RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 GPR88Q9GZN0 384 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 KMT5AQ9NQR1 393 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 SEPT11Q9NVA2 429 aaKnown RBP13.13□□□□□ -0.31
CLN8-212ENST00000637083 TTC7AQ9ULT0 858 aaPredicted RBP13.13□□□□□ -0.31
CLN8-212ENST00000637083 TBX20Q9UMR3 447 aa13.13□□□□□ -0.31
CLN8-212ENST00000637083 DOCK1Q14185 1865 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 CCDC169A6NNP5 214 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 A6NNZ2 444 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 ATP9AO75110 1047 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 CAPN2P17655 700 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 GTF2H1P32780 548 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 ACTN2P35609 894 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 GYS2P54840 703 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 MFAP3P55082 362 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 HADHBP55084 474 aaKnown RBP13.12□□□□□ -0.31
CLN8-212ENST00000637083 RTP1P59025 263 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 TCEAL1Q15170 157 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 TUBB8Q3ZCM7 444 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 MAATS1Q7Z4T9 603 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 NT5DC3Q86UY8 548 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 MREGQ8N565 214 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 SLC35G2Q8TBE7 412 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 NTPCRQ9BSD7 190 aaKnown RBP13.12□□□□□ -0.31
CLN8-212ENST00000637083 SLITRK6Q9H5Y7 841 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 TMOD4Q9NZQ9 345 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 ADAMTS5Q9UNA0 930 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 PPP2R3BQ9Y5P8 575 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 MYPNQ86TC9 1320 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 ZC3H4Q9UPT8 1303 aaKnown RBP13.12□□□□□ -0.31
CLN8-212ENST00000637083 FOXN3O00409 490 aaPredicted RBP13.12□□□□□ -0.31
CLN8-212ENST00000637083 DGAT1O75907 488 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 CCNE2O96020 404 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 IVLP07476 585 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 PTPRAP18433 802 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 GCLMP48507 274 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 KRT39Q6A163 491 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 SNRNP48Q6IEG0 339 aaKnown RBP13.12□□□□□ -0.31
CLN8-212ENST00000637083 METTL13Q8N6R0 699 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 FAM76AQ8TAV0 307 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 TMC2Q8TDI7 906 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 MORC4Q8TE76 937 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 IFT81Q8WYA0 676 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 GDAP1L1Q96MZ0 367 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 WRNIP1Q96S55 665 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 ACAD9Q9H845 621 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 HOXC10Q9NYD6 342 aa13.12□□□□□ -0.31
CLN8-212ENST00000637083 GOLGA6CA6NDK9 693 aa13.11□□□□□ -0.31
CLN8-212ENST00000637083 KRIT1O00522 736 aa13.11□□□□□ -0.31
CLN8-212ENST00000637083 RTN2O75298 545 aa13.11□□□□□ -0.31
CLN8-212ENST00000637083 GLI1P08151 1106 aa13.11□□□□□ -0.31
CLN8-212ENST00000637083 GOLGA6DP0CG33 693 aa13.11□□□□□ -0.31
CLN8-212ENST00000637083 GZMAP12544 262 aa13.11□□□□□ -0.31
CLN8-212ENST00000637083 NPTX2P47972 431 aa13.11□□□□□ -0.31
CLN8-212ENST00000637083 DLG4P78352 724 aa13.11□□□□□ -0.31
CLN8-212ENST00000637083 PPATQ06203 517 aa13.11□□□□□ -0.31
CLN8-212ENST00000637083 PPP3CAQ08209 521 aa13.11□□□□□ -0.31
CLN8-212ENST00000637083 SNRNP35Q16560 246 aaKnown RBP13.11□□□□□ -0.31
CLN8-212ENST00000637083 UGCGQ16739 394 aa13.11□□□□□ -0.31
CLN8-212ENST00000637083 CFAP58Q5T655 872 aa13.11□□□□□ -0.31
CLN8-212ENST00000637083 TMEM161BQ8NDZ6 487 aa13.11□□□□□ -0.31
CLN8-212ENST00000637083 CEP170P1Q96L14 293 aa13.11□□□□□ -0.31
CLN8-212ENST00000637083 IFT74Q96LB3 600 aa13.11□□□□□ -0.31
CLN8-212ENST00000637083 TEX13BQ9BXU2 312 aa13.11□□□□□ -0.31
CLN8-212ENST00000637083 ISCUQ9H1K1 167 aa13.11□□□□□ -0.31
CLN8-212ENST00000637083 CARD9Q9H257 536 aa13.11□□□□□ -0.31
CLN8-212ENST00000637083 TAF1DQ9H5J8 278 aaPredicted RBP13.11□□□□□ -0.31
CLN8-212ENST00000637083 GOLGA6AQ9NYA3 693 aa13.11□□□□□ -0.31
CLN8-212ENST00000637083 GABBR1Q9UBS5 961 aa13.11□□□□□ -0.31
CLN8-212ENST00000637083 NOC2LQ9Y3T9 749 aaKnown RBP13.11□□□□□ -0.31
CLN8-212ENST00000637083 GOLGA6L10A0A0M3HER8 536 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 DENND3A2RUS2 1198 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 MIF4GDA9UHW6 222 aaKnown RBP13.1□□□□□ -0.31
CLN8-212ENST00000637083 AGPSO00116 658 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 RPS6KA5O75582 802 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 ABCB4P21439 1286 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 CNGA1P29973 690 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 PRAMEF18Q5VWM3 479 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 MIS18BP1Q6P0N0 1132 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 ANO5Q75V66 913 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 CCDC125Q86Z20 511 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 KLHL7Q8IXQ5 586 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 REPS2Q8NFH8 660 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 SH3GL2Q99962 352 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 TMEM117Q9H0C3 514 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 KIAA1586Q9HCI6 787 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 TMEM8AQ9HCN3 771 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 NFU1Q9UMS0 254 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 CD2APQ9Y5K6 639 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 KIAA0391O15091 583 aaKnown RBP13.1□□□□□ -0.31
CLN8-212ENST00000637083 RAD51CO43502 376 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 LRRN2O75325 713 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 GARTP22102 1010 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 CARSP49589 748 aaKnown RBP13.1□□□□□ -0.31
CLN8-212ENST00000637083 RNASE9P60153 205 aaKnown RBP13.1□□□□□ -0.31
CLN8-212ENST00000637083 GPC5P78333 572 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 ZSCAN26Q16670 478 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 PLA2G4FQ68DD2 849 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 CATSPERGQ6ZRH7 1159 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 ENOSF1Q7L5Y1 443 aa13.1□□□□□ -0.31
CLN8-212ENST00000637083 UBL4BQ8N7F7 174 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms