RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.62□□□□□ -0.39
ATRX-214ENST00000624166 XXYLT1Q8NBI6 393 aa12.62□□□□□ -0.39
ATRX-214ENST00000624166 KIAA0895Q8NCT3 520 aa12.62□□□□□ -0.39
ATRX-214ENST00000624166 MAGEC3Q8TD91 643 aa12.62□□□□□ -0.39
ATRX-214ENST00000624166 C1orf54Q8WWF1 131 aa12.62□□□□□ -0.39
ATRX-214ENST00000624166 NAF1Q96HR8 494 aaKnown RBP12.62□□□□□ -0.39
ATRX-214ENST00000624166 TRABDQ9H4I3 376 aa12.62□□□□□ -0.39
ATRX-214ENST00000624166 TMEM94Q12767 1356 aa12.62□□□□□ -0.39
ATRX-214ENST00000624166 BRD2P25440 801 aaKnown RBP12.62□□□□□ -0.39
ATRX-214ENST00000624166 FMO5P49326 533 aa12.62□□□□□ -0.39
ATRX-214ENST00000624166 PTENP60484 403 aa12.62□□□□□ -0.39
ATRX-214ENST00000624166 MKNK1Q9BUB5 465 aa12.62□□□□□ -0.39
ATRX-214ENST00000624166 NUF2Q9BZD4 464 aa12.62□□□□□ -0.39
ATRX-214ENST00000624166 NDE1Q9NXR1 346 aa12.62□□□□□ -0.39
ATRX-214ENST00000624166 DCTN4Q9UJW0 460 aa12.62□□□□□ -0.39
ATRX-214ENST00000624166 TNS3Q68CZ2 1445 aa12.61□□□□□ -0.39
ATRX-214ENST00000624166 RNF8O76064 485 aa12.61□□□□□ -0.39
ATRX-214ENST00000624166 PAX7P23759 505 aa12.61□□□□□ -0.39
ATRX-214ENST00000624166 PSMC4P43686 418 aa12.61□□□□□ -0.39
ATRX-214ENST00000624166 FBXO25Q8TCJ0 367 aa12.61□□□□□ -0.39
ATRX-214ENST00000624166 MAML1Q92585 1016 aa12.61□□□□□ -0.39
ATRX-214ENST00000624166 THRAP3Q9Y2W1 955 aaKnown RBP12.61□□□□□ -0.39
ATRX-214ENST00000624166 CFAP69A5D8W1 941 aa12.61□□□□□ -0.39
ATRX-214ENST00000624166 CTCFP49711 727 aaPredicted RBP12.61□□□□□ -0.39
ATRX-214ENST00000624166 LIG4P49917 911 aa12.61□□□□□ -0.39
ATRX-214ENST00000624166 SNX16P57768 344 aa12.61□□□□□ -0.39
ATRX-214ENST00000624166 CTTNQ14247 550 aaKnown RBP12.61□□□□□ -0.39
ATRX-214ENST00000624166 BBS9Q3SYG4 887 aa12.61□□□□□ -0.39
ATRX-214ENST00000624166 CASC4Q6P4E1 433 aa12.61□□□□□ -0.39
ATRX-214ENST00000624166 DPH6Q7L8W6 267 aa12.61□□□□□ -0.39
ATRX-214ENST00000624166 KIF9Q9HAQ2 790 aa12.61□□□□□ -0.39
ATRX-214ENST00000624166 RXFP1Q9HBX9 757 aa12.61□□□□□ -0.39
ATRX-214ENST00000624166 PPARGC1AQ9UBK2 798 aaKnown RBP12.61□□□□□ -0.39
ATRX-214ENST00000624166 EYA4O95677 639 aa12.61□□□□□ -0.39
ATRX-214ENST00000624166 COILP38432 576 aaPredicted RBP12.61□□□□□ -0.39
ATRX-214ENST00000624166 TCP10Q12799 353 aa12.61□□□□□ -0.39
ATRX-214ENST00000624166 TTBK2Q6IQ55 1244 aa12.61□□□□□ -0.39
ATRX-214ENST00000624166 AFAP1L2Q8N4X5 818 aa12.61□□□□□ -0.39
ATRX-214ENST00000624166 ATXN2LQ8WWM7 1075 aaKnown RBP12.61□□□□□ -0.39
ATRX-214ENST00000624166 PCDHB4Q9Y5E5 795 aa12.61□□□□□ -0.39
ATRX-214ENST00000624166 FAM205AQ6ZU69 1335 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 KRT37O76014 449 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 SLC1A1P43005 524 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 GCLMP48507 274 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 VAMP7P51809 220 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 ZNF746Q6NUN9 644 aaPredicted RBP12.6□□□□□ -0.39
ATRX-214ENST00000624166 CRLF3Q8IUI8 442 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 RIOK1Q9BRS2 568 aaKnown RBP12.6□□□□□ -0.39
ATRX-214ENST00000624166 USP17L15C9J2P7 530 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 USP17L13C9JLJ4 530 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 USP17L11C9JVI0 530 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 USP17L18D6R9N7 530 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 USP17L22D6RA61 530 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 USP17L17D6RBQ6 530 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 USP17L19D6RCP7 530 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 USP17L20D6RJB6 530 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 MYCNP04198 464 aaPredicted RBP12.6□□□□□ -0.39
ATRX-214ENST00000624166 ACADSP16219 412 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 VHLP40337 213 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 USP17L24Q0WX57 530 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 BRDTQ58F21 947 aaPredicted RBP12.6□□□□□ -0.39
ATRX-214ENST00000624166 USP17L6PQ6QN14 398 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 PIGOQ8TEQ8 1089 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 TEKT4Q8WW24 435 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 CDKL2Q92772 493 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 TTC17Q96AE7 1141 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 HEMGNQ9BXL5 484 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 ANKFY1Q9P2R3 1169 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 MAD2L2Q9UI95 211 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 MCM8Q9UJA3 840 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 KLRC4O43908 158 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 TRIM49P0CI25 452 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 TRIM49CP0CI26 452 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 MYBL1P10243 752 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 PIK3CAP42336 1068 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 ERMARDQ5T6L9 678 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 ZNF571Q7Z3V5 609 aaPredicted RBP12.6□□□□□ -0.39
ATRX-214ENST00000624166 RHOT1Q8IXI2 618 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 KCTD17Q8N5Z5 321 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 MAGEB18Q96M61 343 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 FAM161BQ96MY7 647 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 CYTH2Q99418 400 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 SLAIN2Q9P270 581 aa12.6□□□□□ -0.39
ATRX-214ENST00000624166 MCF2LO15068 1137 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 GSTA2P09210 222 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 MYCLP12524 364 aaPredicted RBP12.59□□□□□ -0.39
ATRX-214ENST00000624166 PON1P27169 355 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 KYNUQ16719 465 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 C1orf146Q5VVC0 180 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 DNAJC24Q6P3W2 148 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 IRF2BP1Q8IU81 584 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 EPS8L3Q8TE67 593 aaKnown RBP12.59□□□□□ -0.39
ATRX-214ENST00000624166 PURBQ96QR8 312 aaKnown RBP12.59□□□□□ -0.39
ATRX-214ENST00000624166 RPS6KC1Q96S38 1066 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 COPEO14579 308 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 HNRNPDLO14979 420 aaKnown RBP12.59□□□□□ -0.39
ATRX-214ENST00000624166 TBX3O15119 743 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 DBN1Q16643 649 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 MIIPQ5JXC2 388 aa12.59□□□□□ -0.39
ATRX-214ENST00000624166 NLRX1Q86UT6 975 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms