RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 CYFIP1Q7L576 1253 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 RMDN1Q96DB5 314 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 PRIMPOLQ96LW4 560 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 ZWILCHQ9H900 591 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 KCND2Q9NZV8 630 aa11.83□□□□□ -0.52
VPS8-227ENST00000625842 SH2B2O14492 632 aaPredicted RBP11.82□□□□□ -0.52
VPS8-227ENST00000625842 CKMP06732 381 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 BACE1P56817 501 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 AP1B1Q10567 949 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 PPP1R13BQ96KQ4 1090 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 SPZ1Q9BXG8 430 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 TRIM31Q9BZY9 425 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 AGO2Q9UKV8 859 aaKnown RBP11.82□□□□□ -0.52
VPS8-227ENST00000625842 ZCCHC11Q5TAX3 1644 aaKnown RBP11.82□□□□□ -0.52
VPS8-227ENST00000625842 TTC36A6NLP5 189 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 CAMTA2O94983 1202 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 BRAFP15056 766 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 GEMIN4P57678 1058 aaKnown RBP11.82□□□□□ -0.52
VPS8-227ENST00000625842 TMTC3Q6ZXV5 915 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.82□□□□□ -0.52
VPS8-227ENST00000625842 TRAIPQ9BWF2 469 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 PCDHGB4Q9UN71 923 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 ORC6Q9Y5N6 252 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 KRIT1O00522 736 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 MX2P20592 715 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 GARTP22102 1010 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 POLD3Q15054 466 aaPredicted RBP11.82□□□□□ -0.52
VPS8-227ENST00000625842 ZSCAN23Q3MJ62 389 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 NAALADL2Q58DX5 795 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 PCGF5Q86SE9 256 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 GPD1LQ8N335 351 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 GIPC2Q8TF65 315 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 DNAJC7Q99615 494 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 MUC3BQ9H195 1237 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 RABEP2Q9H5N1 569 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 VTA1Q9NP79 307 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 PIH1D3Q9NQM4 214 aaKnown RBP11.82□□□□□ -0.52
VPS8-227ENST00000625842 GIMAP4Q9NUV9 329 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 SENP1Q9P0U3 644 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 SUN2Q9UH99 717 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 NDUFS2O75306 463 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 SKP1P63208 163 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 PRAMEP78395 509 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 PDIA6Q15084 440 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 KRBA2Q6ZNG9 492 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 ZNF438Q7Z4V0 828 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 KDM4CQ9H3R0 1056 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 SMYD2Q9NRG4 433 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 STAP2Q9UGK3 403 aa11.82□□□□□ -0.52
VPS8-227ENST00000625842 TBX3O15119 743 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 PER1O15534 1290 aaPredicted RBP11.81□□□□□ -0.52
VPS8-227ENST00000625842 PRAMEF18Q5VWM3 479 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 CDC42EP5Q6NZY7 148 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.81□□□□□ -0.52
VPS8-227ENST00000625842 SCUBE2Q9NQ36 999 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 PRG3Q9Y2Y8 225 aaPredicted RBP11.81□□□□□ -0.52
VPS8-227ENST00000625842 ARHGAP10A1A4S6 786 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 FAM196BA6NMK8 535 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 M0QYV0 167 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 KRT7P08729 469 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 PPIGQ13427 754 aaKnown RBP eCLIP11.81□□□□□ -0.522e-7■■■■□ 19.5
VPS8-227ENST00000625842 CDH18Q13634 790 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 MESDQ14696 234 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 DEFB128Q7Z7B8 93 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 ZNF34Q8IZ26 560 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 KIRREL3Q8IZU9 778 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 ATP6V0D2Q8N8Y2 350 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 NSUN7Q8NE18 718 aaKnown RBP11.81□□□□□ -0.52
VPS8-227ENST00000625842 RBAKQ9NYW8 714 aaPredicted RBP11.81□□□□□ -0.52
VPS8-227ENST00000625842 GCNT4Q9P109 453 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 WDR35Q9P2L0 1181 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 RHOBTB3O94955 611 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 CPA1P15085 419 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 PPM1LQ5SGD2 360 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 PHLDB2Q86SQ0 1253 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 MFN1Q8IWA4 741 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 RHOT2Q8IXI1 618 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 MAP4K1Q92918 833 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 GDAP1L1Q96MZ0 367 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 ZSWIM6Q9HCJ5 1215 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 WDR19Q8NEZ3 1342 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 MED14O60244 1454 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 PPP1R12AO14974 1030 aaPredicted RBP11.81□□□□□ -0.52
VPS8-227ENST00000625842 CREB3O43889 395 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 HIRAP54198 1017 aaPredicted RBP11.81□□□□□ -0.52
VPS8-227ENST00000625842 CXCL9Q07325 125 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 CEP85LQ5SZL2 805 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 ACRBPQ8NEB7 543 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 LRRC37BQ96QE4 947 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 ADAM22Q9P0K1 906 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 MRFAP1Q9Y605 127 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 TULP4Q9NRJ4 1543 aa11.81□□□□□ -0.52
VPS8-227ENST00000625842 KANSL1LA0AUZ9 987 aa11.8□□□□□ -0.52
VPS8-227ENST00000625842 CCDC160A6NGH7 325 aa11.8□□□□□ -0.52
VPS8-227ENST00000625842 PFKFB1P16118 471 aa11.8□□□□□ -0.52
VPS8-227ENST00000625842 TAF6P49848 677 aa11.8□□□□□ -0.52
VPS8-227ENST00000625842 VSIG1Q86XK7 387 aa11.8□□□□□ -0.52
VPS8-227ENST00000625842 KLHL7Q8IXQ5 586 aa11.8□□□□□ -0.52
VPS8-227ENST00000625842 BANK1Q8NDB2 785 aa11.8□□□□□ -0.52
VPS8-227ENST00000625842 CDC26Q8NHZ8 85 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms