RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 COBLL1Q53SF7 1204 aa21.83■■□□□ 1.08
PDLIM2-221ENST00000622702 STXBP4Q6ZWJ1 553 aa21.83■■□□□ 1.08
PDLIM2-221ENST00000622702 OTOP2Q7RTS6 562 aa21.83■■□□□ 1.08
PDLIM2-221ENST00000622702 GLIS3Q8NEA6 775 aa21.83■■□□□ 1.08
PDLIM2-221ENST00000622702 HVCN1Q96D96 273 aa21.83■■□□□ 1.08
PDLIM2-221ENST00000622702 OSMRQ99650 979 aa21.83■■□□□ 1.08
PDLIM2-221ENST00000622702 CDHR5Q9HBB8 845 aa21.83■■□□□ 1.08
PDLIM2-221ENST00000622702 GINS2Q9Y248 185 aa21.83■■□□□ 1.08
PDLIM2-221ENST00000622702 GDAQ9Y2T3 454 aa21.83■■□□□ 1.08
PDLIM2-221ENST00000622702 PCDHB13Q9Y5F0 798 aa21.83■■□□□ 1.08
PDLIM2-221ENST00000622702 TET1Q8NFU7 2136 aa21.82■■□□□ 1.08
PDLIM2-221ENST00000622702 DENND3A2RUS2 1198 aa21.82■■□□□ 1.08
PDLIM2-221ENST00000622702 MYBP10242 640 aa21.82■■□□□ 1.08
PDLIM2-221ENST00000622702 EIF4BP23588 611 aaKnown RBP21.82■■□□□ 1.08
PDLIM2-221ENST00000622702 ISM2Q6H9L7 571 aa21.82■■□□□ 1.08
PDLIM2-221ENST00000622702 RNPC3Q96LT9 517 aaKnown RBP21.82■■□□□ 1.08
PDLIM2-221ENST00000622702 INO80BQ9C086 356 aaPredicted RBP21.82■■□□□ 1.08
PDLIM2-221ENST00000622702 CCDC113Q9H0I3 377 aa21.82■■□□□ 1.08
PDLIM2-221ENST00000622702 UBE4BO95155 1302 aa21.81■■□□□ 1.08
PDLIM2-221ENST00000622702 CXCL10P02778 98 aa21.81■■□□□ 1.08
PDLIM2-221ENST00000622702 NLRP12P59046 1061 aa21.81■■□□□ 1.08
PDLIM2-221ENST00000622702 MBTD1Q05BQ5 628 aa21.81■■□□□ 1.08
PDLIM2-221ENST00000622702 BMT2Q1RMZ1 405 aa21.81■■□□□ 1.08
PDLIM2-221ENST00000622702 ZC2HC1CQ53FD0 456 aaPredicted RBP21.81■■□□□ 1.08
PDLIM2-221ENST00000622702 SASS6Q6UVJ0 657 aa21.81■■□□□ 1.08
PDLIM2-221ENST00000622702 TAS1R3Q7RTX0 852 aa21.81■■□□□ 1.08
PDLIM2-221ENST00000622702 ZNF507Q8TCN5 953 aa21.81■■□□□ 1.08
PDLIM2-221ENST00000622702 SCFD1Q8WVM8 642 aa21.81■■□□□ 1.08
PDLIM2-221ENST00000622702 TMEM40Q8WWA1 233 aa21.81■■□□□ 1.08
PDLIM2-221ENST00000622702 OSBPL7Q9BZF2 842 aa21.81■■□□□ 1.08
PDLIM2-221ENST00000622702 FZD8Q9H461 694 aa21.81■■□□□ 1.08
PDLIM2-221ENST00000622702 MINDY3Q9H8M7 445 aa21.81■■□□□ 1.08
PDLIM2-221ENST00000622702 SQORQ9Y6N5 450 aa21.81■■□□□ 1.08
PDLIM2-221ENST00000622702 SIP14410 1827 aa21.8■■□□□ 1.08
PDLIM2-221ENST00000622702 SYCE3A1L190 88 aa21.8■■□□□ 1.08
PDLIM2-221ENST00000622702 K7ERI5 159 aa21.8■■□□□ 1.08
PDLIM2-221ENST00000622702 PCBP1Q15365 356 aaKnown RBP eCLIP21.8■■□□□ 1.08
PDLIM2-221ENST00000622702 MAPK6Q16659 721 aa21.8■■□□□ 1.08
PDLIM2-221ENST00000622702 FAM187BQ17R55 369 aa21.8■■□□□ 1.08
PDLIM2-221ENST00000622702 MYOCDQ8IZQ8 938 aa21.8■■□□□ 1.08
PDLIM2-221ENST00000622702 GUF1Q8N442 669 aaKnown RBP21.8■■□□□ 1.08
PDLIM2-221ENST00000622702 HERVK_113Q902F9 699 aa21.8■■□□□ 1.08
PDLIM2-221ENST00000622702 TBX20Q9UMR3 447 aa21.8■■□□□ 1.08
PDLIM2-221ENST00000622702 INO80B-WBP1J3KQ70 363 aa21.79■■□□□ 1.08
PDLIM2-221ENST00000622702 KIF20AO95235 890 aa21.79■■□□□ 1.08
PDLIM2-221ENST00000622702 ACTN1P12814 892 aa21.79■■□□□ 1.08
PDLIM2-221ENST00000622702 PPP1R2P41236 205 aa21.79■■□□□ 1.08
PDLIM2-221ENST00000622702 FBXO47Q5MNV8 452 aa21.79■■□□□ 1.08
PDLIM2-221ENST00000622702 L1TD1Q5T7N2 865 aaKnown RBP21.79■■□□□ 1.08
PDLIM2-221ENST00000622702 PPP4R3CPQ6ZMV5 832 aa21.79■■□□□ 1.08
PDLIM2-221ENST00000622702 MAP4K3Q8IVH8 894 aa21.79■■□□□ 1.08
PDLIM2-221ENST00000622702 SMYD4Q8IYR2 804 aaPredicted RBP21.79■■□□□ 1.08
PDLIM2-221ENST00000622702 USP38Q8NB14 1042 aa21.79■■□□□ 1.08
PDLIM2-221ENST00000622702 MLKLQ8NB16 471 aa21.79■■□□□ 1.08
PDLIM2-221ENST00000622702 PRIMPOLQ96LW4 560 aa21.79■■□□□ 1.08
PDLIM2-221ENST00000622702 PRMT7Q9NVM4 692 aaPredicted RBP21.79■■□□□ 1.08
PDLIM2-221ENST00000622702 PRPF6O94906 941 aaKnown RBP21.78■■□□□ 1.08
PDLIM2-221ENST00000622702 PRCPP42785 496 aa21.78■■□□□ 1.08
PDLIM2-221ENST00000622702 STRN3Q13033 797 aa21.78■■□□□ 1.08
PDLIM2-221ENST00000622702 CNKSR3Q6P9H4 555 aa21.78■■□□□ 1.08
PDLIM2-221ENST00000622702 ADSSL1Q8N142 457 aa21.78■■□□□ 1.08
PDLIM2-221ENST00000622702 ACCSQ96QU6 501 aa21.78■■□□□ 1.08
PDLIM2-221ENST00000622702 FUCA2Q9BTY2 467 aa21.78■■□□□ 1.08
PDLIM2-221ENST00000622702 MTIF3Q9H2K0 278 aaKnown RBP21.78■■□□□ 1.08
PDLIM2-221ENST00000622702 ANO10Q9NW15 660 aa21.78■■□□□ 1.08
PDLIM2-221ENST00000622702 CXXC1Q9P0U4 656 aaPredicted RBP21.78■■□□□ 1.08
PDLIM2-221ENST00000622702 ZBBXA8MT70 800 aa21.77■■□□□ 1.08
PDLIM2-221ENST00000622702 ACKR2O00590 384 aa21.77■■□□□ 1.08
PDLIM2-221ENST00000622702 CSDE1O75534 798 aaKnown RBP21.77■■□□□ 1.08
PDLIM2-221ENST00000622702 PRKCBP05771 671 aa21.77■■□□□ 1.08
PDLIM2-221ENST00000622702 GHRP10912 638 aa21.77■■□□□ 1.08
PDLIM2-221ENST00000622702 SFPQP23246 707 aaKnown RBP eCLIP21.77■■□□□ 1.08
PDLIM2-221ENST00000622702 HOXD13P35453 343 aa21.77■■□□□ 1.08
PDLIM2-221ENST00000622702 TYRO3Q06418 890 aa21.77■■□□□ 1.08
PDLIM2-221ENST00000622702 KCNA1Q09470 495 aa21.77■■□□□ 1.08
PDLIM2-221ENST00000622702 STX1AQ16623 288 aa21.77■■□□□ 1.08
PDLIM2-221ENST00000622702 AMHR2Q16671 573 aa21.77■■□□□ 1.08
PDLIM2-221ENST00000622702 TCTN1Q2MV58 587 aa21.77■■□□□ 1.08
PDLIM2-221ENST00000622702 DPCR1Q3MIW9 517 aa21.77■■□□□ 1.08
PDLIM2-221ENST00000622702 LRIT3Q3SXY7 679 aa21.77■■□□□ 1.08
PDLIM2-221ENST00000622702 PLEKHG4Q58EX7 1191 aa21.77■■□□□ 1.08
PDLIM2-221ENST00000622702 RASIP1Q5U651 963 aa21.77■■□□□ 1.08
PDLIM2-221ENST00000622702 DBF4BQ8NFT6 615 aa21.77■■□□□ 1.08
PDLIM2-221ENST00000622702 TMEM206Q9H813 350 aa21.77■■□□□ 1.08
PDLIM2-221ENST00000622702 NOC2LQ9Y3T9 749 aaKnown RBP21.77■■□□□ 1.08
PDLIM2-221ENST00000622702 PPP1R3GB7ZBB8 358 aa21.77■■□□□ 1.07
PDLIM2-221ENST00000622702 PIGRP01833 764 aa21.77■■□□□ 1.07
PDLIM2-221ENST00000622702 CCDC192P0DO97 292 aa21.77■■□□□ 1.07
PDLIM2-221ENST00000622702 CD44P16070 742 aaKnown RBP21.77■■□□□ 1.07
PDLIM2-221ENST00000622702 STIM1Q13586 685 aa21.77■■□□□ 1.07
PDLIM2-221ENST00000622702 LPIN1Q14693 890 aa21.77■■□□□ 1.07
PDLIM2-221ENST00000622702 TSHZ1Q6ZSZ6 1077 aa21.77■■□□□ 1.07
PDLIM2-221ENST00000622702 FAM228AQ86W67 206 aa21.77■■□□□ 1.07
PDLIM2-221ENST00000622702 GZF1Q9H116 711 aaPredicted RBP21.77■■□□□ 1.07
PDLIM2-221ENST00000622702 EXOC7Q9UPT5 735 aa21.77■■□□□ 1.07
PDLIM2-221ENST00000622702 MAPK8IP1Q9UQF2 711 aa21.77■■□□□ 1.07
PDLIM2-221ENST00000622702 RPS6KA5O75582 802 aa21.76■■□□□ 1.07
PDLIM2-221ENST00000622702 KNOP1Q1ED39 458 aaKnown RBP21.76■■□□□ 1.07
PDLIM2-221ENST00000622702 ZPBP2Q6X784 338 aa21.76■■□□□ 1.07
PDLIM2-221ENST00000622702 CATSPER4Q7RTX7 472 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms