RNA–Protein interactions for RNA: ENST00000638139.1

SMARCA2-265, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 2,675 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-265ENST00000638139 SGSM3Q96HU1 749 aa10.86□□□□□ -0.67
SMARCA2-265ENST00000638139 WRAP73Q9P2S5 460 aaPredicted RBP10.86□□□□□ -0.67
SMARCA2-265ENST00000638139 BCS1LQ9Y276 419 aa10.86□□□□□ -0.67
SMARCA2-265ENST00000638139 PCDHA3Q9Y5H8 950 aa10.86□□□□□ -0.67
SMARCA2-265ENST00000638139 LOC102724159A0A0B4J2E5 919 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 MIF4GDA9UHW6 222 aaKnown RBP10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 PIK3CDO00329 1044 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 RGS16O15492 202 aaPredicted RBP10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 EXOC3O60645 756 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 TRIM37O94972 964 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 BMP3P12645 472 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 CTNNA2P26232 953 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 RDXP35241 583 aaKnown RBP10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 PPP2R5CQ13362 524 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 XRCC4Q13426 336 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 PWP2Q15269 919 aaKnown RBP10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 SNCBQ16143 134 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 ODR4Q5SWX8 454 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 STXBP4Q6ZWJ1 553 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 UBL4BQ8N7F7 174 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 ZDHHC15Q96MV8 337 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 ZSWIM1Q9BR11 485 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 UBE2TQ9NPD8 197 aaPredicted RBP10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 PCYOX1Q9UHG3 505 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 NRXN2Q9P2S2 1712 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 CCT8L1PA6NM43 557 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 POLRMTO00411 1230 aaKnown RBP10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 PPIP5K2O43314 1243 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 DNAJC8O75937 253 aaPredicted RBP10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 ALAS1P13196 640 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 HSPA6P17066 643 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 PEX5P50542 639 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 PRELPP51888 382 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 DLG4P78352 724 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 JAG1P78504 1218 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 TCEAL1Q15170 157 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 ABCB5Q2M3G0 1257 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 PREPLQ4J6C6 727 aaPredicted RBP10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 BTNL9Q6UXG8 535 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 PIGWQ7Z7B1 504 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 COL23A1Q86Y22 540 aaPredicted RBP10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 ARHGEF19Q8IW93 802 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 LRRC34Q8IZ02 419 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 UHMK1Q8TAS1 419 aaKnown RBP10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 SLC5A5Q92911 643 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 CHORDC1Q9UHD1 332 aaPredicted RBP10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 CNOT7Q9UIV1 285 aaKnown RBP10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 TPX2Q9ULW0 747 aaKnown RBP10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 TRPC6Q9Y210 931 aa10.85□□□□□ -0.67
SMARCA2-265ENST00000638139 ANKRD31Q8N7Z5 1873 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 THSD7AQ9UPZ6 1657 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 ASAP2O43150 1006 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 AGTP01019 485 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 COMTP21964 271 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 RFX1P22670 979 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 GPC5P78333 572 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 SF3A3Q12874 501 aaKnown RBP eCLIP10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 C6orf118Q5T5N4 469 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 CCDC137Q6PK04 289 aaKnown RBP10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 SLC9A9Q8IVB4 645 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 RPUSD2Q8IZ73 545 aaKnown RBP10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 SYCP3Q8IZU3 236 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 EPS8L3Q8TE67 593 aaKnown RBP10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 STRA6Q9BX79 667 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 KCNQ5Q9NR82 932 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 PRR12Q9ULL5 1215 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 PFASO15067 1338 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 EMSYQ7Z589 1322 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 TCRBV7S2A1N4TA0A589 114 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 ANKRD63C9JTQ0 380 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 PODXLO00592 558 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 BCRP11274 1271 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 FGFR4P22455 802 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 UBXN2AP68543 259 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 ADCY2Q08462 1091 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 MESDQ14696 234 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 WLSQ5T9L3 541 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 ZNF746Q6NUN9 644 aaPredicted RBP10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 TAX1BP1Q86VP1 789 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 NACC1Q96RE7 527 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 RPS6KC1Q96S38 1066 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 TMEM109Q9BVC6 243 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 MTFR1LQ9H019 292 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 CXorf56Q9H5V9 222 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 INTS9Q9NV88 658 aaKnown RBP10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 MTRF1LQ9UGC7 380 aaKnown RBP10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 ODF2LQ9ULJ1 636 aa10.84□□□□□ -0.67
SMARCA2-265ENST00000638139 G3V3G9 751 aa10.83□□□□□ -0.68
SMARCA2-265ENST00000638139 RIPK2O43353 540 aa10.83□□□□□ -0.68
SMARCA2-265ENST00000638139 GAS7O60861 476 aa10.83□□□□□ -0.68
SMARCA2-265ENST00000638139 CFBP00751 764 aa10.83□□□□□ -0.68
SMARCA2-265ENST00000638139 GBP1P32455 592 aa10.83□□□□□ -0.68
SMARCA2-265ENST00000638139 SLCO1A2P46721 670 aa10.83□□□□□ -0.68
SMARCA2-265ENST00000638139 PPP3CAQ08209 521 aa10.83□□□□□ -0.68
SMARCA2-265ENST00000638139 DCAF8Q5TAQ9 597 aa10.83□□□□□ -0.68
SMARCA2-265ENST00000638139 CPNE8Q86YQ8 564 aa10.83□□□□□ -0.68
SMARCA2-265ENST00000638139 KIAA0825Q8IV33 1275 aa10.83□□□□□ -0.68
SMARCA2-265ENST00000638139 CCDC50Q8IVM0 306 aa10.83□□□□□ -0.68
SMARCA2-265ENST00000638139 SPICE1Q8N0Z3 855 aa10.83□□□□□ -0.68
SMARCA2-265ENST00000638139 DAW1Q8N136 415 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms