RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 ITGA4P13612 1032 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 EIF2AK2P19525 551 aaKnown RBP10.2□□□□□ -0.78
PDPN-212ENST00000621990 IRAK1P51617 712 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 LRIG3Q6UXM1 1119 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 MAP4K3Q8IVH8 894 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 FAM71AQ8IYT1 594 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 RDH13Q8NBN7 331 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 TMEM161BQ8NDZ6 487 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 NTPCRQ9BSD7 190 aaKnown RBP10.2□□□□□ -0.78
PDPN-212ENST00000621990 TMEM117Q9H0C3 514 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 UBE2TQ9NPD8 197 aaPredicted RBP10.2□□□□□ -0.78
PDPN-212ENST00000621990 NOCTQ9UK39 431 aaKnown RBP10.2□□□□□ -0.78
PDPN-212ENST00000621990 COQ4Q9Y3A0 265 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 SAMM50Q9Y512 469 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 KRT14P02533 472 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 RPS12P25398 132 aaKnown RBP10.2□□□□□ -0.78
PDPN-212ENST00000621990 ADSSP30520 456 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 GUCY2FP51841 1108 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 PPP2R5EQ16537 467 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 ARHGAP44Q17R89 818 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 ZNF746Q6NUN9 644 aaPredicted RBP10.2□□□□□ -0.78
PDPN-212ENST00000621990 FOXR1Q6PIV2 292 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 MAEAQ7L5Y9 396 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 MAATS1Q7Z4T9 603 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 CPXCR1Q8N123 301 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 SLC20A1Q8WUM9 679 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 RMDN3Q96TC7 470 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 CAPS2Q9BXY5 557 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 DDX47Q9H0S4 455 aaKnown RBP10.2□□□□□ -0.78
PDPN-212ENST00000621990 C17orf75Q9HAS0 396 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 ZNFX1Q9P2E3 1918 aaKnown RBP10.2□□□□□ -0.78
PDPN-212ENST00000621990 VWA5AO00534 786 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 LRRN2O75325 713 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 GZMAP12544 262 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 GCLMP48507 274 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 MXI1P50539 228 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 PEX3P56589 373 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 PTENP60484 403 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 DGKZQ13574 1117 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 RNF207Q6ZRF8 634 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 SRLQ86TD4 932 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 ZSWIM2Q8NEG5 633 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 CCDC26Q8TAB7 109 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 SPIRE2Q8WWL2 714 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 GPRASP2Q96D09 838 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 FBXL18Q96ME1 805 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 TRERF1Q96PN7 1200 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 NAP1L3Q99457 506 aaPredicted RBP10.2□□□□□ -0.78
PDPN-212ENST00000621990 GPRC5CQ9NQ84 441 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 HOMER2Q9NSB8 354 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 TBX20Q9UMR3 447 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 EXOC7Q9UPT5 735 aa10.2□□□□□ -0.78
PDPN-212ENST00000621990 KIAA1217Q5T5P2 1943 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 PHIPQ8WWQ0 1821 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 TMEM150BA6NC51 233 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 H0YGN5 161 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 EIF3HO15372 352 aaKnown RBP eCLIP10.19□□□□□ -0.78
PDPN-212ENST00000621990 SLC16A4O15374 487 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 MAFGO15525 162 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 ZBED4O75132 1171 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 STBD1O95210 358 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 EGFRP00533 1210 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 ADRB2P07550 413 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 ABCB4P21439 1286 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 MTMR2Q13614 643 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 SNRNP35Q16560 246 aaKnown RBP10.19□□□□□ -0.78
PDPN-212ENST00000621990 PTPROQ16827 1216 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 KDM7AQ6ZMT4 941 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 ANO5Q75V66 913 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 VSIG10LQ86VR7 867 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 REPS2Q8NFH8 660 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 EPS8L1Q8TE68 723 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 SLC16A10Q8TF71 515 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 MOV10L1Q9BXT6 1211 aaKnown RBP10.19□□□□□ -0.78
PDPN-212ENST00000621990 PLEKHA4Q9H4M7 779 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 RPAP3Q9H6T3 665 aaPredicted RBP10.19□□□□□ -0.78
PDPN-212ENST00000621990 AMACRQ9UHK6 382 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 ADAMTS5Q9UNA0 930 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 NFS1Q9Y697 457 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 MIF4GDA9UHW6 222 aaKnown RBP10.19□□□□□ -0.78
PDPN-212ENST00000621990 FGGP02679 453 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 CHRNB2P17787 502 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 HSD17B3P37058 310 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 NPTX2P47972 431 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 OAZ1P54368 228 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 RTP1P59025 263 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 UAP1Q16222 522 aaPredicted RBP10.19□□□□□ -0.78
PDPN-212ENST00000621990 SHC3Q92529 594 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 LRRC45Q96CN5 670 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 RNPC3Q96LT9 517 aaKnown RBP10.19□□□□□ -0.78
PDPN-212ENST00000621990 NEUROG2Q9H2A3 272 aa10.19□□□□□ -0.78
PDPN-212ENST00000621990 HMGB1P1B2RPK0 211 aaPredicted RBP10.18□□□□□ -0.78
PDPN-212ENST00000621990 RTN2O75298 545 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 FTLP02792 175 aaPredicted RBP10.18□□□□□ -0.78
PDPN-212ENST00000621990 GTF2H1P32780 548 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 GPC3P51654 580 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 GPC5P78333 572 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 DMP1Q13316 513 aaPredicted RBP10.18□□□□□ -0.78
PDPN-212ENST00000621990 SPDYCQ5MJ68 293 aa10.18□□□□□ -0.78
PDPN-212ENST00000621990 ARHGEF16Q5VV41 709 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms