RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 PHLDB2Q86SQ0 1253 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 CCDC65Q8IXS2 484 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 UBL4BQ8N7F7 174 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 DYNLL2Q96FJ2 89 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 RUNDC3BQ96NL0 473 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 RIC8AQ9NPQ8 531 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 EMILIN3Q9NT22 766 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 KIAA1024Q9UPX6 916 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 E9PMD0 336 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 NPTXRO95502 500 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 GM2AP17900 193 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 MARK3P27448 753 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 CTTNQ14247 550 aaKnown RBP10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 TAF1BQ53T94 588 aaPredicted RBP10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 GPBP1Q86WP2 473 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 TAB3Q8N5C8 712 aaPredicted RBP10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 PHC3Q8NDX5 983 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 BORCS6Q96GS4 357 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 AK8Q96MA6 479 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 EDEM3Q9BZQ6 932 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 CARD9Q9H257 536 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 PARP2Q9UGN5 583 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 RPS6KL1Q9Y6S9 549 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 KLRF2D3W0D1 207 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 KIAA0391O15091 583 aaKnown RBP10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 HNRNPRO43390 633 aaKnown RBP10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 PLS1Q14651 629 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 DUPD1Q68J44 220 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 RFWD3Q6PCD5 774 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 MMADHCQ9H3L0 296 aaPredicted RBP10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 DCLRE1BQ9H816 532 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 SUCLA2Q9P2R7 463 aaPredicted RBP10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 LRRC42Q9Y546 428 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 COL14A1Q05707 1796 aaKnown RBP10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 TDP2O95551 362 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 AFPP02771 609 aaKnown RBP10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 ALADP13716 330 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 PTENP60484 403 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 GSTA5Q7RTV2 222 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 KCNK18Q7Z418 384 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 MTDHQ86UE4 582 aaKnown RBP10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 HIPK4Q8NE63 616 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 TBC1D16Q8TBP0 767 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 ATP8B4Q8TF62 1192 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 UTP4Q969X6 686 aaKnown RBP10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 FGFBP2Q9BYJ0 223 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 OCEL1Q9H607 264 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 FBXO3Q9UK99 471 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 PHTF1Q9UMS5 762 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 LRCH1Q9Y2L9 728 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 ZNF711Q9Y462 761 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 PFASO15067 1338 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 PASKQ96RG2 1323 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 CAMTA2O94983 1202 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 MARCKSL1P49006 195 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 MTM1Q13496 603 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 KPNB1Q14974 876 aaKnown RBP10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 MDH1BQ5I0G3 518 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 NSMFQ6X4W1 530 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 REXO1Q8N1G1 1221 aaKnown RBP10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 CEP70Q8NHQ1 597 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 ARHGEF1Q92888 912 aaKnown RBP10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 KCNMB3Q9NPA1 279 aa10.46□□□□□ -0.73
TNFAIP3-210ENST00000620204 EP400Q96L91 3159 aa10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 NUDT17P0C025 328 aa10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 USP17L8P0C7I0 530 aa10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 FAM200BP0CF97 657 aa10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 DLATP10515 647 aaKnown RBP10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 SERPINB3P29508 390 aa10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 GNA11P29992 359 aa10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 CETN2P41208 172 aa10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 COG7P83436 770 aa10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 KLRC3Q07444 240 aa10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 GRB10Q13322 594 aa10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 THOC5Q13769 683 aaKnown RBP10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 MPP2Q14168 576 aa10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 MAP7Q14244 749 aa10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 IRGCQ6NXR0 463 aa10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 DSTYKQ6XUX3 929 aa10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 KRT25Q7Z3Z0 450 aa10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 PRUNE1Q86TP1 453 aa10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 EIF1ADQ8N9N8 165 aaKnown RBP10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 FAM161BQ96MY7 647 aa10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 MAGEF1Q9HAY2 307 aa10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 BZW2Q9Y6E2 419 aaKnown RBP10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.46□□□□□ -0.74
TNFAIP3-210ENST00000620204 RPTORQ8N122 1335 aa10.45□□□□□ -0.74
TNFAIP3-210ENST00000620204 FAM187AA6NFU0 413 aa10.45□□□□□ -0.74
TNFAIP3-210ENST00000620204 TTC36A6NLP5 189 aa10.45□□□□□ -0.74
TNFAIP3-210ENST00000620204 O00370 1275 aa10.45□□□□□ -0.74
TNFAIP3-210ENST00000620204 MEIS1O00470 390 aa10.45□□□□□ -0.74
TNFAIP3-210ENST00000620204 DESP17661 470 aa10.45□□□□□ -0.74
TNFAIP3-210ENST00000620204 USP17L2Q6R6M4 530 aa10.45□□□□□ -0.74
TNFAIP3-210ENST00000620204 ALG3Q92685 438 aa10.45□□□□□ -0.74
TNFAIP3-210ENST00000620204 KRT35Q92764 455 aa10.45□□□□□ -0.74
TNFAIP3-210ENST00000620204 USP40Q9NVE5 1235 aa10.45□□□□□ -0.74
TNFAIP3-210ENST00000620204 BCL9LQ86UU0 1499 aa10.45□□□□□ -0.74
TNFAIP3-210ENST00000620204 WTIPA6NIX2 430 aaPredicted RBP10.45□□□□□ -0.74
TNFAIP3-210ENST00000620204 SFI1A8K8P3 1242 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms