RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 SPTBN5Q9NRC6 3674 aaKnown RBP24.74■■□□□ 1.55
SF1-220ENST00000626028 VPS37CA5D8V6 355 aaPredicted RBP24.74■■□□□ 1.55
SF1-220ENST00000626028 LRRIQ4A6NIV6 560 aa24.74■■□□□ 1.55
SF1-220ENST00000626028 AMHR2Q16671 573 aa24.74■■□□□ 1.55
SF1-220ENST00000626028 TCEAL5Q5H9L2 206 aa24.74■■□□□ 1.55
SF1-220ENST00000626028 UBXN11Q5T124 520 aa24.74■■□□□ 1.55
SF1-220ENST00000626028 KCNT2Q6UVM3 1135 aa24.74■■□□□ 1.55
SF1-220ENST00000626028 THNSL1Q8IYQ7 743 aa24.74■■□□□ 1.55
SF1-220ENST00000626028 HACE1Q8IYU2 909 aa24.74■■□□□ 1.55
SF1-220ENST00000626028 CSRNP2Q9H175 543 aa24.74■■□□□ 1.55
SF1-220ENST00000626028 GPRC5CQ9NQ84 441 aa24.74■■□□□ 1.55
SF1-220ENST00000626028 ZMYM2Q9UBW7 1377 aa24.74■■□□□ 1.55
SF1-220ENST00000626028 A0A1B0GUA9 196 aa24.73■■□□□ 1.55
SF1-220ENST00000626028 VWA3AA6NCI4 1184 aa24.73■■□□□ 1.55
SF1-220ENST00000626028 OFD1O75665 1012 aa24.73■■□□□ 1.55
SF1-220ENST00000626028 ARF4P18085 180 aaPredicted RBP24.73■■□□□ 1.55
SF1-220ENST00000626028 SYT1P21579 422 aa24.73■■□□□ 1.55
SF1-220ENST00000626028 ALDH7A1P49419 539 aaKnown RBP24.73■■□□□ 1.55
SF1-220ENST00000626028 EFNA5P52803 228 aa24.73■■□□□ 1.55
SF1-220ENST00000626028 KRT17Q04695 432 aa24.73■■□□□ 1.55
SF1-220ENST00000626028 NOMO2Q5JPE7 1267 aa24.73■■□□□ 1.55
SF1-220ENST00000626028 URGCPQ8TCY9 931 aa24.73■■□□□ 1.55
SF1-220ENST00000626028 IFT74Q96LB3 600 aa24.73■■□□□ 1.55
SF1-220ENST00000626028 FZD8Q9H461 694 aa24.73■■□□□ 1.55
SF1-220ENST00000626028 C17orf75Q9HAS0 396 aa24.73■■□□□ 1.55
SF1-220ENST00000626028 TLR9Q9NR96 1032 aa24.73■■□□□ 1.55
SF1-220ENST00000626028 SPG21Q9NZD8 308 aa24.73■■□□□ 1.55
SF1-220ENST00000626028 KCND2Q9NZV8 630 aa24.73■■□□□ 1.55
SF1-220ENST00000626028 KCNG1Q9UIX4 513 aa24.73■■□□□ 1.55
SF1-220ENST00000626028 PHLPP2Q6ZVD8 1323 aa24.72■■□□□ 1.55
SF1-220ENST00000626028 BMP1P13497 986 aa24.72■■□□□ 1.55
SF1-220ENST00000626028 DNAJB1P25685 340 aa24.72■■□□□ 1.55
SF1-220ENST00000626028 TFF2Q03403 129 aa24.72■■□□□ 1.55
SF1-220ENST00000626028 PUS10Q3MIT2 529 aaKnown RBP24.72■■□□□ 1.55
SF1-220ENST00000626028 LEXMQ3ZCV2 418 aa24.72■■□□□ 1.55
SF1-220ENST00000626028 MAEAQ7L5Y9 396 aa24.72■■□□□ 1.55
SF1-220ENST00000626028 MRPS27Q92552 414 aaKnown RBP24.72■■□□□ 1.55
SF1-220ENST00000626028 STK39Q9UEW8 545 aa24.72■■□□□ 1.55
SF1-220ENST00000626028 PP2D1A8MPX8 630 aa24.71■■□□□ 1.55
SF1-220ENST00000626028 INPPL1O15357 1258 aa24.71■■□□□ 1.55
SF1-220ENST00000626028 LONP1P36776 959 aaKnown RBP24.71■■□□□ 1.55
SF1-220ENST00000626028 MAPK6Q16659 721 aa24.71■■□□□ 1.55
SF1-220ENST00000626028 CTC1Q2NKJ3 1217 aa24.71■■□□□ 1.55
SF1-220ENST00000626028 SLC27A1Q6PCB7 646 aa24.71■■□□□ 1.55
SF1-220ENST00000626028 AGMOQ6ZNB7 445 aa24.71■■□□□ 1.55
SF1-220ENST00000626028 DEPTORQ8TB45 409 aa24.71■■□□□ 1.55
SF1-220ENST00000626028 DRC1Q96MC2 740 aa24.71■■□□□ 1.55
SF1-220ENST00000626028 ZSCAN16Q9H4T2 348 aaPredicted RBP24.71■■□□□ 1.55
SF1-220ENST00000626028 RSAD1Q9HA92 442 aa24.71■■□□□ 1.55
SF1-220ENST00000626028 CDC25AP30304 524 aa24.7■■□□□ 1.54
SF1-220ENST00000626028 LPPQ93052 612 aa24.7■■□□□ 1.54
SF1-220ENST00000626028 TRIM6Q9C030 488 aaPredicted RBP24.7■■□□□ 1.54
SF1-220ENST00000626028 TBC1D13Q9NVG8 400 aa24.7■■□□□ 1.54
SF1-220ENST00000626028 HCSTQ9UBK5 93 aa24.7■■□□□ 1.54
SF1-220ENST00000626028 MORC2Q9Y6X9 1032 aaPredicted RBP24.7■■□□□ 1.54
SF1-220ENST00000626028 E9PMD0 336 aa24.69■■□□□ 1.54
SF1-220ENST00000626028 ITGA4P13612 1032 aa24.69■■□□□ 1.54
SF1-220ENST00000626028 GUCY2CP25092 1073 aa24.69■■□□□ 1.54
SF1-220ENST00000626028 BCAR1P56945 870 aa24.69■■□□□ 1.54
SF1-220ENST00000626028 RNASELQ05823 741 aaKnown RBP24.69■■□□□ 1.54
SF1-220ENST00000626028 SF3A1Q15459 793 aaKnown RBP24.69■■□□□ 1.54
SF1-220ENST00000626028 SLC39A11Q8N1S5 342 aa24.69■■□□□ 1.54
SF1-220ENST00000626028 SMG8Q8ND04 991 aaKnown RBP24.69■■□□□ 1.54
SF1-220ENST00000626028 BSNDQ8WZ55 320 aa24.69■■□□□ 1.54
SF1-220ENST00000626028 CDK5RAP3Q96JB5 506 aa24.69■■□□□ 1.54
SF1-220ENST00000626028 CDCA3Q99618 268 aaPredicted RBP24.69■■□□□ 1.54
SF1-220ENST00000626028 CCDC113Q9H0I3 377 aa24.69■■□□□ 1.54
SF1-220ENST00000626028 NGRNQ9NPE2 291 aaKnown RBP24.69■■□□□ 1.54
SF1-220ENST00000626028 IPPQ9Y573 584 aa24.69■■□□□ 1.54
SF1-220ENST00000626028 BDP1A6H8Y1 2624 aa24.68■■□□□ 1.54
SF1-220ENST00000626028 ACKR2O00590 384 aa24.68■■□□□ 1.54
SF1-220ENST00000626028 HYAL1Q12794 435 aa24.68■■□□□ 1.54
SF1-220ENST00000626028 BMS1Q14692 1282 aaKnown RBP24.68■■□□□ 1.54
SF1-220ENST00000626028 RINT1Q6NUQ1 792 aa24.68■■□□□ 1.54
SF1-220ENST00000626028 C1orf186Q6ZWK4 172 aa24.68■■□□□ 1.54
SF1-220ENST00000626028 HSCBQ8IWL3 235 aa24.68■■□□□ 1.54
SF1-220ENST00000626028 SYT2Q8N9I0 419 aaPredicted RBP24.68■■□□□ 1.54
SF1-220ENST00000626028 ADAMTS19Q8TE59 1207 aa24.68■■□□□ 1.54
SF1-220ENST00000626028 CALML4Q96GE6 196 aa24.68■■□□□ 1.54
SF1-220ENST00000626028 CPB2Q96IY4 423 aa24.68■■□□□ 1.54
SF1-220ENST00000626028 GIT1Q9Y2X7 761 aa24.68■■□□□ 1.54
SF1-220ENST00000626028 RBM19Q9Y4C8 960 aaKnown RBP24.68■■□□□ 1.54
SF1-220ENST00000626028 TRIP11Q15643 1979 aa24.67■■□□□ 1.54
SF1-220ENST00000626028 MEIS3P2A8K0S8 358 aa24.67■■□□□ 1.54
SF1-220ENST00000626028 FSCN2O14926 492 aa24.67■■□□□ 1.54
SF1-220ENST00000626028 N4BP3O15049 544 aa24.67■■□□□ 1.54
SF1-220ENST00000626028 STX6O43752 255 aa24.67■■□□□ 1.54
SF1-220ENST00000626028 KCNA5P22460 613 aa24.67■■□□□ 1.54
SF1-220ENST00000626028 UBA7P41226 1012 aa24.67■■□□□ 1.54
SF1-220ENST00000626028 RESTQ13127 1097 aa24.67■■□□□ 1.54
SF1-220ENST00000626028 PRPF4BQ13523 1007 aaKnown RBP24.67■■□□□ 1.54
SF1-220ENST00000626028 TMEM119Q4V9L6 283 aa24.67■■□□□ 1.54
SF1-220ENST00000626028 CABP7Q86V35 215 aa24.67■■□□□ 1.54
SF1-220ENST00000626028 EFHBQ8N7U6 833 aa24.67■■□□□ 1.54
SF1-220ENST00000626028 TMEM169Q96HH4 297 aa24.67■■□□□ 1.54
SF1-220ENST00000626028 TMEM175Q9BSA9 504 aa24.67■■□□□ 1.54
SF1-220ENST00000626028 EIF2AQ9BY44 585 aaKnown RBP24.67■■□□□ 1.54
SF1-220ENST00000626028 NRDE2Q9H7Z3 1164 aa24.67■■□□□ 1.54
SF1-220ENST00000626028 FAM50BQ9Y247 325 aa24.67■■□□□ 1.54
SF1-220ENST00000626028 INPP5FQ9Y2H2 1132 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms