RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 NRDE2Q9H7Z3 1164 aa13.47□□□□□ -0.25
UBR1-212ENST00000627960 C11orf16Q9NQ32 467 aa13.47□□□□□ -0.25
UBR1-212ENST00000627960 INPP5FQ9Y2H2 1132 aa13.47□□□□□ -0.25
UBR1-212ENST00000627960 CNTNAP2Q9UHC6 1331 aa13.46□□□□□ -0.25
UBR1-212ENST00000627960 C2orf71A6NGG8 1288 aa13.46□□□□□ -0.25
UBR1-212ENST00000627960 TSPAN1O60635 241 aa13.46□□□□□ -0.25
UBR1-212ENST00000627960 ZC3H11AO75152 810 aaKnown RBP eCLIP13.46□□□□□ -0.25
UBR1-212ENST00000627960 MED24O75448 989 aa13.46□□□□□ -0.25
UBR1-212ENST00000627960 ERLIN2O94905 339 aa13.46□□□□□ -0.25
UBR1-212ENST00000627960 GALTP07902 379 aa13.46□□□□□ -0.25
UBR1-212ENST00000627960 OR52Z1P0C646 297 aa13.46□□□□□ -0.25
UBR1-212ENST00000627960 NCLP19338 710 aaKnown RBP13.46□□□□□ -0.25
UBR1-212ENST00000627960 GLRA2P23416 452 aa13.46□□□□□ -0.25
UBR1-212ENST00000627960 AXLP30530 894 aa13.46□□□□□ -0.25
UBR1-212ENST00000627960 TRAPPC10P48553 1259 aa13.46□□□□□ -0.25
UBR1-212ENST00000627960 RNASELQ05823 741 aaKnown RBP13.46□□□□□ -0.25
UBR1-212ENST00000627960 SMC1AQ14683 1233 aaKnown RBP13.46□□□□□ -0.25
UBR1-212ENST00000627960 TTC38Q5R3I4 469 aa13.46□□□□□ -0.25
UBR1-212ENST00000627960 NOSTRINQ8IVI9 506 aa13.46□□□□□ -0.25
UBR1-212ENST00000627960 MRPL43Q8N983 215 aaKnown RBP13.46□□□□□ -0.25
UBR1-212ENST00000627960 SMG8Q8ND04 991 aaKnown RBP13.46□□□□□ -0.25
UBR1-212ENST00000627960 CNNM3Q8NE01 707 aa13.46□□□□□ -0.25
UBR1-212ENST00000627960 URGCPQ8TCY9 931 aa13.46□□□□□ -0.25
UBR1-212ENST00000627960 CCDC51Q96ER9 411 aa13.46□□□□□ -0.25
UBR1-212ENST00000627960 IGSF21Q96ID5 467 aa13.46□□□□□ -0.25
UBR1-212ENST00000627960 NACC1Q96RE7 527 aa13.46□□□□□ -0.25
UBR1-212ENST00000627960 NFKBIZQ9BYH8 718 aa13.46□□□□□ -0.25
UBR1-212ENST00000627960 RSAD1Q9HA92 442 aa13.46□□□□□ -0.25
UBR1-212ENST00000627960 RAPGEFL1Q9UHV5 662 aa13.46□□□□□ -0.25
UBR1-212ENST00000627960 DBR1Q9UK59 544 aaKnown RBP13.46□□□□□ -0.25
UBR1-212ENST00000627960 TDRD15B5MCY1 1934 aaKnown RBP13.46□□□□□ -0.25
UBR1-212ENST00000627960 INO80B-WBP1J3KQ70 363 aa13.45□□□□□ -0.26
UBR1-212ENST00000627960 DCXO43602 365 aa13.45□□□□□ -0.26
UBR1-212ENST00000627960 USO1O60763 962 aaKnown RBP13.45□□□□□ -0.26
UBR1-212ENST00000627960 CXCL14O95715 111 aa13.45□□□□□ -0.26
UBR1-212ENST00000627960 SRGAP2BP0DMP2 458 aa13.45□□□□□ -0.26
UBR1-212ENST00000627960 RPA1P27694 616 aa13.45□□□□□ -0.26
UBR1-212ENST00000627960 SLC11A1P49279 550 aa13.45□□□□□ -0.26
UBR1-212ENST00000627960 MBTD1Q05BQ5 628 aa13.45□□□□□ -0.26
UBR1-212ENST00000627960 NCBP1Q09161 790 aaKnown RBP13.45□□□□□ -0.26
UBR1-212ENST00000627960 GNL2Q13823 731 aaKnown RBP13.45□□□□□ -0.26
UBR1-212ENST00000627960 RABEP1Q15276 862 aa13.45□□□□□ -0.26
UBR1-212ENST00000627960 AMHR2Q16671 573 aa13.45□□□□□ -0.26
UBR1-212ENST00000627960 ANKRD54Q6NXT1 300 aa13.45□□□□□ -0.26
UBR1-212ENST00000627960 LLGL2Q6P1M3 1020 aa13.45□□□□□ -0.26
UBR1-212ENST00000627960 DDX53Q86TM3 631 aaKnown RBP13.45□□□□□ -0.26
UBR1-212ENST00000627960 TMEM173Q86WV6 379 aaPredicted RBP13.45□□□□□ -0.26
UBR1-212ENST00000627960 ZNF280BQ86YH2 543 aa13.45□□□□□ -0.26
UBR1-212ENST00000627960 C4orf32Q8N8J7 132 aa13.45□□□□□ -0.26
UBR1-212ENST00000627960 CPB2Q96IY4 423 aa13.45□□□□□ -0.26
UBR1-212ENST00000627960 GBP3Q9H0R5 595 aa13.45□□□□□ -0.26
UBR1-212ENST00000627960 POLR3FQ9H1D9 316 aaPredicted RBP13.45□□□□□ -0.26
UBR1-212ENST00000627960 UBN1Q9NPG3 1134 aa13.45□□□□□ -0.26
UBR1-212ENST00000627960 KANSL3Q9P2N6 904 aa13.45□□□□□ -0.26
UBR1-212ENST00000627960 DNAJB4Q9UDY4 337 aa13.45□□□□□ -0.26
UBR1-212ENST00000627960 NOL7Q9UMY1 257 aaKnown RBP13.45□□□□□ -0.26
UBR1-212ENST00000627960 USP15Q9Y4E8 981 aaPredicted RBP13.45□□□□□ -0.26
UBR1-212ENST00000627960 FAM86C2PA6NEL3 165 aa13.44□□□□□ -0.26
UBR1-212ENST00000627960 B4GALT3O60512 393 aa13.44□□□□□ -0.26
UBR1-212ENST00000627960 CLASP2O75122 1294 aaKnown RBP13.44□□□□□ -0.26
UBR1-212ENST00000627960 DDHD2O94830 711 aa13.44□□□□□ -0.26
UBR1-212ENST00000627960 ITGA4P13612 1032 aa13.44□□□□□ -0.26
UBR1-212ENST00000627960 U2AF2P26368 475 aaKnown RBP eCLIP13.44□□□□□ -0.26
UBR1-212ENST00000627960 AFF1P51825 1210 aaKnown RBP13.44□□□□□ -0.26
UBR1-212ENST00000627960 BMS1Q14692 1282 aaKnown RBP13.44□□□□□ -0.26
UBR1-212ENST00000627960 NOTUMQ6P988 496 aa13.44□□□□□ -0.26
UBR1-212ENST00000627960 SYCE2Q6PIF2 218 aa13.44□□□□□ -0.26
UBR1-212ENST00000627960 VPS52Q8N1B4 723 aa13.44□□□□□ -0.26
UBR1-212ENST00000627960 MCPH1Q8NEM0 835 aa13.44□□□□□ -0.26
UBR1-212ENST00000627960 ERMNQ8TAM6 284 aa13.44□□□□□ -0.26
UBR1-212ENST00000627960 BCL7CQ8WUZ0 217 aaPredicted RBP13.44□□□□□ -0.26
UBR1-212ENST00000627960 SUSD6Q92537 303 aa13.44□□□□□ -0.26
UBR1-212ENST00000627960 FAM193BQ96PV7 902 aaPredicted RBP13.44□□□□□ -0.26
UBR1-212ENST00000627960 TMEM175Q9BSA9 504 aa13.44□□□□□ -0.26
UBR1-212ENST00000627960 EIF2AQ9BY44 585 aaKnown RBP13.44□□□□□ -0.26
UBR1-212ENST00000627960 ZBP1Q9H171 429 aa13.44□□□□□ -0.26
UBR1-212ENST00000627960 CSRNP2Q9H175 543 aa13.44□□□□□ -0.26
UBR1-212ENST00000627960 S1PR5Q9H228 398 aa13.44□□□□□ -0.26
UBR1-212ENST00000627960 IPPQ9Y573 584 aa13.44□□□□□ -0.26
UBR1-212ENST00000627960 LOC730098B7Z3J9 87 aa13.43□□□□□ -0.26
UBR1-212ENST00000627960 INPPL1O15357 1258 aa13.43□□□□□ -0.26
UBR1-212ENST00000627960 POMCP01189 267 aa13.43□□□□□ -0.26
UBR1-212ENST00000627960 ALDH2P05091 517 aa13.43□□□□□ -0.26
UBR1-212ENST00000627960 CTSAP10619 480 aa13.43□□□□□ -0.26
UBR1-212ENST00000627960 HOXB8P17481 243 aaPredicted RBP13.43□□□□□ -0.26
UBR1-212ENST00000627960 ARF4P18085 180 aaPredicted RBP13.43□□□□□ -0.26
UBR1-212ENST00000627960 MUTP22033 750 aa13.43□□□□□ -0.26
UBR1-212ENST00000627960 TOB1P50616 345 aaPredicted RBP13.43□□□□□ -0.26
UBR1-212ENST00000627960 FXR2P51116 673 aaKnown RBP eCLIP13.43□□□□□ -0.26
UBR1-212ENST00000627960 NBR1Q14596 966 aa13.43□□□□□ -0.26
UBR1-212ENST00000627960 POTEGQ6S5H5 508 aa13.43□□□□□ -0.26
UBR1-212ENST00000627960 MAEAQ7L5Y9 396 aa13.43□□□□□ -0.26
UBR1-212ENST00000627960 RNF135Q8IUD6 432 aa13.43□□□□□ -0.26
UBR1-212ENST00000627960 CASP10Q92851 521 aa13.43□□□□□ -0.26
UBR1-212ENST00000627960 PHF7Q9BWX1 381 aaPredicted RBP13.43□□□□□ -0.26
UBR1-212ENST00000627960 VN1R3Q9BXE9 311 aa13.43□□□□□ -0.26
UBR1-212ENST00000627960 RNF39Q9H2S5 420 aa13.43□□□□□ -0.26
UBR1-212ENST00000627960 GPRC5CQ9NQ84 441 aa13.43□□□□□ -0.26
UBR1-212ENST00000627960 FAN1Q9Y2M0 1017 aa13.43□□□□□ -0.26
UBR1-212ENST00000627960 IRAK3Q9Y616 596 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms