RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 CNKSR1Q969H4 720 aa16.43■□□□□ 0.22
LINC00552-201ENST00000625151 SEC16BQ96JE7 1060 aa16.43■□□□□ 0.22
LINC00552-201ENST00000625151 TDRD3Q9H7E2 651 aaKnown RBP16.43■□□□□ 0.22
LINC00552-201ENST00000625151 GOPCQ9HD26 462 aa16.43■□□□□ 0.22
LINC00552-201ENST00000625151 PNMA2Q9UL42 364 aa16.43■□□□□ 0.22
LINC00552-201ENST00000625151 C5orf60A6NFR6 353 aa16.42■□□□□ 0.22
LINC00552-201ENST00000625151 KIAA0391O15091 583 aaKnown RBP16.42■□□□□ 0.22
LINC00552-201ENST00000625151 HIP1RO75146 1068 aa16.42■□□□□ 0.22
LINC00552-201ENST00000625151 KRT13P13646 458 aa16.42■□□□□ 0.22
LINC00552-201ENST00000625151 MNAT1P51948 309 aa16.42■□□□□ 0.22
LINC00552-201ENST00000625151 EIF3BP55884 814 aaKnown RBP16.42■□□□□ 0.22
LINC00552-201ENST00000625151 SPDYCQ5MJ68 293 aa16.42■□□□□ 0.22
LINC00552-201ENST00000625151 FBXO25Q8TCJ0 367 aa16.42■□□□□ 0.22
LINC00552-201ENST00000625151 CEP89Q96ST8 783 aa16.42■□□□□ 0.22
LINC00552-201ENST00000625151 STRA6Q9BX79 667 aa16.42■□□□□ 0.22
LINC00552-201ENST00000625151 OSBPL7Q9BZF2 842 aa16.42■□□□□ 0.22
LINC00552-201ENST00000625151 UBE2TQ9NPD8 197 aaPredicted RBP16.42■□□□□ 0.22
LINC00552-201ENST00000625151 CHORDC1Q9UHD1 332 aaPredicted RBP16.42■□□□□ 0.22
LINC00552-201ENST00000625151 FAM187AA6NFU0 413 aa16.42■□□□□ 0.22
LINC00552-201ENST00000625151 PHF20L1A8MW92 1017 aa16.42■□□□□ 0.22
LINC00552-201ENST00000625151 DHX34Q14147 1143 aaKnown RBP16.42■□□□□ 0.22
LINC00552-201ENST00000625151 PPP2R5EQ16537 467 aa16.42■□□□□ 0.22
LINC00552-201ENST00000625151 UBAP2Q5T6F2 1119 aaKnown RBP16.42■□□□□ 0.22
LINC00552-201ENST00000625151 STRIP1Q5VSL9 837 aa16.42■□□□□ 0.22
LINC00552-201ENST00000625151 CCDC121Q6ZUS5 278 aa16.42■□□□□ 0.22
LINC00552-201ENST00000625151 ZDHHC14Q8IZN3 488 aa16.42■□□□□ 0.22
LINC00552-201ENST00000625151 TATDN2Q93075 761 aa16.42■□□□□ 0.22
LINC00552-201ENST00000625151 LXNQ9BS40 222 aa16.42■□□□□ 0.22
LINC00552-201ENST00000625151 ZNF577Q9BSK1 485 aa16.42■□□□□ 0.22
LINC00552-201ENST00000625151 PCIF1Q9H4Z3 704 aa16.42■□□□□ 0.22
LINC00552-201ENST00000625151 CTTNBP2NLQ9P2B4 639 aa16.42■□□□□ 0.22
LINC00552-201ENST00000625151 EMSYQ7Z589 1322 aa16.42■□□□□ 0.22
LINC00552-201ENST00000625151 TMEM110-MUSTN1A8MSY1 372 aa16.41■□□□□ 0.22
LINC00552-201ENST00000625151 NPM3O75607 178 aaKnown RBP16.41■□□□□ 0.22
LINC00552-201ENST00000625151 FTLP02792 175 aaPredicted RBP16.41■□□□□ 0.22
LINC00552-201ENST00000625151 POLR2MP0CAP2 368 aa16.41■□□□□ 0.22
LINC00552-201ENST00000625151 PTGIRP43119 386 aa16.41■□□□□ 0.22
LINC00552-201ENST00000625151 PMS2P54278 862 aa16.41■□□□□ 0.22
LINC00552-201ENST00000625151 CEP55Q53EZ4 464 aa16.41■□□□□ 0.22
LINC00552-201ENST00000625151 SWT1Q5T5J6 900 aaKnown RBP16.41■□□□□ 0.22
LINC00552-201ENST00000625151 CHADLQ6NUI6 762 aa16.41■□□□□ 0.22
LINC00552-201ENST00000625151 ZNF746Q6NUN9 644 aaPredicted RBP16.41■□□□□ 0.22
LINC00552-201ENST00000625151 MAEAQ7L5Y9 396 aa16.41■□□□□ 0.22
LINC00552-201ENST00000625151 SLC9A9Q8IVB4 645 aa16.41■□□□□ 0.22
LINC00552-201ENST00000625151 FMNL3Q8IVF7 1028 aa16.41■□□□□ 0.22
LINC00552-201ENST00000625151 RHOT2Q8IXI1 618 aa16.41■□□□□ 0.22
LINC00552-201ENST00000625151 RNF25Q96BH1 459 aaPredicted RBP16.41■□□□□ 0.22
LINC00552-201ENST00000625151 ZNFX1Q9P2E3 1918 aaKnown RBP16.41■□□□□ 0.22
LINC00552-201ENST00000625151 ATRNL1Q5VV63 1379 aa16.41■□□□□ 0.22
LINC00552-201ENST00000625151 SYNGAP1Q96PV0 1343 aa16.41■□□□□ 0.22
LINC00552-201ENST00000625151 NUDT17P0C025 328 aa16.41■□□□□ 0.22
LINC00552-201ENST00000625151 USP8P40818 1118 aa16.41■□□□□ 0.22
LINC00552-201ENST00000625151 HADHBP55084 474 aaKnown RBP16.41■□□□□ 0.22
LINC00552-201ENST00000625151 PPP3CAQ08209 521 aa16.41■□□□□ 0.22
LINC00552-201ENST00000625151 PRELID2Q8N945 189 aa16.41■□□□□ 0.22
LINC00552-201ENST00000625151 ACER1Q8TDN7 264 aa16.41■□□□□ 0.22
LINC00552-201ENST00000625151 PABPC3Q9H361 631 aaKnown RBP16.41■□□□□ 0.22
LINC00552-201ENST00000625151 GRHL1Q9NZI5 618 aa16.41■□□□□ 0.22
LINC00552-201ENST00000625151 KCND2Q9NZV8 630 aa16.41■□□□□ 0.22
LINC00552-201ENST00000625151 ARHGEF35A5YM69 484 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 K7ENM7 598 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 ECE2O60344 883 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 PHF2O75151 1096 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 BCRP11274 1271 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 PSEN1P49768 467 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 DRP2Q13474 957 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 C11orf63Q6NUN7 778 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 TTC27Q6P3X3 843 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 HOOK3Q86VS8 718 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 NEK9Q8TD19 979 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 CSRNP1Q96S65 589 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 TMX4Q9H1E5 349 aaPredicted RBP16.4■□□□□ 0.22
LINC00552-201ENST00000625151 RPTORQ8N122 1335 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 DDX39AO00148 427 aaKnown RBP16.4■□□□□ 0.22
LINC00552-201ENST00000625151 DNM1LO00429 736 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 DRD4P21917 467 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 MUTP22033 750 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 RFX1P22670 979 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 PLCB4Q15147 1175 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 AOC3Q16853 763 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 ERMARDQ5T6L9 678 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 B3GNT9Q6UX72 402 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 RPUSD2Q8IZ73 545 aaKnown RBP16.4■□□□□ 0.22
LINC00552-201ENST00000625151 ZSWIM2Q8NEG5 633 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 KAT5Q92993 513 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 ZSWIM1Q9BR11 485 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 CNOT10Q9H9A5 744 aaKnown RBP16.4■□□□□ 0.22
LINC00552-201ENST00000625151 SERPINA10Q9UK55 444 aa16.4■□□□□ 0.22
LINC00552-201ENST00000625151 ATMINO43313 823 aaPredicted RBP16.39■□□□□ 0.22
LINC00552-201ENST00000625151 VIL1P09327 827 aaKnown RBP16.39■□□□□ 0.22
LINC00552-201ENST00000625151 RPL21P46778 160 aaKnown RBP16.39■□□□□ 0.22
LINC00552-201ENST00000625151 GCLMP48507 274 aa16.39■□□□□ 0.22
LINC00552-201ENST00000625151 SMTNP53814 917 aa16.39■□□□□ 0.22
LINC00552-201ENST00000625151 DENND2CQ68D51 928 aa16.39■□□□□ 0.22
LINC00552-201ENST00000625151 CACNA2D3Q8IZS8 1091 aa16.39■□□□□ 0.22
LINC00552-201ENST00000625151 XPO6Q96QU8 1125 aaKnown RBP16.39■□□□□ 0.22
LINC00552-201ENST00000625151 WDR11Q9BZH6 1224 aa16.39■□□□□ 0.22
LINC00552-201ENST00000625151 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.39■□□□□ 0.22
LINC00552-201ENST00000625151 RASAL2Q9UJF2 1139 aa16.39■□□□□ 0.22
LINC00552-201ENST00000625151 GOLGA6L7A0A1B0GV03 622 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms