RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 PDIA2Q13087 525 aaKnown RBP12.4□□□□□ -0.42
COL11A1-211ENST00000635193 CDO1Q16878 200 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 AGBL2Q5U5Z8 902 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 KIF2BQ8N4N8 673 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 PRPF38AQ8NAV1 312 aaKnown RBP12.4□□□□□ -0.42
COL11A1-211ENST00000635193 MSTO1Q9BUK6 570 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 DHX36Q9H2U1 1008 aaKnown RBP12.4□□□□□ -0.42
COL11A1-211ENST00000635193 RBM12Q9NTZ6 932 aaKnown RBP12.4□□□□□ -0.42
COL11A1-211ENST00000635193 AGPAT5Q9NUQ2 364 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 BSDC1Q9NW68 430 aaPredicted RBP12.4□□□□□ -0.42
COL11A1-211ENST00000635193 TMEM260Q9NX78 707 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 SLAIN2Q9P270 581 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 MAP3K4Q9Y6R4 1608 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 H3BRJ5 948 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 ZBTB5O15062 677 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 ESRRBO95718 433 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 MAP3K7CLP57077 242 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 GPS1Q13098 491 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 KIAA1755Q5JYT7 1200 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 ZBTB41Q5SVQ8 909 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 DAB2IPQ5VWQ8 1189 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 MYLK4Q86YV6 388 aaPredicted RBP12.4□□□□□ -0.42
COL11A1-211ENST00000635193 ADSSL1Q8N142 457 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 C7orf31Q8N865 590 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 C1orf54Q8WWF1 131 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 HEXIM2Q96MH2 286 aaKnown RBP12.4□□□□□ -0.42
COL11A1-211ENST00000635193 ZIM3Q96PE6 472 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 PCDHA6Q9UN73 950 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 PCDHA8Q9Y5H6 950 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.4□□□□□ -0.42
COL11A1-211ENST00000635193 E2F6O75461 281 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 UBTFL6P0CB48 400 aaPredicted RBP12.4□□□□□ -0.42
COL11A1-211ENST00000635193 SERPINB10P48595 397 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 SURF1Q15526 300 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 SLC18A3Q16572 532 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 KIF19Q2TAC6 998 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 TAF1BQ53T94 588 aaPredicted RBP12.4□□□□□ -0.42
COL11A1-211ENST00000635193 SUSD4Q5VX71 490 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 IZUMO3Q5VZ72 239 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 PASD1Q8IV76 773 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 SH3RF3Q8TEJ3 882 aaPredicted RBP12.4□□□□□ -0.42
COL11A1-211ENST00000635193 C11orf70Q9BRQ4 267 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 SNX25Q9H3E2 840 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 LCMT1Q9UIC8 334 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 GSG1L2A8MUP6 293 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 IGF2BP3O00425 579 aaKnown RBP eCLIP12.4□□□□□ -0.42
COL11A1-211ENST00000635193 XPOTO43592 962 aaKnown RBP12.4□□□□□ -0.42
COL11A1-211ENST00000635193 MAP4P27816 1152 aaKnown RBP12.4□□□□□ -0.42
COL11A1-211ENST00000635193 SOX5P35711 763 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 SNAP25P60880 206 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 KRT17Q04695 432 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 DCAF15Q66K64 600 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 NCAPG2Q86XI2 1143 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 APOL6Q9BWW8 343 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 WWP1Q9H0M0 922 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 ADA2Q9NZK5 511 aa12.4□□□□□ -0.42
COL11A1-211ENST00000635193 TSPOAP1O95153 1857 aa12.4□□□□□ -0.43
COL11A1-211ENST00000635193 CCND2P30279 289 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 PPM1NQ8N819 430 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 DACH2Q96NX9 599 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 ANKARQ7Z5J8 1434 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 SSU72P8A0A1W2PR75 194 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 PPEF1O14829 653 aaPredicted RBP12.39□□□□□ -0.43
COL11A1-211ENST00000635193 GYPCP04921 128 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 OSTNP61366 133 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 STAT4Q14765 748 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 MORF4L2Q15014 288 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 LRRC36Q1X8D7 754 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 SLFN12LQ6IEE8 588 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 TMEM35BQ8NCS4 154 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 CDHR1Q96JP9 859 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 L3MBTL1Q9Y468 752 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 CPDO75976 1380 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 ZCCHC11Q5TAX3 1644 aaKnown RBP12.39□□□□□ -0.43
COL11A1-211ENST00000635193 KPNA7A9QM74 516 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 PSAPP07602 524 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 H2AFXP16104 143 aaPredicted RBP12.39□□□□□ -0.43
COL11A1-211ENST00000635193 ERFP50548 548 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 TFDP2Q14188 446 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 KLC3Q6P597 504 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 REXO1L1PQ8IX06 675 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 OR2W6PQ8NHA6 318 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 SKA2Q8WVK7 121 aaPredicted RBP12.39□□□□□ -0.43
COL11A1-211ENST00000635193 ERP27Q96DN0 273 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 TRIM51Q9BSJ1 452 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 ARHGAP26Q9UNA1 814 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 MROH7-TTC4A0A0A0MT08 1334 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 SERPINI2O75830 405 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 RFX1P22670 979 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 MARK3P27448 753 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 VAMP7P51809 220 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 PPP1R18Q6NYC8 613 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 ATP11CQ8NB49 1132 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 LBHD1Q9BQE6 289 aaPredicted RBP12.39□□□□□ -0.43
COL11A1-211ENST00000635193 FUT8Q9BYC5 575 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 PI4KBQ9UBF8 816 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 ZNF609O15014 1411 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 ADCY3O60266 1144 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 CALB1P05937 261 aa12.39□□□□□ -0.43
COL11A1-211ENST00000635193 ARHGDIAP52565 204 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms