RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 MRPL10Q7Z7H8 261 aaKnown RBP18.77■□□□□ 0.6
TARDBP-225ENST00000621715 BLIDQ8IZY5 108 aa18.77■□□□□ 0.6
TARDBP-225ENST00000621715 KCNJ14Q9UNX9 436 aa18.77■□□□□ 0.6
TARDBP-225ENST00000621715 DOCK6Q96HP0 2047 aa18.77■□□□□ 0.6
TARDBP-225ENST00000621715 ZBTB39O15060 712 aa18.76■□□□□ 0.59
TARDBP-225ENST00000621715 NARSO43776 548 aaKnown RBP18.76■□□□□ 0.59
TARDBP-225ENST00000621715 DNM2P50570 870 aa18.76■□□□□ 0.59
TARDBP-225ENST00000621715 PSMC5P62195 406 aa18.76■□□□□ 0.59
TARDBP-225ENST00000621715 FRMD5Q7Z6J6 570 aa18.76■□□□□ 0.59
TARDBP-225ENST00000621715 DAGLBQ8NCG7 672 aa18.76■□□□□ 0.59
TARDBP-225ENST00000621715 SMG8Q8ND04 991 aaKnown RBP18.76■□□□□ 0.59
TARDBP-225ENST00000621715 PRPF31Q8WWY3 499 aaKnown RBP18.76■□□□□ 0.59
TARDBP-225ENST00000621715 RNF39Q9H2S5 420 aa18.76■□□□□ 0.59
TARDBP-225ENST00000621715 SFXN1Q9H9B4 322 aa18.76■□□□□ 0.59
TARDBP-225ENST00000621715 GJB4Q9NTQ9 266 aa18.76■□□□□ 0.59
TARDBP-225ENST00000621715 DDX25Q9UHL0 483 aaKnown RBP18.76■□□□□ 0.59
TARDBP-225ENST00000621715 COL4A3BPQ9Y5P4 624 aa18.76■□□□□ 0.59
TARDBP-225ENST00000621715 NRP1O14786 923 aa18.75■□□□□ 0.59
TARDBP-225ENST00000621715 EFEMP2O95967 443 aa18.75■□□□□ 0.59
TARDBP-225ENST00000621715 SRGAP2CP0DJJ0 459 aa18.75■□□□□ 0.59
TARDBP-225ENST00000621715 RAB27AP51159 221 aa18.75■□□□□ 0.59
TARDBP-225ENST00000621715 CDC42EP1Q00587 391 aa18.75■□□□□ 0.59
TARDBP-225ENST00000621715 GIT2Q14161 759 aa18.75■□□□□ 0.59
TARDBP-225ENST00000621715 POTEGQ6S5H5 508 aa18.75■□□□□ 0.59
TARDBP-225ENST00000621715 FLCNQ8NFG4 579 aa18.75■□□□□ 0.59
TARDBP-225ENST00000621715 RSAD2Q8WXG1 361 aa18.75■□□□□ 0.59
TARDBP-225ENST00000621715 IRF2BPLQ9H1B7 796 aa18.75■□□□□ 0.59
TARDBP-225ENST00000621715 DHX33Q9H6R0 707 aaKnown RBP18.75■□□□□ 0.59
TARDBP-225ENST00000621715 RSAD1Q9HA92 442 aa18.75■□□□□ 0.59
TARDBP-225ENST00000621715 KCNK12Q9HB15 430 aa18.75■□□□□ 0.59
TARDBP-225ENST00000621715 KCNMB3Q9NPA1 279 aa18.75■□□□□ 0.59
TARDBP-225ENST00000621715 C2CD2LO14523 706 aa18.74■□□□□ 0.59
TARDBP-225ENST00000621715 SKIP12755 728 aa18.74■□□□□ 0.59
TARDBP-225ENST00000621715 KLRC2P26717 231 aa18.74■□□□□ 0.59
TARDBP-225ENST00000621715 CLCN5P51795 746 aa18.74■□□□□ 0.59
TARDBP-225ENST00000621715 SSRP1Q08945 709 aaKnown RBP18.74■□□□□ 0.59
TARDBP-225ENST00000621715 LAMTOR4Q0VGL1 99 aa18.74■□□□□ 0.59
TARDBP-225ENST00000621715 PPP2R5CQ13362 524 aa18.74■□□□□ 0.59
TARDBP-225ENST00000621715 BMS1Q14692 1282 aaKnown RBP18.74■□□□□ 0.59
TARDBP-225ENST00000621715 MOXD1Q6UVY6 613 aa18.74■□□□□ 0.59
TARDBP-225ENST00000621715 RNF168Q8IYW5 571 aaPredicted RBP18.74■□□□□ 0.59
TARDBP-225ENST00000621715 PLCD3Q8N3E9 789 aa18.74■□□□□ 0.59
TARDBP-225ENST00000621715 TMEM87AQ8NBN3 555 aa18.74■□□□□ 0.59
TARDBP-225ENST00000621715 HAS1Q92839 578 aa18.74■□□□□ 0.59
TARDBP-225ENST00000621715 EIF2AQ9BY44 585 aaKnown RBP18.74■□□□□ 0.59
TARDBP-225ENST00000621715 INO80BQ9C086 356 aaPredicted RBP18.74■□□□□ 0.59
TARDBP-225ENST00000621715 ZSWIM6Q9HCJ5 1215 aa18.74■□□□□ 0.59
TARDBP-225ENST00000621715 MIOSQ9NXC5 875 aa18.74■□□□□ 0.59
TARDBP-225ENST00000621715 RGL1Q9NZL6 768 aa18.74■□□□□ 0.59
TARDBP-225ENST00000621715 HES2Q9Y543 173 aa18.74■□□□□ 0.59
TARDBP-225ENST00000621715 EP300Q09472 2414 aaPredicted RBP18.74■□□□□ 0.59
TARDBP-225ENST00000621715 TDRD15B5MCY1 1934 aaKnown RBP18.74■□□□□ 0.59
TARDBP-225ENST00000621715 QARSP47897 775 aaKnown RBP18.73■□□□□ 0.59
TARDBP-225ENST00000621715 STK3Q13188 491 aa18.73■□□□□ 0.59
TARDBP-225ENST00000621715 LETM2Q2VYF4 491 aa18.73■□□□□ 0.59
TARDBP-225ENST00000621715 EARS2Q5JPH6 523 aaKnown RBP18.73■□□□□ 0.59
TARDBP-225ENST00000621715 CCDC149Q6ZUS6 474 aa18.73■□□□□ 0.59
TARDBP-225ENST00000621715 RUFY3Q7L099 469 aa18.73■□□□□ 0.59
TARDBP-225ENST00000621715 COLGALT2Q8IYK4 626 aa18.73■□□□□ 0.59
TARDBP-225ENST00000621715 OXER1Q8TDS5 423 aa18.73■□□□□ 0.59
TARDBP-225ENST00000621715 CEP170P1Q96L14 293 aa18.73■□□□□ 0.59
TARDBP-225ENST00000621715 B3GALT6Q96L58 329 aa18.73■□□□□ 0.59
TARDBP-225ENST00000621715 MFSD1Q9H3U5 465 aa18.73■□□□□ 0.59
TARDBP-225ENST00000621715 MAN1C1Q9NR34 630 aa18.73■□□□□ 0.59
TARDBP-225ENST00000621715 DUSP12Q9UNI6 340 aa18.73■□□□□ 0.59
TARDBP-225ENST00000621715 FAN1Q9Y2M0 1017 aa18.73■□□□□ 0.59
TARDBP-225ENST00000621715 PRG3Q9Y2Y8 225 aaPredicted RBP18.73■□□□□ 0.59
TARDBP-225ENST00000621715 FAM205CA6NFA0 338 aa18.72■□□□□ 0.59
TARDBP-225ENST00000621715 TEX28O15482 410 aa18.72■□□□□ 0.59
TARDBP-225ENST00000621715 RFPL2O75678 378 aa18.72■□□□□ 0.59
TARDBP-225ENST00000621715 DEXIO95424 95 aa18.72■□□□□ 0.59
TARDBP-225ENST00000621715 SPIRE1Q08AE8 756 aa18.72■□□□□ 0.59
TARDBP-225ENST00000621715 TDGQ13569 410 aa18.72■□□□□ 0.59
TARDBP-225ENST00000621715 NONOQ15233 471 aaKnown RBP eCLIP18.72■□□□□ 0.59
TARDBP-225ENST00000621715 PPFIBP1Q86W92 1011 aa18.72■□□□□ 0.59
TARDBP-225ENST00000621715 TRIM22Q8IYM9 498 aa18.72■□□□□ 0.59
TARDBP-225ENST00000621715 ST13P5Q8NFI4 369 aaPredicted RBP18.72■□□□□ 0.59
TARDBP-225ENST00000621715 URGCPQ8TCY9 931 aa18.72■□□□□ 0.59
TARDBP-225ENST00000621715 RSPH1Q8WYR4 309 aa18.72■□□□□ 0.59
TARDBP-225ENST00000621715 PGBD4Q96DM1 585 aa18.72■□□□□ 0.59
TARDBP-225ENST00000621715 ZFP42Q96MM3 310 aa18.72■□□□□ 0.59
TARDBP-225ENST00000621715 TMEM175Q9BSA9 504 aa18.72■□□□□ 0.59
TARDBP-225ENST00000621715 XPNPEP1Q9NQW7 623 aa18.72■□□□□ 0.59
TARDBP-225ENST00000621715 MTCL1Q9Y4B5 1905 aaKnown RBP18.72■□□□□ 0.59
TARDBP-225ENST00000621715 COL4A3Q01955 1670 aa18.71■□□□□ 0.59
TARDBP-225ENST00000621715 KRBA1A5PL33 1030 aa18.71■□□□□ 0.59
TARDBP-225ENST00000621715 SOD2P04179 222 aa18.71■□□□□ 0.59
TARDBP-225ENST00000621715 ALDH2P05091 517 aa18.71■□□□□ 0.59
TARDBP-225ENST00000621715 SPATA31D3P0C874 917 aa18.71■□□□□ 0.59
TARDBP-225ENST00000621715 NCLP19338 710 aaKnown RBP18.71■□□□□ 0.59
TARDBP-225ENST00000621715 AOC1P19801 751 aa18.71■□□□□ 0.59
TARDBP-225ENST00000621715 EMC2Q15006 297 aa18.71■□□□□ 0.59
TARDBP-225ENST00000621715 KIAA0319Q5VV43 1072 aa18.71■□□□□ 0.59
TARDBP-225ENST00000621715 SPATA31D4Q6ZUB0 917 aa18.71■□□□□ 0.59
TARDBP-225ENST00000621715 OTOP3Q7RTS5 596 aa18.71■□□□□ 0.59
TARDBP-225ENST00000621715 SRGAP1Q7Z6B7 1085 aa18.71■□□□□ 0.59
TARDBP-225ENST00000621715 SIX5Q8N196 739 aa18.71■□□□□ 0.59
TARDBP-225ENST00000621715 RNF149Q8NC42 400 aa18.71■□□□□ 0.59
TARDBP-225ENST00000621715 PSPC1Q8WXF1 523 aaKnown RBP18.71■□□□□ 0.59
TARDBP-225ENST00000621715 CPB2Q96IY4 423 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms