	O75444	373 aa	Predicted RBP	9	□□□□□ -0.97
PNKP-231	ENST00000640501	PIGR	P01833	764 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	TCF7	P36402	384 aa	Predicted RBP	9	□□□□□ -0.97
PNKP-231	ENST00000640501	GCLM	P48507	274 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	ERVK-9	P63128	1117 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	KIF22	Q14807	665 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	CBWD6	Q4V339	395 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	EPC2	Q52LR7	807 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	CBWD3	Q5JTY5	395 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	CBWD5	Q5RIA9	395 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	LDLRAD1	Q5T700	205 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	WDR93	Q6P2C0	686 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	ZPBP2	Q6X784	338 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	ZNF572	Q7Z3I7	529 aa	Predicted RBP	9	□□□□□ -0.97
PNKP-231	ENST00000640501	ZNF571	Q7Z3V5	609 aa	Predicted RBP	9	□□□□□ -0.97
PNKP-231	ENST00000640501	RHOT2	Q8IXI1	618 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	MORC4	Q8TE76	937 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	PSPC1	Q8WXF1	523 aa	Known RBP	9	□□□□□ -0.97
PNKP-231	ENST00000640501	DHX38	Q92620	1227 aa	Known RBP	9	□□□□□ -0.97
PNKP-231	ENST00000640501	PBK	Q96KB5	322 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	MFSD14A	Q96MC6	490 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	FBXL18	Q96ME1	805 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	OSBPL9	Q96SU4	736 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	NAP1L3	Q99457	506 aa	Predicted RBP	9	□□□□□ -0.97
PNKP-231	ENST00000640501	VTA1	Q9NP79	307 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	UBE2T	Q9NPD8	197 aa	Predicted RBP	9	□□□□□ -0.97
PNKP-231	ENST00000640501	C1orf112	Q9NSG2	853 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	DDX41	Q9UJV9	622 aa	Known RBP	9	□□□□□ -0.97
PNKP-231	ENST00000640501	COQ4	Q9Y3A0	265 aa		9	□□□□□ -0.97
PNKP-231	ENST00000640501	SI	P14410	1827 aa		8.99	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms