RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 NAF1Q96HR8 494 aaKnown RBP15.18■□□□□ 0.02
LDB3-209ENST00000623056 CRAMP1Q96RY5 1269 aa15.18■□□□□ 0.02
LDB3-209ENST00000623056 TRIM7Q9C029 511 aa15.18■□□□□ 0.02
LDB3-209ENST00000623056 TAOK3Q9H2K8 898 aa15.18■□□□□ 0.02
LDB3-209ENST00000623056 JMJD4Q9H9V9 463 aa15.18■□□□□ 0.02
LDB3-209ENST00000623056 KCNK9Q9NPC2 374 aa15.18■□□□□ 0.02
LDB3-209ENST00000623056 ZFATQ9P243 1243 aa15.18■□□□□ 0.02
LDB3-209ENST00000623056 PTPN22Q9Y2R2 807 aa15.18■□□□□ 0.02
LDB3-209ENST00000623056 PNMA6FA0A0J9YX94 578 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 FOXO6A8MYZ6 492 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 MIF4GDA9UHW6 222 aaKnown RBP15.17■□□□□ 0.02
LDB3-209ENST00000623056 MEIS1O00470 390 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 SLC26A4O43511 780 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 GH1P01241 217 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 TNFAIP3P21580 790 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 SKIV2L2P42285 1042 aaKnown RBP15.17■□□□□ 0.02
LDB3-209ENST00000623056 EGFL6Q8IUX8 553 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 CCDC105Q8IYK2 499 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 SPDYE1Q8NFV5 336 aaPredicted RBP15.17■□□□□ 0.02
LDB3-209ENST00000623056 WDR66Q8TBY9 1149 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 PARD3BQ8TEW8 1205 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 UTP4Q969X6 686 aaKnown RBP15.17■□□□□ 0.02
LDB3-209ENST00000623056 BORCS6Q96GS4 357 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 ANKRD27Q96NW4 1050 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 SERPINB12Q96P63 405 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 ZSWIM1Q9BR11 485 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 OSBPL1AQ9BXW6 950 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 CDC42EP4Q9H3Q1 356 aaKnown RBP15.17■□□□□ 0.02
LDB3-209ENST00000623056 USP40Q9NVE5 1235 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 IRS2Q9Y4H2 1338 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 NHSQ6T4R5 1651 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 EIF4E1BA6NMX2 242 aaKnown RBP15.17■□□□□ 0.02
LDB3-209ENST00000623056 TMEM110-MUSTN1A8MSY1 372 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 UNC5CO95185 931 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 ACSL3O95573 720 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 KCNA1Q09470 495 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 MPP2Q14168 576 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 RRP1BQ14684 758 aaKnown RBP15.17■□□□□ 0.02
LDB3-209ENST00000623056 BMT2Q1RMZ1 405 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 RNF43Q68DV7 783 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 C11orf63Q6NUN7 778 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 BICDL1Q6ZP65 573 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 CYFIP1Q7L576 1253 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 MAEAQ7L5Y9 396 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 CATSPER3Q86XQ3 398 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 ZBTB10Q96DT7 871 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 RAB3IPQ96QF0 476 aaPredicted RBP15.17■□□□□ 0.02
LDB3-209ENST00000623056 TGS1Q96RS0 853 aaKnown RBP15.17■□□□□ 0.02
LDB3-209ENST00000623056 RTFDC1Q9BY42 306 aaPredicted RBP15.17■□□□□ 0.02
LDB3-209ENST00000623056 BCAS3Q9H6U6 928 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 ETNK1Q9HBU6 452 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 CTNNAL1Q9UBT7 734 aa15.17■□□□□ 0.02
LDB3-209ENST00000623056 NKX1-2Q9UD57 310 aaPredicted RBP15.17■□□□□ 0.02
LDB3-209ENST00000623056 COL5A3P25940 1745 aaPredicted RBP15.16■□□□□ 0.02
LDB3-209ENST00000623056 TCRBV7S2A1N4TA0A589 114 aa15.16■□□□□ 0.02
LDB3-209ENST00000623056 RSPH10B2B2RC85 870 aa15.16■□□□□ 0.02
LDB3-209ENST00000623056 HIP1RO75146 1068 aa15.16■□□□□ 0.02
LDB3-209ENST00000623056 GGPS1O95749 300 aa15.16■□□□□ 0.02
LDB3-209ENST00000623056 RSPH10BP0C881 870 aa15.16■□□□□ 0.02
LDB3-209ENST00000623056 COILP38432 576 aaPredicted RBP15.16■□□□□ 0.02
LDB3-209ENST00000623056 ECHDC2Q86YB7 292 aa15.16■□□□□ 0.02
LDB3-209ENST00000623056 RHOT2Q8IXI1 618 aa15.16■□□□□ 0.02
LDB3-209ENST00000623056 ADGRF4Q8IZF3 695 aa15.16■□□□□ 0.02
LDB3-209ENST00000623056 KLHL14Q9P2G3 628 aa15.16■□□□□ 0.02
LDB3-209ENST00000623056 FRMPD4Q14CM0 1322 aa15.16■□□□□ 0.02
LDB3-209ENST00000623056 PASKQ96RG2 1323 aa15.16■□□□□ 0.02
LDB3-209ENST00000623056 GCNT3O95395 438 aa15.16■□□□□ 0.02
LDB3-209ENST00000623056 HADHBP55084 474 aaKnown RBP15.16■□□□□ 0.02
LDB3-209ENST00000623056 MKRN3Q13064 507 aaKnown RBP15.16■□□□□ 0.02
LDB3-209ENST00000623056 SEL1L2Q5TEA6 688 aa15.16■□□□□ 0.02
LDB3-209ENST00000623056 AP1ARQ63HQ0 302 aa15.16■□□□□ 0.02
LDB3-209ENST00000623056 TRIM68Q6AZZ1 485 aa15.16■□□□□ 0.02
LDB3-209ENST00000623056 CLEC4GQ6UXB4 293 aa15.16■□□□□ 0.02
LDB3-209ENST00000623056 TEX9Q8N6V9 391 aa15.16■□□□□ 0.02
LDB3-209ENST00000623056 SYT2Q8N9I0 419 aaPredicted RBP15.16■□□□□ 0.02
LDB3-209ENST00000623056 PSTPIP2Q9H939 334 aa15.16■□□□□ 0.02
LDB3-209ENST00000623056 AAASQ9NRG9 546 aa15.16■□□□□ 0.02
LDB3-209ENST00000623056 CTTNBP2NLQ9P2B4 639 aa15.16■□□□□ 0.02
LDB3-209ENST00000623056 MYO3BQ8WXR4 1341 aa15.16■□□□□ 0.02
LDB3-209ENST00000623056 GNAZP19086 355 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 ATP5DP30049 168 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 BTDP43251 543 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 KCNJ1P48048 391 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 PEX5P50542 639 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 CCDC15Q0P6D6 951 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 CTTNQ14247 550 aaKnown RBP15.15■□□□□ 0.02
LDB3-209ENST00000623056 CYP1B1Q16678 543 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 SLC10A5Q5PT55 438 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 FAM186BQ8IYM0 893 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 GJD4Q96KN9 370 aaPredicted RBP15.15■□□□□ 0.02
LDB3-209ENST00000623056 NAP1L4Q99733 375 aaKnown RBP15.15■□□□□ 0.02
LDB3-209ENST00000623056 IKZF4Q9H2S9 585 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 DNM3Q9UQ16 869 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 ATF5Q9Y2D1 282 aaPredicted RBP15.15■□□□□ 0.02
LDB3-209ENST00000623056 THSD7AQ9UPZ6 1657 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 CDK5RAP2Q96SN8 1893 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 TGFB1I1O43294 461 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 TTLL1O95922 423 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 LDHCP07864 332 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 SNHG28P0DPA3 235 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms