RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 GOLGA8KD6RF30 607 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 GLI1P08151 1106 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 CYP4F22Q6NT55 531 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 ZNF746Q6NUN9 644 aaPredicted RBP8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 EMBQ6PCB8 327 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 RMDN2Q96LZ7 410 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 FAM213AQ9BRX8 229 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 FAM8A1Q9UBU6 413 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 SNED1Q8TER0 1413 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 SCN7AQ01118 1682 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 SSU72P8A0A1W2PR75 194 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 NDUFAB1O14561 156 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 DDNO94850 711 aaPredicted RBP8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 XPAP23025 273 aaPredicted RBP8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 LIG3P49916 1009 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 MNAT1P51948 309 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 PAK2Q13177 524 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 SLC15A2Q16348 729 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 LDHDQ86WU2 507 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 PROM2Q8N271 834 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 DYDC2Q96IM9 177 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 GCNT4Q9P109 453 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 IPO5O00410 1097 aaKnown RBP8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 ZNF543Q08ER8 600 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 KCNH2Q12809 1159 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 PDCD6IPQ8WUM4 868 aaKnown RBP8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 HAS1Q92839 578 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 SPATA33Q96N06 139 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 ZIM3Q96PE6 472 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 NUCKS1Q9H1E3 243 aaKnown RBP8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 MOSPD1Q9UJG1 213 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 TSKSQ9UJT2 592 aa8.89□□□□□ -0.99
PTPDC1-204ENST00000620992 CCDC160A6NGH7 325 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 hCG_1984214I3L0E3 225 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 CLDN3O15551 220 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 TLR2O60603 784 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 FAM153BP0C7A2 387 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 PRLRP16471 622 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 ORC2Q13416 577 aaPredicted RBP8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 NNTQ13423 1086 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 FAM153CQ494X1 144 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 HGSNATQ68CP4 663 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 SLC30A10Q6XR72 485 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 SP8Q8IXZ3 490 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 RNF10Q8N5U6 811 aaKnown RBP8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 ZNF713Q8N859 430 aaPredicted RBP8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 GDAP1Q8TB36 358 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 DNAJC19Q96DA6 116 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 FAM153AQ9UHL3 310 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 ZC3H4Q9UPT8 1303 aaKnown RBP8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 ROBO1Q9Y6N7 1651 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 DENND3A2RUS2 1198 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 RPS6KA5O75582 802 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 NDUFB10O96000 172 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 PSAPP07602 524 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 TXNP10599 105 aaKnown RBP8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 MAGEA9P43362 315 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 SFR1Q86XK3 245 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 NSUN6Q8TEA1 469 aaKnown RBP8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 POLLQ9UGP5 575 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 DLEC1Q9Y238 1755 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 POC1B-GALNT4F8VUJ3 575 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 PPP1R12AO14974 1030 aaPredicted RBP8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 PPP1R11O60927 126 aaPredicted RBP8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 TAL1P17542 331 aaPredicted RBP8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 SLC9A1P19634 815 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 SMARCA1P28370 1054 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 ATN1P54259 1190 aaPredicted RBP8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 BFSP1Q12934 665 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 SLC18A3Q16572 532 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 TMEM119Q4V9L6 283 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 C6orf163Q5TEZ5 329 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 FAM160B2Q86V87 743 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 PALM2Q8IXS6 379 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 PPP1R13LQ8WUF5 828 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 ANKRD36BP1Q96IX9 119 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 CDHR1Q96JP9 859 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 AP1M1Q9BXS5 423 aa8.88□□□□□ -0.99
PTPDC1-204ENST00000620992 LAMB1P07942 1786 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 GNA14O95837 355 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 TRIM49P0CI25 452 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 TRIM49CP0CI26 452 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 PSMC2P35998 433 aaKnown RBP8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 MKRN4PQ13434 485 aaPredicted RBP8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 TRADDQ15628 312 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 TMCO4Q5TGY1 634 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 CDC42EP5Q6NZY7 148 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 PPM1EQ8WY54 764 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 PRMT6Q96LA8 375 aaPredicted RBP8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 CRAMP1Q96RY5 1269 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 NAP1L3Q99457 506 aaPredicted RBP8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 DDX4Q9NQI0 724 aaKnown RBP8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 RAB20Q9NX57 234 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 KIAA1551Q9HCM1 1747 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 SPDYE2BA6NHP3 402 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 NOL4O94818 638 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 MOCS2O96007 188 aaPredicted RBP8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 SPDYE6P0CI01 402 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 ZNF568Q3ZCX4 644 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 COBLL1Q53SF7 1204 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms