RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 DNM3Q9UQ16 869 aa15.3■□□□□ 0.04
PNKP-228ENST00000637325 CNTNAP2Q9UHC6 1331 aa15.29■□□□□ 0.04
PNKP-228ENST00000637325 CARNS1A5YM72 827 aa15.29■□□□□ 0.04
PNKP-228ENST00000637325 MEIS3P2A8K0S8 358 aa15.29■□□□□ 0.04
PNKP-228ENST00000637325 OFD1O75665 1012 aa15.29■□□□□ 0.04
PNKP-228ENST00000637325 ITGA4P13612 1032 aa15.29■□□□□ 0.04
PNKP-228ENST00000637325 GTF2F1P35269 517 aaKnown RBP eCLIP15.29■□□□□ 0.047e-8■■■□□ 17.9
PNKP-228ENST00000637325 PBX3P40426 434 aa15.29■□□□□ 0.04
PNKP-228ENST00000637325 NRIP1P48552 1158 aa15.29■□□□□ 0.04
PNKP-228ENST00000637325 BCAR1P56945 870 aa15.29■□□□□ 0.04
PNKP-228ENST00000637325 CUL4AQ13619 759 aa15.29■□□□□ 0.04
PNKP-228ENST00000637325 TMEM132AQ24JP5 1023 aa15.29■□□□□ 0.04
PNKP-228ENST00000637325 UBXN11Q5T124 520 aa15.29■□□□□ 0.04
PNKP-228ENST00000637325 PTCRAQ6ISU1 281 aaPredicted RBP15.29■□□□□ 0.04
PNKP-228ENST00000637325 MRPL10Q7Z7H8 261 aaKnown RBP15.29■□□□□ 0.04
PNKP-228ENST00000637325 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.29■□□□□ 0.04
PNKP-228ENST00000637325 IFT74Q96LB3 600 aa15.29■□□□□ 0.04
PNKP-228ENST00000637325 FAM193BQ96PV7 902 aaPredicted RBP15.29■□□□□ 0.04
PNKP-228ENST00000637325 NFKBIZQ9BYH8 718 aa15.29■□□□□ 0.04
PNKP-228ENST00000637325 GBP3Q9H0R5 595 aa15.29■□□□□ 0.04
PNKP-228ENST00000637325 BHMT2Q9H2M3 363 aa15.29■□□□□ 0.04
PNKP-228ENST00000637325 TLE6Q9H808 572 aa15.29■□□□□ 0.04
PNKP-228ENST00000637325 RSAD1Q9HA92 442 aa15.29■□□□□ 0.04
PNKP-228ENST00000637325 ENTPD7Q9NQZ7 604 aa15.29■□□□□ 0.04
PNKP-228ENST00000637325 FAM50BQ9Y247 325 aa15.29■□□□□ 0.04
PNKP-228ENST00000637325 LZTS1Q9Y250 596 aa15.29■□□□□ 0.04
PNKP-228ENST00000637325 VPS37CA5D8V6 355 aaPredicted RBP15.28■□□□□ 0.04
PNKP-228ENST00000637325 PP2D1A8MPX8 630 aa15.28■□□□□ 0.04
PNKP-228ENST00000637325 NT5C1B-RDH14C9J2C7 533 aa15.28■□□□□ 0.04
PNKP-228ENST00000637325 ZC3H11AO75152 810 aaKnown RBP eCLIP15.28■□□□□ 0.04
PNKP-228ENST00000637325 ARF4P18085 180 aaPredicted RBP15.28■□□□□ 0.04
PNKP-228ENST00000637325 NCLP19338 710 aaKnown RBP15.28■□□□□ 0.04
PNKP-228ENST00000637325 PDCP20941 246 aa15.28■□□□□ 0.04
PNKP-228ENST00000637325 NDUFV1P49821 464 aa15.28■□□□□ 0.04
PNKP-228ENST00000637325 ERVFC1P60507 584 aa15.28■□□□□ 0.04
PNKP-228ENST00000637325 ATP2C1P98194 919 aaPredicted RBP15.28■□□□□ 0.04
PNKP-228ENST00000637325 BMS1Q14692 1282 aaKnown RBP15.28■□□□□ 0.04
PNKP-228ENST00000637325 PPP2R5AQ15172 486 aa15.28■□□□□ 0.04
PNKP-228ENST00000637325 IL17AQ16552 155 aa15.28■□□□□ 0.04
PNKP-228ENST00000637325 PLPP4Q5VZY2 271 aa15.28■□□□□ 0.04
PNKP-228ENST00000637325 AGMOQ6ZNB7 445 aa15.28■□□□□ 0.04
PNKP-228ENST00000637325 ADGRD2Q7Z7M1 963 aa15.28■□□□□ 0.04
PNKP-228ENST00000637325 HACE1Q8IYU2 909 aa15.28■□□□□ 0.04
PNKP-228ENST00000637325 DEPTORQ8TB45 409 aa15.28■□□□□ 0.04
PNKP-228ENST00000637325 TMEM169Q96HH4 297 aa15.28■□□□□ 0.04
PNKP-228ENST00000637325 EIF2AQ9BY44 585 aaKnown RBP15.28■□□□□ 0.04
PNKP-228ENST00000637325 CSRNP2Q9H175 543 aa15.28■□□□□ 0.04
PNKP-228ENST00000637325 C2orf40Q9H1Z8 148 aa15.28■□□□□ 0.04
PNKP-228ENST00000637325 UBN1Q9NPG3 1134 aa15.28■□□□□ 0.04
PNKP-228ENST00000637325 TBC1D13Q9NVG8 400 aa15.28■□□□□ 0.04
PNKP-228ENST00000637325 PRMT7Q9NVM4 692 aaPredicted RBP15.28■□□□□ 0.04
PNKP-228ENST00000637325 KANSL3Q9P2N6 904 aa15.28■□□□□ 0.04
PNKP-228ENST00000637325 PCDHGC5Q9Y5F6 944 aa15.28■□□□□ 0.04
PNKP-228ENST00000637325 BDP1A6H8Y1 2624 aa15.28■□□□□ 0.04
PNKP-228ENST00000637325 VWA3AA6NCI4 1184 aa15.27■□□□□ 0.04
PNKP-228ENST00000637325 EYA4O95677 639 aa15.27■□□□□ 0.04
PNKP-228ENST00000637325 LIG1P18858 919 aa15.27■□□□□ 0.04
PNKP-228ENST00000637325 CDC25AP30304 524 aa15.27■□□□□ 0.04
PNKP-228ENST00000637325 CA8P35219 290 aa15.27■□□□□ 0.04
PNKP-228ENST00000637325 COL19A1Q14993 1142 aa15.27■□□□□ 0.04
PNKP-228ENST00000637325 CLUL1Q15846 466 aa15.27■□□□□ 0.04
PNKP-228ENST00000637325 CTC1Q2NKJ3 1217 aa15.27■□□□□ 0.04
PNKP-228ENST00000637325 TMC7Q7Z402 723 aa15.27■□□□□ 0.04
PNKP-228ENST00000637325 BRAPQ7Z569 592 aa15.27■□□□□ 0.04
PNKP-228ENST00000637325 SLC39A11Q8N1S5 342 aa15.27■□□□□ 0.04
PNKP-228ENST00000637325 KIFAP3Q92845 792 aa15.27■□□□□ 0.04
PNKP-228ENST00000637325 CDK5RAP3Q96JB5 506 aa15.27■□□□□ 0.04
PNKP-228ENST00000637325 TCF25Q9BQ70 676 aa15.27■□□□□ 0.04
PNKP-228ENST00000637325 APOL6Q9BWW8 343 aa15.27■□□□□ 0.04
PNKP-228ENST00000637325 NRDE2Q9H7Z3 1164 aa15.27■□□□□ 0.04
PNKP-228ENST00000637325 NGRNQ9NPE2 291 aaKnown RBP15.27■□□□□ 0.04
PNKP-228ENST00000637325 IPPQ9Y573 584 aa15.27■□□□□ 0.04
PNKP-228ENST00000637325 GRXCR2A6NFK2 248 aa15.26■□□□□ 0.03
PNKP-228ENST00000637325 E9PMD0 336 aa15.26■□□□□ 0.03
PNKP-228ENST00000637325 FSCN2O14926 492 aa15.26■□□□□ 0.03
PNKP-228ENST00000637325 PER2O15055 1255 aa15.26■□□□□ 0.03
PNKP-228ENST00000637325 LINC01565O15544 149 aa15.26■□□□□ 0.03
PNKP-228ENST00000637325 B4GALT5O43286 388 aa15.26■□□□□ 0.03
PNKP-228ENST00000637325 NPTXRO95502 500 aa15.26■□□□□ 0.03
PNKP-228ENST00000637325 IL9P15248 144 aa15.26■□□□□ 0.03
PNKP-228ENST00000637325 LTBRP36941 435 aa15.26■□□□□ 0.03
PNKP-228ENST00000637325 NAMPTP43490 491 aa15.26■□□□□ 0.03
PNKP-228ENST00000637325 ADAM15Q13444 863 aa15.26■□□□□ 0.03
PNKP-228ENST00000637325 MAPK6Q16659 721 aa15.26■□□□□ 0.03
PNKP-228ENST00000637325 AMHR2Q16671 573 aa15.26■□□□□ 0.03
PNKP-228ENST00000637325 ARL6IP4Q66PJ3 421 aaKnown RBP15.26■□□□□ 0.03
PNKP-228ENST00000637325 SLC27A1Q6PCB7 646 aa15.26■□□□□ 0.03
PNKP-228ENST00000637325 EFHBQ8N7U6 833 aa15.26■□□□□ 0.03
PNKP-228ENST00000637325 TMEM87AQ8NBN3 555 aa15.26■□□□□ 0.03
PNKP-228ENST00000637325 SMG8Q8ND04 991 aaKnown RBP15.26■□□□□ 0.03
PNKP-228ENST00000637325 BSNDQ8WZ55 320 aa15.26■□□□□ 0.03
PNKP-228ENST00000637325 PRIMPOLQ96LW4 560 aa15.26■□□□□ 0.03
PNKP-228ENST00000637325 CDCA3Q99618 268 aaPredicted RBP15.26■□□□□ 0.03
PNKP-228ENST00000637325 POLD4Q9HCU8 107 aa15.26■□□□□ 0.03
PNKP-228ENST00000637325 GTF3C3Q9Y5Q9 886 aa15.26■□□□□ 0.03
PNKP-228ENST00000637325 FSD2A1L4K1 749 aa15.25■□□□□ 0.03
PNKP-228ENST00000637325 BMP15O95972 392 aa15.25■□□□□ 0.03
PNKP-228ENST00000637325 POMCP01189 267 aa15.25■□□□□ 0.03
PNKP-228ENST00000637325 ALDH2P05091 517 aa15.25■□□□□ 0.03
PNKP-228ENST00000637325 PRKCBP05771 671 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms