RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 USO1O60763 962 aaKnown RBP19.92■□□□□ 0.78
PNKP-225ENST00000636214 OR52Z1P0C646 297 aa19.92■□□□□ 0.78
PNKP-225ENST00000636214 RARRES1P49788 294 aa19.92■□□□□ 0.78
PNKP-225ENST00000636214 PTENP60484 403 aa19.92■□□□□ 0.78
PNKP-225ENST00000636214 VPS52Q8N1B4 723 aa19.92■□□□□ 0.78
PNKP-225ENST00000636214 PIGOQ8TEQ8 1089 aa19.92■□□□□ 0.78
PNKP-225ENST00000636214 TRIM6Q9C030 488 aaPredicted RBP19.92■□□□□ 0.78
PNKP-225ENST00000636214 TMEM60Q9H2L4 133 aa19.92■□□□□ 0.78
PNKP-225ENST00000636214 TUFT1Q9NNX1 390 aa19.92■□□□□ 0.78
PNKP-225ENST00000636214 UBN1Q9NPG3 1134 aa19.92■□□□□ 0.78
PNKP-225ENST00000636214 XPNPEP1Q9NQW7 623 aa19.92■□□□□ 0.78
PNKP-225ENST00000636214 STK39Q9UEW8 545 aa19.92■□□□□ 0.78
PNKP-225ENST00000636214 KIF3AQ9Y496 699 aa19.92■□□□□ 0.78
PNKP-225ENST00000636214 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.91■□□□□ 0.78
PNKP-225ENST00000636214 WNT7AO00755 349 aa19.91■□□□□ 0.78
PNKP-225ENST00000636214 OFD1O75665 1012 aa19.91■□□□□ 0.78
PNKP-225ENST00000636214 XRCC6P12956 609 aaKnown RBP eCLIP19.91■□□□□ 0.78
PNKP-225ENST00000636214 ITGA4P13612 1032 aa19.91■□□□□ 0.78
PNKP-225ENST00000636214 GIT2Q14161 759 aa19.91■□□□□ 0.78
PNKP-225ENST00000636214 ZNF174Q15697 407 aa19.91■□□□□ 0.78
PNKP-225ENST00000636214 TPRNQ4KMQ1 711 aa19.91■□□□□ 0.78
PNKP-225ENST00000636214 HAUS3Q68CZ6 603 aa19.91■□□□□ 0.78
PNKP-225ENST00000636214 MCPH1Q8NEM0 835 aa19.91■□□□□ 0.78
PNKP-225ENST00000636214 NACC1Q96RE7 527 aa19.91■□□□□ 0.78
PNKP-225ENST00000636214 PHF7Q9BWX1 381 aaPredicted RBP19.91■□□□□ 0.78
PNKP-225ENST00000636214 POLR3FQ9H1D9 316 aaPredicted RBP19.91■□□□□ 0.78
PNKP-225ENST00000636214 NRDE2Q9H7Z3 1164 aa19.91■□□□□ 0.78
PNKP-225ENST00000636214 UPF2Q9HAU5 1272 aaKnown RBP19.91■□□□□ 0.78
PNKP-225ENST00000636214 RAPGEFL1Q9UHV5 662 aa19.91■□□□□ 0.78
PNKP-225ENST00000636214 C2orf71A6NGG8 1288 aa19.9■□□□□ 0.78
PNKP-225ENST00000636214 MEIS3P2A8K0S8 358 aa19.9■□□□□ 0.78
PNKP-225ENST00000636214 PRR33A8MZF0 331 aa19.9■□□□□ 0.78
PNKP-225ENST00000636214 ST18O60284 1047 aa19.9■□□□□ 0.78
PNKP-225ENST00000636214 CXCL14O95715 111 aa19.9■□□□□ 0.78
PNKP-225ENST00000636214 HOXB8P17481 243 aaPredicted RBP19.9■□□□□ 0.78
PNKP-225ENST00000636214 NCLP19338 710 aaKnown RBP19.9■□□□□ 0.78
PNKP-225ENST00000636214 TRAPPC10P48553 1259 aa19.9■□□□□ 0.78
PNKP-225ENST00000636214 POU5F1BQ06416 359 aa19.9■□□□□ 0.78
PNKP-225ENST00000636214 CAPSQ13938 189 aa19.9■□□□□ 0.78
PNKP-225ENST00000636214 TTC38Q5R3I4 469 aa19.9■□□□□ 0.78
PNKP-225ENST00000636214 ANKRD54Q6NXT1 300 aa19.9■□□□□ 0.78
PNKP-225ENST00000636214 MRPL10Q7Z7H8 261 aaKnown RBP19.9■□□□□ 0.78
PNKP-225ENST00000636214 DDX53Q86TM3 631 aaKnown RBP19.9■□□□□ 0.78
PNKP-225ENST00000636214 NOSTRINQ8IVI9 506 aa19.9■□□□□ 0.78
PNKP-225ENST00000636214 MRPL43Q8N983 215 aaKnown RBP19.9■□□□□ 0.78
PNKP-225ENST00000636214 FBXO18Q8NFZ0 1043 aa19.9■□□□□ 0.78
PNKP-225ENST00000636214 ASAP3Q8TDY4 903 aa19.9■□□□□ 0.78
PNKP-225ENST00000636214 IGSF21Q96ID5 467 aa19.9■□□□□ 0.78
PNKP-225ENST00000636214 LRRIQ4A6NIV6 560 aa19.89■□□□□ 0.77
PNKP-225ENST00000636214 TSPAN1O60635 241 aa19.89■□□□□ 0.77
PNKP-225ENST00000636214 GALTP07902 379 aa19.89■□□□□ 0.77
PNKP-225ENST00000636214 HOXA11P31270 313 aaPredicted RBP19.89■□□□□ 0.77
PNKP-225ENST00000636214 RBM10P98175 930 aaKnown RBP19.89■□□□□ 0.77
PNKP-225ENST00000636214 TMEM132AQ24JP5 1023 aa19.89■□□□□ 0.77
PNKP-225ENST00000636214 C8orf34Q49A92 452 aa19.89■□□□□ 0.77
PNKP-225ENST00000636214 CES5AQ6NT32 575 aa19.89■□□□□ 0.77
PNKP-225ENST00000636214 TMEM184AQ6ZMB5 413 aa19.89■□□□□ 0.77
PNKP-225ENST00000636214 AGMOQ6ZNB7 445 aa19.89■□□□□ 0.77
PNKP-225ENST00000636214 ZBTB8OSQ8IWT0 167 aa19.89■□□□□ 0.77
PNKP-225ENST00000636214 VN1R2Q8NFZ6 395 aa19.89■□□□□ 0.77
PNKP-225ENST00000636214 CPB2Q96IY4 423 aa19.89■□□□□ 0.77
PNKP-225ENST00000636214 POLR3CQ9BUI4 534 aaPredicted RBP19.89■□□□□ 0.77
PNKP-225ENST00000636214 ARHGEF35A5YM69 484 aa19.88■□□□□ 0.77
PNKP-225ENST00000636214 SPDYE4A6NLX3 237 aa19.88■□□□□ 0.77
PNKP-225ENST00000636214 ARL2P36404 184 aa19.88■□□□□ 0.77
PNKP-225ENST00000636214 SLC11A1P49279 550 aa19.88■□□□□ 0.77
PNKP-225ENST00000636214 RABEP1Q15276 862 aa19.88■□□□□ 0.77
PNKP-225ENST00000636214 UBXN11Q5T124 520 aa19.88■□□□□ 0.77
PNKP-225ENST00000636214 MAEAQ7L5Y9 396 aa19.88■□□□□ 0.77
PNKP-225ENST00000636214 IFNLR1Q8IU57 520 aaPredicted RBP19.88■□□□□ 0.77
PNKP-225ENST00000636214 RNF135Q8IUD6 432 aa19.88■□□□□ 0.77
PNKP-225ENST00000636214 RPGRIP1Q96KN7 1286 aa19.88■□□□□ 0.77
PNKP-225ENST00000636214 TMEM175Q9BSA9 504 aa19.88■□□□□ 0.77
PNKP-225ENST00000636214 APOL6Q9BWW8 343 aa19.88■□□□□ 0.77
PNKP-225ENST00000636214 APOL5Q9BWW9 433 aa19.88■□□□□ 0.77
PNKP-225ENST00000636214 NFKBIZQ9BYH8 718 aa19.88■□□□□ 0.77
PNKP-225ENST00000636214 RAB34Q9BZG1 259 aa19.88■□□□□ 0.77
PNKP-225ENST00000636214 ZBP1Q9H171 429 aa19.88■□□□□ 0.77
PNKP-225ENST00000636214 CSRNP2Q9H175 543 aa19.88■□□□□ 0.77
PNKP-225ENST00000636214 C11orf16Q9NQ32 467 aa19.88■□□□□ 0.77
PNKP-225ENST00000636214 MUTYHQ9UIF7 546 aa19.88■□□□□ 0.77
PNKP-225ENST00000636214 FAN1Q9Y2M0 1017 aa19.88■□□□□ 0.77
PNKP-225ENST00000636214 IPPQ9Y573 584 aa19.88■□□□□ 0.77
PNKP-225ENST00000636214 NR1I2O75469 434 aa19.87■□□□□ 0.77
PNKP-225ENST00000636214 POMCP01189 267 aa19.87■□□□□ 0.77
PNKP-225ENST00000636214 ALDH2P05091 517 aa19.87■□□□□ 0.77
PNKP-225ENST00000636214 CTSAP10619 480 aa19.87■□□□□ 0.77
PNKP-225ENST00000636214 GLRA2P23416 452 aa19.87■□□□□ 0.77
PNKP-225ENST00000636214 MBTD1Q05BQ5 628 aa19.87■□□□□ 0.77
PNKP-225ENST00000636214 CBX2Q14781 532 aaPredicted RBP19.87■□□□□ 0.77
PNKP-225ENST00000636214 CATSPER3Q86XQ3 398 aa19.87■□□□□ 0.77
PNKP-225ENST00000636214 FAM122AQ96E09 287 aa19.87■□□□□ 0.77
PNKP-225ENST00000636214 DZANK1Q9NVP4 752 aa19.87■□□□□ 0.77
PNKP-225ENST00000636214 DNAJB4Q9UDY4 337 aa19.87■□□□□ 0.77
PNKP-225ENST00000636214 DBR1Q9UK59 544 aaKnown RBP19.87■□□□□ 0.77
PNKP-225ENST00000636214 HCFC2Q9Y5Z7 792 aa19.87■□□□□ 0.77
PNKP-225ENST00000636214 STK24Q9Y6E0 443 aa19.87■□□□□ 0.77
PNKP-225ENST00000636214 A0A087WWV3 80 aa19.86■□□□□ 0.77
PNKP-225ENST00000636214 CLASP2O75122 1294 aaKnown RBP19.86■□□□□ 0.77
PNKP-225ENST00000636214 MED24O75448 989 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms