RNA–Protein interactions for RNA: ENST00000639955.1

NECAP1-221, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NECAP1, Length 3,479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-221ENST00000639955 SIX2Q9NPC8 291 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 SWAP70Q9UH65 585 aa8.31□□□□□ -1.08
NECAP1-221ENST00000639955 G3BP2Q9UN86 482 aaKnown RBP8.31□□□□□ -1.08
NECAP1-221ENST00000639955 TNRC6CQ9HCJ0 1690 aaKnown RBP8.31□□□□□ -1.08
NECAP1-221ENST00000639955 HMGB1P1B2RPK0 211 aaPredicted RBP8.3□□□□□ -1.08
NECAP1-221ENST00000639955 PI4K2BG5E9Z4 385 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 IPO5O00410 1097 aaKnown RBP8.3□□□□□ -1.08
NECAP1-221ENST00000639955 NFIBO00712 420 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 PDXKO00764 312 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 LCA5LO95447 670 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 CLK2P49760 499 aaKnown RBP8.3□□□□□ -1.08
NECAP1-221ENST00000639955 RC3H1Q5TC82 1133 aaKnown RBP8.3□□□□□ -1.08
NECAP1-221ENST00000639955 SEL1L2Q5TEA6 688 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 KDM7AQ6ZMT4 941 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 RUFY4Q6ZNE9 571 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 CYFIP1Q7L576 1253 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 FRMD5Q7Z6J6 570 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 SIAH1Q8IUQ4 282 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 ARFGAP2Q8N6H7 521 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 LENG9Q96B70 501 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 RAVER2Q9HCJ3 691 aaKnown RBP8.3□□□□□ -1.08
NECAP1-221ENST00000639955 DDX20Q9UHI6 824 aaKnown RBP8.3□□□□□ -1.08
NECAP1-221ENST00000639955 CCPG1Q9ULG6 757 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 KIAA1551Q9HCM1 1747 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 NAV1Q8NEY1 1877 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 SNHG28P0DPA3 235 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 SPIRE1Q08AE8 756 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 CCDC137Q6PK04 289 aaKnown RBP8.3□□□□□ -1.08
NECAP1-221ENST00000639955 TMC3Q7Z5M5 1100 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 CPA5Q8WXQ8 436 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 RFFLQ8WZ73 363 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 PBKQ96KB5 322 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 C9orf72Q96LT7 481 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 INTS9Q9NV88 658 aaKnown RBP8.3□□□□□ -1.08
NECAP1-221ENST00000639955 CENPFP49454 3210 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 GOLGA8SH3BPF8 625 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 GOLGA8MH3BSY2 632 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 POLRMTO00411 1230 aaKnown RBP8.3□□□□□ -1.08
NECAP1-221ENST00000639955 SHOX2O60902 331 aaPredicted RBP8.3□□□□□ -1.08
NECAP1-221ENST00000639955 EYA4O95677 639 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 CYP3A4P08684 503 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 MXI1P50539 228 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 PMS2P54278 862 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 EDRF1Q3B7T1 1238 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 GLE1Q53GS7 698 aaKnown RBP8.3□□□□□ -1.08
NECAP1-221ENST00000639955 DDX60LQ5H9U9 1706 aaKnown RBP8.3□□□□□ -1.08
NECAP1-221ENST00000639955 GKAP1Q5VSY0 366 aaPredicted RBP8.3□□□□□ -1.08
NECAP1-221ENST00000639955 GSTA5Q7RTV2 222 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 LRRC57Q8N9N7 239 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 NEK9Q8TD19 979 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 IQCDQ96DY2 449 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 SEC16BQ96JE7 1060 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 METTL14Q9HCE5 456 aaKnown RBP8.3□□□□□ -1.08
NECAP1-221ENST00000639955 APEX2Q9UBZ4 518 aa8.3□□□□□ -1.08
NECAP1-221ENST00000639955 ATF5Q9Y2D1 282 aaPredicted RBP8.3□□□□□ -1.08
NECAP1-221ENST00000639955 NHSL1Q5SYE7 1610 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 MYH11P35749 1972 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 PEX10O60683 326 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 RPS6KA5O75582 802 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 IFNB1P01574 187 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 PYGMP11217 842 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 ECHS1P30084 290 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 SPOPLQ6IQ16 392 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 TMEM179Q6ZVK1 233 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 SYCE1Q8N0S2 351 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 NUP85Q9BW27 656 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 hCG_1984214I3L0E3 225 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 O00370 1275 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 ATF7P17544 494 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-221ENST00000639955 LMNB1P20700 586 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 PAX7P23759 505 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 RPL21P46778 160 aaKnown RBP8.29□□□□□ -1.08
NECAP1-221ENST00000639955 PLCB3Q01970 1234 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 PPATQ06203 517 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 CETN1Q12798 172 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 BFSP1Q12934 665 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 CALCOCO2Q13137 446 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 ZNF662Q6ZS27 426 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 LRRC34Q8IZ02 419 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 ZNF713Q8N859 430 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-221ENST00000639955 CCDC17Q96LX7 622 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 AGPAT1Q99943 283 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 C10orf88Q9H8K7 445 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 PICK1Q9NRD5 415 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 ANKFY1Q9P2R3 1169 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 ANAPC7Q9UJX3 599 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 VAV3Q9UKW4 847 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 AFF2P51816 1311 aa8.29□□□□□ -1.08
NECAP1-221ENST00000639955 WDR91A4D1P6 747 aa8.28□□□□□ -1.08
NECAP1-221ENST00000639955 POC1B-GALNT4F8VUJ3 575 aa8.28□□□□□ -1.08
NECAP1-221ENST00000639955 SPAG7O75391 227 aa8.28□□□□□ -1.08
NECAP1-221ENST00000639955 FAM107AO95990 144 aa8.28□□□□□ -1.08
NECAP1-221ENST00000639955 APBA3O96018 575 aa8.28□□□□□ -1.08
NECAP1-221ENST00000639955 CD58P19256 250 aa8.28□□□□□ -1.08
NECAP1-221ENST00000639955 HSPA9P38646 679 aaKnown RBP8.28□□□□□ -1.08
NECAP1-221ENST00000639955 PRELPP51888 382 aa8.28□□□□□ -1.08
NECAP1-221ENST00000639955 DYNLT1P63172 113 aa8.28□□□□□ -1.08
NECAP1-221ENST00000639955 CUL1Q13616 776 aa8.28□□□□□ -1.08
NECAP1-221ENST00000639955 VPS72Q15906 364 aa8.28□□□□□ -1.08
NECAP1-221ENST00000639955 KYNUQ16719 465 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms