RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 TRAF3IP3Q9Y228 551 aa11.18□□□□□ -0.62
TP53-225ENST00000619485 PTPN22Q9Y2R2 807 aa11.18□□□□□ -0.62
TP53-225ENST00000619485 DAAM1Q9Y4D1 1078 aa11.18□□□□□ -0.62
TP53-225ENST00000619485 PITPNM2Q9BZ72 1349 aa11.18□□□□□ -0.62
TP53-225ENST00000619485 PPP1R12BO60237 982 aaPredicted RBP11.18□□□□□ -0.62
TP53-225ENST00000619485 RASSF9O75901 435 aa11.18□□□□□ -0.62
TP53-225ENST00000619485 CLSTN1O94985 981 aa11.18□□□□□ -0.62
TP53-225ENST00000619485 FAM13AO94988 1023 aa11.18□□□□□ -0.62
TP53-225ENST00000619485 VIMP08670 466 aaKnown RBP11.18□□□□□ -0.62
TP53-225ENST00000619485 BMP3P12645 472 aa11.18□□□□□ -0.62
TP53-225ENST00000619485 FERP16591 822 aa11.18□□□□□ -0.62
TP53-225ENST00000619485 HOXA7P31268 230 aaPredicted RBP11.18□□□□□ -0.62
TP53-225ENST00000619485 CCDC38Q502W7 563 aa11.18□□□□□ -0.62
TP53-225ENST00000619485 AGBL2Q5U5Z8 902 aa11.18□□□□□ -0.62
TP53-225ENST00000619485 DPY19L2P1Q6NXN4 242 aa11.18□□□□□ -0.62
TP53-225ENST00000619485 HOOK3Q86VS8 718 aa11.18□□□□□ -0.62
TP53-225ENST00000619485 TPH2Q8IWU9 490 aa11.18□□□□□ -0.62
TP53-225ENST00000619485 CHMP6Q96FZ7 201 aa11.18□□□□□ -0.62
TP53-225ENST00000619485 HES6Q96HZ4 224 aa11.18□□□□□ -0.62
TP53-225ENST00000619485 AZI2Q9H6S1 392 aa11.18□□□□□ -0.62
TP53-225ENST00000619485 ACTR5Q9H9F9 607 aaPredicted RBP11.18□□□□□ -0.62
TP53-225ENST00000619485 PKD2L1Q9P0L9 805 aa11.18□□□□□ -0.62
TP53-225ENST00000619485 GGT7Q9UJ14 662 aa11.18□□□□□ -0.62
TP53-225ENST00000619485 SUFUQ9UMX1 484 aa11.18□□□□□ -0.62
TP53-225ENST00000619485 RABGAP1Q9Y3P9 1069 aa11.18□□□□□ -0.62
TP53-225ENST00000619485 MYO3BQ8WXR4 1341 aa11.18□□□□□ -0.62
TP53-225ENST00000619485 FRMD3A2A2Y4 597 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 PDXKO00764 312 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 SPATA31C1P0DKV0 1188 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 FGFR4P22455 802 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 NF2P35240 595 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 SOX5P35711 763 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 PRKCIP41743 596 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 PMS2P54278 862 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 JAM2P57087 298 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 FKBP1AP62942 108 aaKnown RBP11.17□□□□□ -0.62
TP53-225ENST00000619485 PPP1R7Q15435 360 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 UBAP2Q5T6F2 1119 aaKnown RBP11.17□□□□□ -0.62
TP53-225ENST00000619485 MAEAQ7L5Y9 396 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 PALB2Q86YC2 1186 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 FUKQ8N0W3 1084 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 RASGEF1CQ8N431 466 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 SYT2Q8N9I0 419 aaPredicted RBP11.17□□□□□ -0.62
TP53-225ENST00000619485 FBXO25Q8TCJ0 367 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 MGARPQ8TDB4 240 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 TATDN2Q93075 761 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 XPO6Q96QU8 1125 aaKnown RBP11.17□□□□□ -0.62
TP53-225ENST00000619485 METTL14Q9HCE5 456 aaKnown RBP11.17□□□□□ -0.62
TP53-225ENST00000619485 ZNRF3Q9ULT6 936 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 STXBP5LQ9Y2K9 1186 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 GJA3Q9Y6H8 435 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 BRCA1P38398 1863 aaKnown RBP11.17□□□□□ -0.62
TP53-225ENST00000619485 EML1O00423 815 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 HGSO14964 777 aaPredicted RBP11.17□□□□□ -0.62
TP53-225ENST00000619485 RGS16O15492 202 aaPredicted RBP11.17□□□□□ -0.62
TP53-225ENST00000619485 TNFAIP3P21580 790 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 IFI35P80217 286 aaPredicted RBP11.17□□□□□ -0.62
TP53-225ENST00000619485 CBWD6Q4V339 395 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 FAM133BQ5BKY9 247 aaKnown RBP11.17□□□□□ -0.62
TP53-225ENST00000619485 CBWD3Q5JTY5 395 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 CBWD5Q5RIA9 395 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 ZNF746Q6NUN9 644 aaPredicted RBP11.17□□□□□ -0.62
TP53-225ENST00000619485 TRMT1LQ7Z2T5 733 aaKnown RBP11.17□□□□□ -0.62
TP53-225ENST00000619485 EIF1ADQ8N9N8 165 aaKnown RBP11.17□□□□□ -0.62
TP53-225ENST00000619485 NEK9Q8TD19 979 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 ATP8B4Q8TF62 1192 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 RFFLQ8WZ73 363 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 SGSM3Q96HU1 749 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 CCDC17Q96LX7 622 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 AGBL1Q96MI9 1066 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 PRMT1Q99873 361 aaKnown RBP11.17□□□□□ -0.62
TP53-225ENST00000619485 WDR18Q9BV38 432 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 CTTNBP2NLQ9P2B4 639 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 CD2APQ9Y5K6 639 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 ZNF541Q9H0D2 1346 aa11.17□□□□□ -0.62
TP53-225ENST00000619485 ENTPD3O75355 529 aa11.16□□□□□ -0.62
TP53-225ENST00000619485 ZBTB48P10074 688 aaPredicted RBP11.16□□□□□ -0.62
TP53-225ENST00000619485 LMNB1P20700 586 aa11.16□□□□□ -0.62
TP53-225ENST00000619485 RPA1P27694 616 aa11.16□□□□□ -0.62
TP53-225ENST00000619485 BYSLQ13895 437 aaKnown RBP11.16□□□□□ -0.62
TP53-225ENST00000619485 SLC29A2Q14542 456 aa11.16□□□□□ -0.62
TP53-225ENST00000619485 RASA3Q14644 834 aa11.16□□□□□ -0.62
TP53-225ENST00000619485 PLCB4Q15147 1175 aa11.16□□□□□ -0.62
TP53-225ENST00000619485 HIBCHQ6NVY1 386 aaPredicted RBP11.16□□□□□ -0.62
TP53-225ENST00000619485 OTUD6AQ7L8S5 288 aa11.16□□□□□ -0.62
TP53-225ENST00000619485 SLFN11Q7Z7L1 901 aa11.16□□□□□ -0.62
TP53-225ENST00000619485 ZC3H3Q8IXZ2 948 aaKnown RBP11.16□□□□□ -0.62
TP53-225ENST00000619485 NIM1KQ8IY84 436 aa11.16□□□□□ -0.62
TP53-225ENST00000619485 ANKS4BQ8N8V4 417 aa11.16□□□□□ -0.62
TP53-225ENST00000619485 ETNPPLQ8TBG4 499 aa11.16□□□□□ -0.62
TP53-225ENST00000619485 DCAF4Q8WV16 495 aa11.16□□□□□ -0.62
TP53-225ENST00000619485 ALG3Q92685 438 aa11.16□□□□□ -0.62
TP53-225ENST00000619485 N4BP2L2Q92802 583 aaPredicted RBP11.16□□□□□ -0.62
TP53-225ENST00000619485 NAP1L4Q99733 375 aaKnown RBP11.16□□□□□ -0.62
TP53-225ENST00000619485 ERP44Q9BS26 406 aa11.16□□□□□ -0.62
TP53-225ENST00000619485 MRIQ9BWK5 157 aa11.16□□□□□ -0.62
TP53-225ENST00000619485 BAIAP2L1Q9UHR4 511 aa11.16□□□□□ -0.62
TP53-225ENST00000619485 SH3BP1Q9Y3L3 701 aa11.16□□□□□ -0.62
TP53-225ENST00000619485 KIF13BQ9NQT8 1826 aa11.16□□□□□ -0.62
TP53-225ENST00000619485 ATMINO43313 823 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms