RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 LMBR1LQ6UX01 489 aa6.85□□□□□ -1.31
CCDC7-216ENST00000640058 MSL3Q8N5Y2 521 aaKnown RBP6.85□□□□□ -1.31
CCDC7-216ENST00000640058 PPP1R14CQ8TAE6 165 aa6.85□□□□□ -1.31
CCDC7-216ENST00000640058 ATXN2LQ8WWM7 1075 aaKnown RBP6.85□□□□□ -1.31
CCDC7-216ENST00000640058 MRIQ9BWK5 157 aa6.85□□□□□ -1.31
CCDC7-216ENST00000640058 PCED1AQ9H1Q7 454 aa6.85□□□□□ -1.31
CCDC7-216ENST00000640058 EPC1Q9H2F5 836 aa6.85□□□□□ -1.31
CCDC7-216ENST00000640058 AURKAIP1Q9NWT8 199 aaPredicted RBP6.85□□□□□ -1.31
CCDC7-216ENST00000640058 TMA7Q9Y2S6 64 aaKnown RBP6.85□□□□□ -1.31
CCDC7-216ENST00000640058 MTSS1O43312 755 aa6.84□□□□□ -1.31
CCDC7-216ENST00000640058 BPIP17213 487 aa6.84□□□□□ -1.31
CCDC7-216ENST00000640058 HMGA2P52926 109 aa6.84□□□□□ -1.31
CCDC7-216ENST00000640058 ABHD18Q0P651 414 aa6.84□□□□□ -1.31
CCDC7-216ENST00000640058 TUBA3CQ13748 450 aa6.84□□□□□ -1.31
CCDC7-216ENST00000640058 TUBA3EQ6PEY2 450 aa6.84□□□□□ -1.31
CCDC7-216ENST00000640058 DDX46Q7L014 1031 aaKnown RBP6.84□□□□□ -1.31
CCDC7-216ENST00000640058 STRA8Q7Z7C7 330 aa6.84□□□□□ -1.31
CCDC7-216ENST00000640058 OR5M3Q8NGP4 307 aa6.84□□□□□ -1.31
CCDC7-216ENST00000640058 SLKQ9H2G2 1235 aaPredicted RBP6.84□□□□□ -1.31
CCDC7-216ENST00000640058 IFT22Q9H7X7 185 aa6.84□□□□□ -1.31
CCDC7-216ENST00000640058 PARPBPQ9NWS1 579 aa6.84□□□□□ -1.31
CCDC7-216ENST00000640058 EVLQ9UI08 416 aaPredicted RBP6.84□□□□□ -1.31
CCDC7-216ENST00000640058 TMPRSS11EQ9UL52 423 aa6.84□□□□□ -1.31
CCDC7-216ENST00000640058 EDARQ9UNE0 448 aa6.84□□□□□ -1.31
CCDC7-216ENST00000640058 REXO2Q9Y3B8 237 aaKnown RBP6.84□□□□□ -1.31
CCDC7-216ENST00000640058 NRP2O60462 931 aa6.83□□□□□ -1.32
CCDC7-216ENST00000640058 FAM20BO75063 409 aa6.83□□□□□ -1.32
CCDC7-216ENST00000640058 MFAP3LO75121 409 aa6.83□□□□□ -1.32
CCDC7-216ENST00000640058 GNAT2P19087 354 aa6.83□□□□□ -1.32
CCDC7-216ENST00000640058 HK1P19367 917 aa6.83□□□□□ -1.32
CCDC7-216ENST00000640058 NRG3P56975 720 aa6.83□□□□□ -1.32
CCDC7-216ENST00000640058 FHL2Q14192 279 aa6.83□□□□□ -1.32
CCDC7-216ENST00000640058 PDCD1Q15116 288 aa6.83□□□□□ -1.32
CCDC7-216ENST00000640058 DHCR24Q15392 516 aa6.83□□□□□ -1.32
CCDC7-216ENST00000640058 PITRM1Q5JRX3 1037 aa6.83□□□□□ -1.32
CCDC7-216ENST00000640058 SDE2Q6IQ49 451 aa6.83□□□□□ -1.32
CCDC7-216ENST00000640058 MFSD5Q6N075 450 aa6.83□□□□□ -1.32
CCDC7-216ENST00000640058 LYSMD2Q8IV50 215 aa6.83□□□□□ -1.32
CCDC7-216ENST00000640058 TTC1Q99614 292 aa6.83□□□□□ -1.32
CCDC7-216ENST00000640058 SLC2A4RGQ9NR83 387 aa6.83□□□□□ -1.32
CCDC7-216ENST00000640058 TOPORSQ9NS56 1045 aaPredicted RBP6.83□□□□□ -1.32
CCDC7-216ENST00000640058 PRSS50Q9UI38 385 aa6.83□□□□□ -1.32
CCDC7-216ENST00000640058 KCNG1Q9UIX4 513 aa6.83□□□□□ -1.32
CCDC7-216ENST00000640058 NUMBLQ9Y6R0 609 aa6.83□□□□□ -1.32
CCDC7-216ENST00000640058 PRAMEF4O60810 478 aa6.82□□□□□ -1.32
CCDC7-216ENST00000640058 RPS6KA4O75676 772 aa6.82□□□□□ -1.32
CCDC7-216ENST00000640058 IPO13O94829 963 aaKnown RBP6.82□□□□□ -1.32
CCDC7-216ENST00000640058 GPR15P49685 360 aa6.82□□□□□ -1.32
CCDC7-216ENST00000640058 RABGGTBP53611 331 aa6.82□□□□□ -1.32
CCDC7-216ENST00000640058 FNDC7Q5VTL7 733 aa6.82□□□□□ -1.32
CCDC7-216ENST00000640058 RASSF3Q86WH2 238 aa6.82□□□□□ -1.32
CCDC7-216ENST00000640058 CLRN3Q8NCR9 226 aa6.82□□□□□ -1.32
CCDC7-216ENST00000640058 KCTD10Q9H3F6 313 aa6.82□□□□□ -1.32
CCDC7-216ENST00000640058 MMRN2Q9H8L6 949 aa6.82□□□□□ -1.32
CCDC7-216ENST00000640058 A0A1W2PR48 441 aa6.81□□□□□ -1.32
CCDC7-216ENST00000640058 KLRG2A4D1S0 409 aaPredicted RBP6.81□□□□□ -1.32
CCDC7-216ENST00000640058 NRP1O14786 923 aa6.81□□□□□ -1.32
CCDC7-216ENST00000640058 MCM7P33993 719 aa6.81□□□□□ -1.32
CCDC7-216ENST00000640058 LGALS4P56470 323 aa6.81□□□□□ -1.32
CCDC7-216ENST00000640058 SLC25A3Q00325 362 aa6.81□□□□□ -1.32
CCDC7-216ENST00000640058 DUSP2Q05923 314 aa6.81□□□□□ -1.32
CCDC7-216ENST00000640058 C1QL3Q5VWW1 255 aa6.81□□□□□ -1.32
CCDC7-216ENST00000640058 TAS1R1Q7RTX1 841 aa6.81□□□□□ -1.32
CCDC7-216ENST00000640058 GLB1L2Q8IW92 636 aa6.81□□□□□ -1.32
CCDC7-216ENST00000640058 MDGA1Q8NFP4 955 aa6.81□□□□□ -1.32
CCDC7-216ENST00000640058 ZNF483Q8TF39 744 aaPredicted RBP6.81□□□□□ -1.32
CCDC7-216ENST00000640058 NEU4Q8WWR8 484 aaPredicted RBP6.81□□□□□ -1.32
CCDC7-216ENST00000640058 ST8SIA2Q92186 375 aa6.81□□□□□ -1.32
CCDC7-216ENST00000640058 EAF2Q96CJ1 260 aaPredicted RBP6.81□□□□□ -1.32
CCDC7-216ENST00000640058 MNTQ99583 582 aa6.81□□□□□ -1.32
CCDC7-216ENST00000640058 ZNF703Q9H7S9 590 aaPredicted RBP6.81□□□□□ -1.32
CCDC7-216ENST00000640058 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.8□□□□□ -1.32
CCDC7-216ENST00000640058 HSD3B2P26439 372 aa6.8□□□□□ -1.32
CCDC7-216ENST00000640058 SOX5P35711 763 aa6.8□□□□□ -1.32
CCDC7-216ENST00000640058 UBE3CQ15386 1083 aa6.8□□□□□ -1.32
CCDC7-216ENST00000640058 CCDC178Q5BJE1 867 aa6.8□□□□□ -1.32
CCDC7-216ENST00000640058 CT47A1Q5JQC4 288 aaPredicted RBP6.8□□□□□ -1.32
CCDC7-216ENST00000640058 ZNF662Q6ZS27 426 aa6.8□□□□□ -1.32
CCDC7-216ENST00000640058 SLC41A1Q8IVJ1 513 aa6.8□□□□□ -1.32
CCDC7-216ENST00000640058 OR14C36Q8NHC7 312 aa6.8□□□□□ -1.32
CCDC7-216ENST00000640058 CPPED1Q9BRF8 314 aaPredicted RBP6.8□□□□□ -1.32
CCDC7-216ENST00000640058 ENKD1Q9H0I2 346 aa6.8□□□□□ -1.32
CCDC7-216ENST00000640058 CAAP1Q9H8G2 361 aa6.8□□□□□ -1.32
CCDC7-216ENST00000640058 APOBEC2Q9Y235 224 aaKnown RBP6.8□□□□□ -1.32
CCDC7-216ENST00000640058 CDY2AQ9Y6F7 541 aa6.8□□□□□ -1.32
CCDC7-216ENST00000640058 GOLGA6L6A8MZA4 724 aa6.79□□□□□ -1.32
CCDC7-216ENST00000640058 HOXA3O43365 443 aaPredicted RBP6.79□□□□□ -1.32
CCDC7-216ENST00000640058 ULK1O75385 1050 aa6.79□□□□□ -1.32
CCDC7-216ENST00000640058 CANXP27824 592 aaKnown RBP6.79□□□□□ -1.32
CCDC7-216ENST00000640058 TOB2Q14106 344 aaPredicted RBP6.79□□□□□ -1.32
CCDC7-216ENST00000640058 UGT8Q16880 541 aa6.79□□□□□ -1.32
CCDC7-216ENST00000640058 APBB1IPQ7Z5R6 666 aaPredicted RBP6.79□□□□□ -1.32
CCDC7-216ENST00000640058 CHAC2Q8WUX2 184 aa6.79□□□□□ -1.32
CCDC7-216ENST00000640058 CLIP3Q96DZ5 547 aa6.79□□□□□ -1.32
CCDC7-216ENST00000640058 IL17RAQ96F46 866 aa6.79□□□□□ -1.32
CCDC7-216ENST00000640058 WNT8AQ9H1J5 351 aa6.79□□□□□ -1.32
CCDC7-216ENST00000640058 XDHP47989 1333 aa6.78□□□□□ -1.32
CCDC7-216ENST00000640058 ZEB2O60315 1214 aa6.78□□□□□ -1.32
CCDC7-216ENST00000640058 TMEM127O75204 238 aa6.78□□□□□ -1.32
CCDC7-216ENST00000640058 ADH4P08319 380 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms