RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 TDRD5Q8NAT2 981 aaKnown RBP12.39□□□□□ -0.43
DDX41-218ENST00000625286 DAGLBQ8NCG7 672 aa12.39□□□□□ -0.43
DDX41-218ENST00000625286 HAS1Q92839 578 aa12.39□□□□□ -0.43
DDX41-218ENST00000625286 RNF39Q9H2S5 420 aa12.39□□□□□ -0.43
DDX41-218ENST00000625286 DHX33Q9H6R0 707 aaKnown RBP12.39□□□□□ -0.43
DDX41-218ENST00000625286 ZSWIM6Q9HCJ5 1215 aa12.39□□□□□ -0.43
DDX41-218ENST00000625286 KCNMB3Q9NPA1 279 aa12.39□□□□□ -0.43
DDX41-218ENST00000625286 GJB4Q9NTQ9 266 aa12.39□□□□□ -0.43
DDX41-218ENST00000625286 AGPAT5Q9NUQ2 364 aa12.39□□□□□ -0.43
DDX41-218ENST00000625286 DZANK1Q9NVP4 752 aa12.39□□□□□ -0.43
DDX41-218ENST00000625286 MARCH5Q9NX47 278 aa12.39□□□□□ -0.43
DDX41-218ENST00000625286 MIOSQ9NXC5 875 aa12.39□□□□□ -0.43
DDX41-218ENST00000625286 KCNJ14Q9UNX9 436 aa12.39□□□□□ -0.43
DDX41-218ENST00000625286 DMXL1Q9Y485 3027 aa12.38□□□□□ -0.43
DDX41-218ENST00000625286 DNAH14Q0VDD8 3507 aa12.38□□□□□ -0.43
DDX41-218ENST00000625286 NRP1O14786 923 aa12.38□□□□□ -0.43
DDX41-218ENST00000625286 POMCP01189 267 aa12.38□□□□□ -0.43
DDX41-218ENST00000625286 SRGAP2CP0DJJ0 459 aa12.38□□□□□ -0.43
DDX41-218ENST00000625286 MYBP10242 640 aa12.38□□□□□ -0.43
DDX41-218ENST00000625286 SKIP12755 728 aa12.38□□□□□ -0.43
DDX41-218ENST00000625286 RNASELQ05823 741 aaKnown RBP12.38□□□□□ -0.43
DDX41-218ENST00000625286 SSRP1Q08945 709 aaKnown RBP12.38□□□□□ -0.43
DDX41-218ENST00000625286 LAMTOR4Q0VGL1 99 aa12.38□□□□□ -0.43
DDX41-218ENST00000625286 PPP2R5CQ13362 524 aa12.38□□□□□ -0.43
DDX41-218ENST00000625286 EARS2Q5JPH6 523 aaKnown RBP12.38□□□□□ -0.43
DDX41-218ENST00000625286 MOXD1Q6UVY6 613 aa12.38□□□□□ -0.43
DDX41-218ENST00000625286 RUFY3Q7L099 469 aa12.38□□□□□ -0.43
DDX41-218ENST00000625286 FRMD5Q7Z6J6 570 aa12.38□□□□□ -0.43
DDX41-218ENST00000625286 RNF168Q8IYW5 571 aaPredicted RBP12.38□□□□□ -0.43
DDX41-218ENST00000625286 OXER1Q8TDS5 423 aa12.38□□□□□ -0.43
DDX41-218ENST00000625286 RSAD2Q8WXG1 361 aa12.38□□□□□ -0.43
DDX41-218ENST00000625286 INO80BQ9C086 356 aaPredicted RBP12.38□□□□□ -0.43
DDX41-218ENST00000625286 KCNK12Q9HB15 430 aa12.38□□□□□ -0.43
DDX41-218ENST00000625286 BMP2KQ9NSY1 1161 aaPredicted RBP12.38□□□□□ -0.43
DDX41-218ENST00000625286 DDX25Q9UHL0 483 aaKnown RBP12.38□□□□□ -0.43
DDX41-218ENST00000625286 COL4A3BPQ9Y5P4 624 aa12.38□□□□□ -0.43
DDX41-218ENST00000625286 PRR23AA6NEV1 266 aa12.37□□□□□ -0.43
DDX41-218ENST00000625286 NARSO43776 548 aaKnown RBP12.37□□□□□ -0.43
DDX41-218ENST00000625286 KLRC2P26717 231 aa12.37□□□□□ -0.43
DDX41-218ENST00000625286 QARSP47897 775 aaKnown RBP12.37□□□□□ -0.43
DDX41-218ENST00000625286 RAB27AP51159 221 aa12.37□□□□□ -0.43
DDX41-218ENST00000625286 CLCN5P51795 746 aa12.37□□□□□ -0.43
DDX41-218ENST00000625286 SPIRE1Q08AE8 756 aa12.37□□□□□ -0.43
DDX41-218ENST00000625286 STK3Q13188 491 aa12.37□□□□□ -0.43
DDX41-218ENST00000625286 GIT2Q14161 759 aa12.37□□□□□ -0.43
DDX41-218ENST00000625286 LETM2Q2VYF4 491 aa12.37□□□□□ -0.43
DDX41-218ENST00000625286 COLGALT2Q8IYK4 626 aa12.37□□□□□ -0.43
DDX41-218ENST00000625286 PLCD3Q8N3E9 789 aa12.37□□□□□ -0.43
DDX41-218ENST00000625286 EIF2AQ9BY44 585 aaKnown RBP12.37□□□□□ -0.43
DDX41-218ENST00000625286 IRF2BPLQ9H1B7 796 aa12.37□□□□□ -0.43
DDX41-218ENST00000625286 SFXN1Q9H9B4 322 aa12.37□□□□□ -0.43
DDX41-218ENST00000625286 RGL1Q9NZL6 768 aa12.37□□□□□ -0.43
DDX41-218ENST00000625286 FAN1Q9Y2M0 1017 aa12.37□□□□□ -0.43
DDX41-218ENST00000625286 HES2Q9Y543 173 aa12.37□□□□□ -0.43
DDX41-218ENST00000625286 FAM205CA6NFA0 338 aa12.36□□□□□ -0.43
DDX41-218ENST00000625286 C2CD2LO14523 706 aa12.36□□□□□ -0.43
DDX41-218ENST00000625286 TEX28O15482 410 aa12.36□□□□□ -0.43
DDX41-218ENST00000625286 DEXIO95424 95 aa12.36□□□□□ -0.43
DDX41-218ENST00000625286 ALDH2P05091 517 aa12.36□□□□□ -0.43
DDX41-218ENST00000625286 SPATA31D3P0C874 917 aa12.36□□□□□ -0.43
DDX41-218ENST00000625286 NCLP19338 710 aaKnown RBP12.36□□□□□ -0.43
DDX41-218ENST00000625286 PSMA5P28066 241 aa12.36□□□□□ -0.43
DDX41-218ENST00000625286 BMS1Q14692 1282 aaKnown RBP12.36□□□□□ -0.43
DDX41-218ENST00000625286 NONOQ15233 471 aaKnown RBP eCLIP12.36□□□□□ -0.43
DDX41-218ENST00000625286 KIAA0319Q5VV43 1072 aa12.36□□□□□ -0.43
DDX41-218ENST00000625286 SPATA31D4Q6ZUB0 917 aa12.36□□□□□ -0.43
DDX41-218ENST00000625286 SRGAP1Q7Z6B7 1085 aa12.36□□□□□ -0.43
DDX41-218ENST00000625286 GSTCDQ8NEC7 633 aa12.36□□□□□ -0.43
DDX41-218ENST00000625286 FLCNQ8NFG4 579 aa12.36□□□□□ -0.43
DDX41-218ENST00000625286 RSPH1Q8WYR4 309 aa12.36□□□□□ -0.43
DDX41-218ENST00000625286 PGBD4Q96DM1 585 aa12.36□□□□□ -0.43
DDX41-218ENST00000625286 ZNF274Q96GC6 653 aaPredicted RBP12.36□□□□□ -0.43
DDX41-218ENST00000625286 CEP170P1Q96L14 293 aa12.36□□□□□ -0.43
DDX41-218ENST00000625286 B3GALT6Q96L58 329 aa12.36□□□□□ -0.43
DDX41-218ENST00000625286 TMEM175Q9BSA9 504 aa12.36□□□□□ -0.43
DDX41-218ENST00000625286 PHF20Q9BVI0 1012 aa12.36□□□□□ -0.43
DDX41-218ENST00000625286 RSAD1Q9HA92 442 aa12.36□□□□□ -0.43
DDX41-218ENST00000625286 XPNPEP1Q9NQW7 623 aa12.36□□□□□ -0.43
DDX41-218ENST00000625286 MTCL1Q9Y4B5 1905 aaKnown RBP12.36□□□□□ -0.43
DDX41-218ENST00000625286 ARID2Q68CP9 1835 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 KRBA1A5PL33 1030 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 INPPL1O15357 1258 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 TSPAN1O60635 241 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 RFPL2O75678 378 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 SOD2P04179 222 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 P4HBP07237 508 aaKnown RBP12.35□□□□□ -0.43
DDX41-218ENST00000625286 AOC1P19801 751 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 DSC1Q08554 894 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 TDGQ13569 410 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 CTTNQ14247 550 aaKnown RBP12.35□□□□□ -0.43
DDX41-218ENST00000625286 AMHR2Q16671 573 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 PPP4R3AQ6IN85 833 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 FERMT3Q86UX7 667 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 PPFIBP1Q86W92 1011 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 TRIM22Q8IYM9 498 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 TMEM87AQ8NBN3 555 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 ST13P5Q8NFI4 369 aaPredicted RBP12.35□□□□□ -0.43
DDX41-218ENST00000625286 ZNF707Q96C28 371 aaPredicted RBP12.35□□□□□ -0.43
DDX41-218ENST00000625286 DYDC2Q96IM9 177 aa12.35□□□□□ -0.43
DDX41-218ENST00000625286 CPB2Q96IY4 423 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms